BLASTX nr result
ID: Panax21_contig00003688
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00003688
(1796 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin... 457 e-126
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin... 445 e-122
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin... 435 e-119
ref|XP_002511264.1| nucleic acid binding protein, putative [Rici... 432 e-118
ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containin... 424 e-116
>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
protein product [Vitis vinifera]
Length = 484
Score = 457 bits (1175), Expect = e-126
Identities = 212/350 (60%), Positives = 258/350 (73%), Gaps = 22/350 (6%)
Frame = -1
Query: 986 DERSENEQDDEGSNGYGNVEG------------DTLGLKEGKHRRYHYPLRPDAEDCSFY 843
+ER E +++DE S+ G V+ D K+ K R+ YP+RPDA DCSFY
Sbjct: 79 EEREEEKEEDEESDSNGEVKASDDEEEQCENLEDESAAKDDKSARFQYPVRPDAVDCSFY 138
Query: 842 TRTGTCKFGSNCKFNHPLRRRNQAAKETLKQKEENS--NRLGQTECKYYSTSGGCKYGNA 669
RTGTCKFGSNCKFNHP+RR+NQ AKE +K+KE+ R GQTECKYY +GGCK+G A
Sbjct: 139 LRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKA 198
Query: 668 CRYNHSRGKSVVAPILEFNFLGLPIRQGEKECPYYMRNGSCKYGSNCRFNHPDPTAVGGG 489
CRYNH++ K P+LE NFLGLPIR GEKECPYYMR GSCKYG+NCRFNHPDPTA GG
Sbjct: 199 CRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGY 258
Query: 488 DPLSGYGDSS---VQGGLKDNISGWSSARLVNENAPFMPLMYPPTPGAPPKS-EWNGYQA 321
+ SGYG+ +QG + N++ WSS R +NE APF+P+M+ PT G PP + EWNGYQA
Sbjct: 259 ESPSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQA 318
Query: 320 PVY--PMSERSLPTPPAFSMNFPASDAKFYSQHQQQM--LLEEYPERPGQPECSYFMKTG 153
P+Y P ERS+ PPAF +N A+DA Y HQQQ L+E++PERPGQPECSYF+KTG
Sbjct: 319 PLYPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTG 378
Query: 152 DCKYRSGCKFHHPKNGNPKTSSFAVSDQGLPLRPDQNICTHYSRYGICKF 3
DCK+R+ CK+HHPKN PK+ +SD+GLPLRPDQNICTHY+RYGICKF
Sbjct: 379 DCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKF 428
Score = 76.6 bits (187), Expect = 2e-11
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Frame = -1
Query: 746 EENSNRLGQTECKYYSTSGGCKYGNACRYNHSRGKSVVAPILEFNFLGLPIRQGEKECPY 567
E+ R GQ EC Y+ +G CK+ AC+Y+H + + +P + GLP+R + C +
Sbjct: 360 EDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTH 419
Query: 566 YMRNGSCKYGSNCRFNHP--------DPTAVGGGDPLSGYGDSSVQGGLK 441
Y R G CK+G C+F+HP P+A G D +G S G++
Sbjct: 420 YNRYGICKFGPACKFDHPVNYGNSASAPSAESGQDQPPPFGGSVTADGVR 469
>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
[Vitis vinifera]
Length = 481
Score = 445 bits (1145), Expect = e-122
Identities = 207/348 (59%), Positives = 255/348 (73%), Gaps = 20/348 (5%)
Frame = -1
Query: 986 DERSENEQDDEGSNGYGNVEG------------DTLGLKEGKHRRYHYPLRPDAEDCSFY 843
+ER E +++DE S+ G V+ D K+ K R+ YP+RPDA DCSFY
Sbjct: 79 EEREEEKEEDEESDSNGEVKASDDEEEQCENLEDESAAKDDKSARFQYPVRPDAVDCSFY 138
Query: 842 TRTGTCKFGSNCKFNHPLRRRNQAAKETLKQKEENS--NRLGQTECKYYSTSGGCKYGNA 669
RTGTCKFGSNCKFNHP+RR+NQ AKE +K+KE+ R GQTECKYY +GGCK+G A
Sbjct: 139 LRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKA 198
Query: 668 CRYNHSRGKSVVAPILEFNFLGLPIRQGEKECPYYMRNGSCKYGSNCRFNHPDPTAVGGG 489
CRYNH++ K P+LE NFLGLPIR GEKECPYYMR GSCKYG+NCRFNHPDPTA GG
Sbjct: 199 CRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGY 258
Query: 488 DPLSGYGDSS---VQGGLKDNISGWSSARLVNENAPFMPLMYPPTPGAPPKS-EWNGYQA 321
+ SGYG+ +QG + N++ WSS R +NE APF+P+M+ PT G PP + EWNGYQ
Sbjct: 259 ESPSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQV 318
Query: 320 PVYPMSERSLPTPPAFSMNFPASDAKFYSQHQQQM--LLEEYPERPGQPECSYFMKTGDC 147
+ + +RS+ PPAF +N A+DA Y HQQQ L+E++PERPGQPECSYF+KTGDC
Sbjct: 319 FML-LLKRSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDC 377
Query: 146 KYRSGCKFHHPKNGNPKTSSFAVSDQGLPLRPDQNICTHYSRYGICKF 3
K+R+ CK+HHPKN PK+ +SD+GLPLRPDQNICTHY+RYGICKF
Sbjct: 378 KFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKF 425
Score = 76.6 bits (187), Expect = 2e-11
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Frame = -1
Query: 746 EENSNRLGQTECKYYSTSGGCKYGNACRYNHSRGKSVVAPILEFNFLGLPIRQGEKECPY 567
E+ R GQ EC Y+ +G CK+ AC+Y+H + + +P + GLP+R + C +
Sbjct: 357 EDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTH 416
Query: 566 YMRNGSCKYGSNCRFNHP--------DPTAVGGGDPLSGYGDSSVQGGLK 441
Y R G CK+G C+F+HP P+A G D +G S G++
Sbjct: 417 YNRYGICKFGPACKFDHPVNYGNSASAPSAESGQDQPPPFGGSVTADGVR 466
>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 570
Score = 435 bits (1119), Expect = e-119
Identities = 207/344 (60%), Positives = 249/344 (72%), Gaps = 24/344 (6%)
Frame = -1
Query: 962 DDEGSNGYGN------------------VEGDTLGLK--EGKHRRYHYPLRPDAEDCSFY 843
DD+G NG G+ V GD G+K R YPLRP+AEDC+FY
Sbjct: 183 DDDGWNGGGDEGCDCIENVNVNESESDKVGGDVEGVKGERSSGRAQQYPLRPEAEDCAFY 242
Query: 842 TRTGTCKFGSNCKFNHPLRRRNQAAKETLKQKEENSNRLGQTECKYYSTSGGCKYGNACR 663
+TGTCKFG NCKFNHPLRR+NQA KE ++EE + R GQ ECKYY SGGCK+G AC+
Sbjct: 243 LKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQMECKYYLRSGGCKFGKACK 302
Query: 662 YNHSRGKSVVAPILEFNFLGLPIRQGEKECPYYMRNGSCKYGSNCRFNHPDPTAVGGGDP 483
+NH+RGKS A E NFLGLPIR GEKEC YYMR GSCK+G+NCRFNHPDPT VGGGD
Sbjct: 303 FNHTRGKSSSASATELNFLGLPIRVGEKECLYYMRTGSCKFGANCRFNHPDPTTVGGGDS 362
Query: 482 LSGYGDS---SVQGGLKDNISGWSSARLVNENAPFMPLMYPPTPG-APPKSEWNGYQAPV 315
SGYG+ S+QG + +IS WSS R +NE+APF+P++ P PG +P SEWNGYQAPV
Sbjct: 363 PSGYGNGSSISLQGVSQSSISSWSSTRPLNESAPFVPVILSPNPGVSPQSSEWNGYQAPV 422
Query: 314 YPMSERSLPTPPAFSMNFPASDAKFYSQHQQQMLLEEYPERPGQPECSYFMKTGDCKYRS 135
Y +SERSL P + MN PA ++ Y HQ+QML+EE+PERPG+PECSYF+KTGDCK++S
Sbjct: 423 Y-LSERSLHPPSTYVMNNPAMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKFKS 481
Query: 134 GCKFHHPKNGNPKTSSFAVSDQGLPLRPDQNICTHYSRYGICKF 3
CKFHHPKN + +SD+GLPLRPDQN+CT+Y RYGICKF
Sbjct: 482 NCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTYYRRYGICKF 525
Score = 84.7 bits (208), Expect = 7e-14
Identities = 35/96 (36%), Positives = 56/96 (58%)
Frame = -1
Query: 746 EENSNRLGQTECKYYSTSGGCKYGNACRYNHSRGKSVVAPILEFNFLGLPIRQGEKECPY 567
EE R G+ EC Y+ +G CK+ + C+++H + + P+ + GLP+R + C Y
Sbjct: 457 EEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTY 516
Query: 566 YMRNGSCKYGSNCRFNHPDPTAVGGGDPLSGYGDSS 459
Y R G CK+G C+F+HP P+ + G D S Y +S+
Sbjct: 517 YRRYGICKFGPACKFDHPAPSTMAGHDQQSTYINSA 552
>ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223550379|gb|EEF51866.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 495
Score = 432 bits (1111), Expect = e-118
Identities = 209/399 (52%), Positives = 273/399 (68%), Gaps = 12/399 (3%)
Frame = -1
Query: 1163 KWSEIEIENDHGNDNMK--VNEEEQGIIDKYENNWSVPENGEDDARRIEANEEQGIFSKY 990
K E++ E+D ++ K + + + E+N GE++ N +
Sbjct: 60 KLEEVDKEDDFDDEGEKDSIGWHQDDGFNSGESN-----GGEEEQEYNINNNDYDKVGND 114
Query: 989 EDERSENEQDDEGSNGYGNVEGDTLGLKEGKHRRYHYPLRPDAEDCSFYTRTGTCKFGSN 810
+D+ + E+ DE SN N +H +Y YP+RP+AEDCS+Y +TGTCKFGSN
Sbjct: 115 DDDDDDVEKKDERSNNGVN----------RRHNQYQYPVRPEAEDCSYYMKTGTCKFGSN 164
Query: 809 CKFNHPLRRRNQAAKETLKQKEENSNRLGQTECKYYSTSGGCKYGNACRYNHSR------ 648
CKFNHP++R+ Q +KE +K++EE ++R GQTECKYY +GGCKYG ACRYNHSR
Sbjct: 165 CKFNHPVKRKMQVSKEKVKEREEATDRPGQTECKYYLRTGGCKYGKACRYNHSRAKPLLL 224
Query: 647 -GKSVVAPILEFNFLGLPIRQGEKECPYYMRNGSCKYGSNCRFNHPDPTAVGGGDPL--S 477
K+ V P L+ NFLGLPIR GE+ECPYYMRNGSCKYG+NCRFNHPDPT VGG DPL S
Sbjct: 225 QAKTAVFPALDLNFLGLPIRPGERECPYYMRNGSCKYGANCRFNHPDPTTVGGSDPLAFS 284
Query: 476 GYGDSSVQGGLKDNISGWSSARLVNENAPFMPLMYPPTPGAPPKS-EWNGYQAPVYPMSE 300
G +S+Q L+ NI+ WSS +NE FM +M+ PT G P ++ EWNGYQ +P+ E
Sbjct: 285 NGGSASLQNSLQSNIASWSSPGGLNETPSFMSIMFSPTQGVPSQNPEWNGYQVCYFPLYE 344
Query: 299 RSLPTPPAFSMNFPASDAKFYSQHQQQMLLEEYPERPGQPECSYFMKTGDCKYRSGCKFH 120
RS+ PPA+ ++ PA+D Y+ HQQQ+ +EE+PERPGQPECSYFMKTGDCK++S CK+H
Sbjct: 345 RSMHQPPAYVISNPATDTNVYA-HQQQIQVEEFPERPGQPECSYFMKTGDCKFKSNCKYH 403
Query: 119 HPKNGNPKTSSFAVSDQGLPLRPDQNICTHYSRYGICKF 3
HPKN K+ +SD+GLPLRP QNIC++YSRYGICKF
Sbjct: 404 HPKNHISKSPPCVLSDKGLPLRPGQNICSYYSRYGICKF 442
Score = 82.4 bits (202), Expect = 4e-13
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Frame = -1
Query: 800 NHPLRRRNQAAKETLKQKEENSNRLGQTECKYYSTSGGCKYGNACRYNHSRGKSVVAPIL 621
++P N A + Q EE R GQ EC Y+ +G CK+ + C+Y+H + +P
Sbjct: 356 SNPATDTNVYAHQQQIQVEEFPERPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPC 415
Query: 620 EFNFLGLPIRQGEKECPYYMRNGSCKYGSNCRFNHP----DPTAVGGGDPLSGYGDSSVQ 453
+ GLP+R G+ C YY R G CK+G C+F+HP T D + DS +
Sbjct: 416 VLSDKGLPLRPGQNICSYYSRYGICKFGPACKFDHPIQPVSSTTGSADDVRMPFSDSGTK 475
Query: 452 GGLKDNISGWSS 417
K +SG +S
Sbjct: 476 EEAKMALSGNAS 487
>ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 490
Score = 424 bits (1091), Expect = e-116
Identities = 208/392 (53%), Positives = 275/392 (70%), Gaps = 18/392 (4%)
Frame = -1
Query: 1124 DNMKVNEEEQGIIDKYENNWSVPEN---GEDDARRIEAN---EEQGIFSKYEDERSENEQ 963
D V+E E+ + D + E G+ D++ E N EE G+ D + +
Sbjct: 54 DLKDVDESEEKVSDFNDGGGVCDEETGKGDGDSKGWETNSWNEEVGV-----DVDVDGDG 108
Query: 962 DDEGSNGY-GNVEGDT-LGLKEGKHR--RYHYPLRPDAEDCSFYTRTGTCKFGSNCKFNH 795
D +G + G+V+GD + KEG++ +HYPLRP+AEDC+FY +TG CKFG NCKFNH
Sbjct: 109 DGDGDDDVDGDVDGDDEVEKKEGRNSGGTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNH 168
Query: 794 PLRRRNQAAKETLKQKEENSNRLGQTECKYYSTSGGCKYGNACRYNHSRGK--SVVAPIL 621
P++R++QA KE ++EE + R G TECKYY SGGCK+G +C+YNH+RGK + AP+L
Sbjct: 169 PIKRKSQAVKEKAGEREETTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLL 228
Query: 620 EFNFLGLPIRQGEKECPYYMRNGSCKYGSNCRFNHPDPTAVGGG--DPLSGYGDS---SV 456
E NFLGLPIR GE+ECPYYMR GSCK+G+NC+FNHPDPTAVGGG +P SGYG+ S+
Sbjct: 229 ELNFLGLPIRPGERECPYYMRTGSCKFGANCKFNHPDPTAVGGGGGNPPSGYGNGGSISL 288
Query: 455 QGGLKDNISGWSSARLVNENAPFMPLMYPPTPGAPPKS-EWNGYQAPVYPMSERSLPTPP 279
QG + ++ WSS R +NE +PF+P+M PT G +S +WNGYQA VY + ERS+ P
Sbjct: 289 QGVSQTSVPSWSSPRTLNEASPFVPMMLSPTQGVSTQSSDWNGYQASVY-LPERSIHPPS 347
Query: 278 AFSMNFPASDAKFYSQHQQQMLLEEYPERPGQPECSYFMKTGDCKYRSGCKFHHPKNGNP 99
F MN PA D Y HQ+QM ++E+PERPG+PECS+F+KTGDCK++S CKFHHPKN
Sbjct: 348 TFVMNNPAIDTNVYMHHQKQMPVDEFPERPGEPECSFFLKTGDCKFKSNCKFHHPKNRVT 407
Query: 98 KTSSFAVSDQGLPLRPDQNICTHYSRYGICKF 3
+ +SD+GLPLRPDQ++C+HYSRYGICKF
Sbjct: 408 RLPPCNLSDKGLPLRPDQSVCSHYSRYGICKF 439
Score = 69.3 bits (168), Expect = 3e-09
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = -1
Query: 746 EENSNRLGQTECKYYSTSGGCKYGNACRYNHSRGKSVVAPILEFNFLGLPIRQGEKECPY 567
+E R G+ EC ++ +G CK+ + C+++H + + P + GLP+R + C +
Sbjct: 371 DEFPERPGEPECSFFLKTGDCKFKSNCKFHHPKNRVTRLPPCNLSDKGLPLRPDQSVCSH 430
Query: 566 YMRNGSCKYGSNCRFNHP---DPTAVGGGDPLSGYGDSSVQG 450
Y R G CK+G C+F+HP P + G + S Y +S+ G
Sbjct: 431 YSRYGICKFGPACKFDHPINLQPVMIPGLEQQS-YSNSASAG 471