BLASTX nr result

ID: Panax21_contig00003680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003680
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFE88173.1| g-thionin [Panax ginseng]                              115   5e-24
ref|XP_002513755.1| Low-molecular-weight cysteine-rich protein L...    82   7e-14
ref|NP_001240040.1| uncharacterized protein LOC100787787 [Glycin...    77   2e-12
gb|ACU13843.1| unknown [Glycine max]                                   77   2e-12
gb|AFH74424.1| defensin [Malus x domestica]                            75   7e-12

>gb|AFE88173.1| g-thionin [Panax ginseng]
          Length = 75

 Score =  115 bits (289), Expect = 5e-24
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = -2

Query: 476 MGVLMRLFTTIFMVLMLLMATGLEPAEGRTCESQSHKFKGTCASGTNCANVCKTE 312
           MGVLMRLFTTIFMVLMLLMATGLEPAEGRTCESQSHKFKGTCASGTNCANVCKTE
Sbjct: 1   MGVLMRLFTTIFMVLMLLMATGLEPAEGRTCESQSHKFKGTCASGTNCANVCKTE 55


>ref|XP_002513755.1| Low-molecular-weight cysteine-rich protein LCR69 precursor,
           putative [Ricinus communis] gi|223546841|gb|EEF48338.1|
           Low-molecular-weight cysteine-rich protein LCR69
           precursor, putative [Ricinus communis]
          Length = 77

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 38/53 (71%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
 Frame = -2

Query: 464 MRLFTTIFMVLMLLMAT--GLEPAEGRTCESQSHKFKGTCASGTNCANVCKTE 312
           MRLF+T+F++L+LL+AT  G + AE RTCESQSHKFKGTC S TNCAN+CKTE
Sbjct: 5   MRLFSTVFLLLLLLVATEMGAKVAEARTCESQSHKFKGTCLSTTNCANICKTE 57


>ref|NP_001240040.1| uncharacterized protein LOC100787787 [Glycine max]
           gi|255647983|gb|ACU24448.1| unknown [Glycine max]
          Length = 90

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/49 (75%), Positives = 38/49 (77%)
 Frame = +1

Query: 253 QCVVQKQRRRKPLHLPPGKPSVLQTLAQLVPLAHVPLNLWLCDSHVLPS 399
           Q +VQKQRRRKPLHLPP KPS LQT AQL  L H P N WLCDSH LPS
Sbjct: 5   QILVQKQRRRKPLHLPPEKPSFLQTKAQLWSLLHKPWNPWLCDSHTLPS 53


>gb|ACU13843.1| unknown [Glycine max]
          Length = 90

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/49 (75%), Positives = 38/49 (77%)
 Frame = +1

Query: 253 QCVVQKQRRRKPLHLPPGKPSVLQTLAQLVPLAHVPLNLWLCDSHVLPS 399
           Q +VQKQRRRKPLHLPP KPS LQT AQL  L H P N WLCDSH LPS
Sbjct: 5   QILVQKQRRRKPLHLPPEKPSFLQTKAQLWSLLHKPWNPWLCDSHTLPS 53


>gb|AFH74424.1| defensin [Malus x domestica]
          Length = 75

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = -2

Query: 464 MRLFTTIFMVLMLLMATGLEPAEGRTCESQSHKFKGTCASGTNCANVCKTE 312
           MRLF T F+ L+LL+ATG   AEGRTCESQS++FKGTC S +NCA VC+TE
Sbjct: 5   MRLFPTAFVFLLLLVATGTMVAEGRTCESQSNRFKGTCVSKSNCAAVCQTE 55


Top