BLASTX nr result

ID: Panax21_contig00003709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003709
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311347.1| predicted protein [Populus trichocarpa] gi|1...   110   3e-22
ref|XP_002512065.1| SP1L, putative [Ricinus communis] gi|2235492...   109   5e-22
ref|XP_002316083.1| predicted protein [Populus trichocarpa] gi|1...   108   2e-21
gb|AAU05601.1| hypothetical protein [Fragaria x ananassa]             103   5e-20
ref|XP_002267630.1| PREDICTED: uncharacterized protein LOC100245...   100   3e-19

>ref|XP_002311347.1| predicted protein [Populus trichocarpa] gi|118484460|gb|ABK94106.1|
           unknown [Populus trichocarpa]
           gi|118485184|gb|ABK94453.1| unknown [Populus
           trichocarpa] gi|222851167|gb|EEE88714.1| predicted
           protein [Populus trichocarpa]
          Length = 113

 Score =  110 bits (275), Expect = 3e-22
 Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
 Frame = -2

Query: 576 EAPKPSTNNTQATLNEVQPVNHSP--KPRSASEPVDVSKQIPAGINSTTLNNYFRAEGQN 403
           EAPKP TNN QA  +E  P N+ P  KP +A +P D++KQ+PAGINST+ NNY RA+GQN
Sbjct: 22  EAPKPGTNNAQAAPSESLPANNPPPSKPAAAPQPADINKQVPAGINSTSTNNYLRADGQN 81

Query: 402 TGNFLTERPSTKVHAAP 352
           TGNF+T+RPSTKVHAAP
Sbjct: 82  TGNFITDRPSTKVHAAP 98


>ref|XP_002512065.1| SP1L, putative [Ricinus communis] gi|223549245|gb|EEF50734.1| SP1L,
           putative [Ricinus communis]
          Length = 113

 Score =  109 bits (273), Expect = 5e-22
 Identities = 53/77 (68%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
 Frame = -2

Query: 576 EAPKPSTNNTQATLNEVQPVNHSP--KPRSASEPVDVSKQIPAGINSTTLNNYFRAEGQN 403
           EAPKP+  N Q   N+ Q VN  P  KP  AS+PVD+SKQ+PAGINST+ NNY RA+GQN
Sbjct: 22  EAPKPTRKNAQPAPNDAQVVNDLPPSKPAVASQPVDISKQVPAGINSTSTNNYMRADGQN 81

Query: 402 TGNFLTERPSTKVHAAP 352
           TGNFLT+RPSTKVHAAP
Sbjct: 82  TGNFLTDRPSTKVHAAP 98


>ref|XP_002316083.1| predicted protein [Populus trichocarpa] gi|118483990|gb|ABK93882.1|
           unknown [Populus trichocarpa]
           gi|222865123|gb|EEF02254.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score =  108 bits (269), Expect = 2e-21
 Identities = 49/77 (63%), Positives = 63/77 (81%), Gaps = 2/77 (2%)
 Frame = -2

Query: 576 EAPKPSTNNTQATLNEVQPVNHSP--KPRSASEPVDVSKQIPAGINSTTLNNYFRAEGQN 403
           EAPKPSTNN QA  +EVQP ++ P  KP +A +P +++++ PAGINST+ NNY RA+GQN
Sbjct: 22  EAPKPSTNNAQAAPSEVQPASNPPPPKPAAAPQPAEINREFPAGINSTSTNNYLRADGQN 81

Query: 402 TGNFLTERPSTKVHAAP 352
            GNF+T+RPSTKVHAAP
Sbjct: 82  AGNFITDRPSTKVHAAP 98


>gb|AAU05601.1| hypothetical protein [Fragaria x ananassa]
          Length = 140

 Score =  103 bits (256), Expect = 5e-20
 Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
 Frame = -2

Query: 570 PKPSTNNTQATLNEVQPVNH-SPKPRSAS-----EPVDVSKQIPAGINSTTLNNYFRAEG 409
           PKP TNN QA   EVQ VN  +PKP ++      EPVD++KQIPAGI+ST+ NNY RA+G
Sbjct: 46  PKPRTNNVQAAPKEVQAVNEPTPKPTASPPPPKPEPVDITKQIPAGIHSTSTNNYMRADG 105

Query: 408 QNTGNFLTERPSTKVHAAP 352
           QNTGNF+T+RPSTKVH+AP
Sbjct: 106 QNTGNFITDRPSTKVHSAP 124


>ref|XP_002267630.1| PREDICTED: uncharacterized protein LOC100245217 isoform 3 [Vitis
           vinifera] gi|225455143|ref|XP_002267545.1| PREDICTED:
           uncharacterized protein LOC100245217 isoform 1 [Vitis
           vinifera] gi|302144019|emb|CBI23124.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  100 bits (249), Expect = 3e-19
 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
 Frame = -2

Query: 576 EAPKPSTNNTQATLNEVQPVNH--SPKPRSASEPVDVSKQIPAGINSTTLNNYFRAEGQN 403
           EAPKP++NN     +E   VN+  SPKP + ++PVDV+KQIPAGI+    NNY+RA+GQN
Sbjct: 22  EAPKPASNNAPVPPSEAPAVNNGPSPKPTAPAQPVDVTKQIPAGIHGNLANNYYRADGQN 81

Query: 402 TGNFLTERPSTKVHAAP 352
            GNF+T+RPSTKVHAAP
Sbjct: 82  CGNFITDRPSTKVHAAP 98


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