BLASTX nr result

ID: Panax21_contig00003672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003672
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283197.1| PREDICTED: cyclin-B1-2 [Vitis vinifera] gi|2...   233   3e-59
ref|XP_004141496.1| PREDICTED: cyclin-B1-2-like [Cucumis sativus]     228   7e-58
emb|CAN69726.1| hypothetical protein VITISV_009153 [Vitis vinifera]   228   1e-57
ref|NP_001190435.1| protein acclimation of photosynthesis to env...   217   2e-54
gb|AFK46972.1| unknown [Lotus japonicus]                              215   6e-54

>ref|XP_002283197.1| PREDICTED: cyclin-B1-2 [Vitis vinifera]
           gi|298204380|emb|CBI16860.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  233 bits (594), Expect = 3e-59
 Identities = 111/141 (78%), Positives = 128/141 (90%)
 Frame = +3

Query: 57  MEAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASLRQEEMKRKILANTYG 236
           MEAPKTI  EIGG++NDALRFGLQGVKS+IVGSHPLESAY S    QE MKRKILANTYG
Sbjct: 1   MEAPKTIAHEIGGVRNDALRFGLQGVKSDIVGSHPLESAYQSQREIQEGMKRKILANTYG 60

Query: 237 SAFPLKMELDRKILSRFQRPPGAIPSSVLGLESMTGALENFGVEDYLNDPRDSETLRPAD 416
           +AFPLKM+LD +ILSRFQRPPGAIPSS+LGLE++TG+L+NFG EDYL+DP DSET RPAD
Sbjct: 61  TAFPLKMDLDAQILSRFQRPPGAIPSSMLGLEALTGSLDNFGFEDYLSDPCDSETFRPAD 120

Query: 417 MHHGLEVRFGLSRGPVCPSFM 479
           MHHG+EVR G+S+GP+CPSF+
Sbjct: 121 MHHGMEVRHGISKGPICPSFI 141


>ref|XP_004141496.1| PREDICTED: cyclin-B1-2-like [Cucumis sativus]
          Length = 141

 Score =  228 bits (582), Expect = 7e-58
 Identities = 106/141 (75%), Positives = 126/141 (89%)
 Frame = +3

Query: 57  MEAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASLRQEEMKRKILANTYG 236
           ME+ K I  EIGG++NDALRFGLQGVKS++VGSHP+ES Y +    QEEMKRK+L NTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 237 SAFPLKMELDRKILSRFQRPPGAIPSSVLGLESMTGALENFGVEDYLNDPRDSETLRPAD 416
           SAFPLKM+LDR+ILSRFQRPPG IPSS+LGLE++TG+L++FG EDYLNDPR+SE+LRP D
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 417 MHHGLEVRFGLSRGPVCPSFM 479
           MHHG+EVR GLS+GPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141


>emb|CAN69726.1| hypothetical protein VITISV_009153 [Vitis vinifera]
          Length = 141

 Score =  228 bits (580), Expect = 1e-57
 Identities = 109/141 (77%), Positives = 125/141 (88%)
 Frame = +3

Query: 57  MEAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASLRQEEMKRKILANTYG 236
           MEAPKTI  EIGG++NDALRFGLQGVKS+IVGSHPLESAY S    QE MKR ILANTYG
Sbjct: 1   MEAPKTIAHEIGGVRNDALRFGLQGVKSDIVGSHPLESAYQSQREIQEGMKRXILANTYG 60

Query: 237 SAFPLKMELDRKILSRFQRPPGAIPSSVLGLESMTGALENFGVEDYLNDPRDSETLRPAD 416
           +AFPLKM+LD +ILSRFQRPPGAIPSS+LGLE++TG+L+NFG EDYL DP DSE  RPAD
Sbjct: 61  TAFPLKMDLDAQILSRFQRPPGAIPSSMLGLEALTGSLDNFGFEDYLXDPCDSEXFRPAD 120

Query: 417 MHHGLEVRFGLSRGPVCPSFM 479
           MHHG+EVR G+S+GP+CPSF+
Sbjct: 121 MHHGMEVRXGISKGPICPSFI 141


>ref|NP_001190435.1| protein acclimation of photosynthesis to environment [Arabidopsis
           thaliana] gi|332006963|gb|AED94346.1| protein
           acclimation of photosynthesis to environment
           [Arabidopsis thaliana]
          Length = 431

 Score =  217 bits (553), Expect = 2e-54
 Identities = 105/153 (68%), Positives = 124/153 (81%)
 Frame = +3

Query: 21  KNQRGESERE*IMEAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASLRQE 200
           K +RG  E    ME+ K I  EIGG+KNDALRFGL GVKS+I+ SHPLE+AY S    QE
Sbjct: 283 KKRRGRGE----MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQE 338

Query: 201 EMKRKILANTYGSAFPLKMELDRKILSRFQRPPGAIPSSVLGLESMTGALENFGVEDYLN 380
           EMKR+++ +TYG+A PLKM+LDR+ILSRFQRPPG IPSS+LGLE  TGAL+NFG EDYLN
Sbjct: 339 EMKRRVITHTYGAALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLN 398

Query: 381 DPRDSETLRPADMHHGLEVRFGLSRGPVCPSFM 479
           DPR+SETL+P D HHG+EVR GLS+GP  PSFM
Sbjct: 399 DPRESETLKPVDFHHGMEVRLGLSKGPASPSFM 431


>gb|AFK46972.1| unknown [Lotus japonicus]
          Length = 142

 Score =  215 bits (548), Expect = 6e-54
 Identities = 102/140 (72%), Positives = 123/140 (87%)
 Frame = +3

Query: 60  EAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASLRQEEMKRKILANTYGS 239
           EA K+I  +IGG++NDALRFGLQGVKS+IVGSHPL+SA  SAS   E MKR+ + N YG+
Sbjct: 3   EAAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLYGA 62

Query: 240 AFPLKMELDRKILSRFQRPPGAIPSSVLGLESMTGALENFGVEDYLNDPRDSETLRPADM 419
           AFPLKM+LDR+ILSRFQRP GAIPSS+LGLE+ TG+L++FG EDYL+DPR+SET+RP DM
Sbjct: 63  AFPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPLDM 122

Query: 420 HHGLEVRFGLSRGPVCPSFM 479
           HHG+EVR GLS+GPVCPSFM
Sbjct: 123 HHGMEVRLGLSKGPVCPSFM 142


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