BLASTX nr result

ID: Panax21_contig00003671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003671
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283197.1| PREDICTED: cyclin-B1-2 [Vitis vinifera] gi|2...   225   8e-57
ref|XP_004141496.1| PREDICTED: cyclin-B1-2-like [Cucumis sativus]     221   2e-55
emb|CAN69726.1| hypothetical protein VITISV_009153 [Vitis vinifera]   221   2e-55
ref|NP_001190435.1| protein acclimation of photosynthesis to env...   210   3e-52
gb|AFK46972.1| unknown [Lotus japonicus]                              208   1e-51

>ref|XP_002283197.1| PREDICTED: cyclin-B1-2 [Vitis vinifera]
           gi|298204380|emb|CBI16860.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  225 bits (574), Expect = 8e-57
 Identities = 110/141 (78%), Positives = 126/141 (89%), Gaps = 3/141 (2%)
 Frame = +3

Query: 192 MEAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASTRQEEMKRKILANTYG 371
           MEAPKTI  EIGG++NDALRFGLQGVKS+IVGSHPLESAY S    QE MKRKILANTYG
Sbjct: 1   MEAPKTIAHEIGGVRNDALRFGLQGVKSDIVGSHPLESAYQSQREIQEGMKRKILANTYG 60

Query: 372 SAFPLKMELDRKILSRFQRPPGAIPSSMLGLESMTGALENFGVEDYLN---DSETLRPAD 542
           +AFPLKM+LD +ILSRFQRPPGAIPSSMLGLE++TG+L+NFG EDYL+   DSET RPAD
Sbjct: 61  TAFPLKMDLDAQILSRFQRPPGAIPSSMLGLEALTGSLDNFGFEDYLSDPCDSETFRPAD 120

Query: 543 MHHGLEVRLGLSRGPVCPSFM 605
           MHHG+EVR G+S+GP+CPSF+
Sbjct: 121 MHHGMEVRHGISKGPICPSFI 141


>ref|XP_004141496.1| PREDICTED: cyclin-B1-2-like [Cucumis sativus]
          Length = 141

 Score =  221 bits (563), Expect = 2e-55
 Identities = 106/141 (75%), Positives = 124/141 (87%), Gaps = 3/141 (2%)
 Frame = +3

Query: 192 MEAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASTRQEEMKRKILANTYG 371
           ME+ K I  EIGG++NDALRFGLQGVKS++VGSHP+ES Y +    QEEMKRK+L NTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 372 SAFPLKMELDRKILSRFQRPPGAIPSSMLGLESMTGALENFGVEDYLND---SETLRPAD 542
           SAFPLKM+LDR+ILSRFQRPPG IPSSMLGLE++TG+L++FG EDYLND   SE+LRP D
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 543 MHHGLEVRLGLSRGPVCPSFM 605
           MHHG+EVRLGLS+GPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141


>emb|CAN69726.1| hypothetical protein VITISV_009153 [Vitis vinifera]
          Length = 141

 Score =  221 bits (562), Expect = 2e-55
 Identities = 108/141 (76%), Positives = 123/141 (87%), Gaps = 3/141 (2%)
 Frame = +3

Query: 192 MEAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASTRQEEMKRKILANTYG 371
           MEAPKTI  EIGG++NDALRFGLQGVKS+IVGSHPLESAY S    QE MKR ILANTYG
Sbjct: 1   MEAPKTIAHEIGGVRNDALRFGLQGVKSDIVGSHPLESAYQSQREIQEGMKRXILANTYG 60

Query: 372 SAFPLKMELDRKILSRFQRPPGAIPSSMLGLESMTGALENFGVEDYLN---DSETLRPAD 542
           +AFPLKM+LD +ILSRFQRPPGAIPSSMLGLE++TG+L+NFG EDYL    DSE  RPAD
Sbjct: 61  TAFPLKMDLDAQILSRFQRPPGAIPSSMLGLEALTGSLDNFGFEDYLXDPCDSEXFRPAD 120

Query: 543 MHHGLEVRLGLSRGPVCPSFM 605
           MHHG+EVR G+S+GP+CPSF+
Sbjct: 121 MHHGMEVRXGISKGPICPSFI 141


>ref|NP_001190435.1| protein acclimation of photosynthesis to environment [Arabidopsis
           thaliana] gi|332006963|gb|AED94346.1| protein
           acclimation of photosynthesis to environment
           [Arabidopsis thaliana]
          Length = 431

 Score =  210 bits (535), Expect = 3e-52
 Identities = 105/154 (68%), Positives = 123/154 (79%), Gaps = 3/154 (1%)
 Frame = +3

Query: 153 KQNQRGESERE*IMEAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASTRQ 332
           K+ +RG  E    ME+ K I  EIGG+KNDALRFGL GVKS+I+ SHPLE+AY S    Q
Sbjct: 282 KKKRRGRGE----MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQ 337

Query: 333 EEMKRKILANTYGSAFPLKMELDRKILSRFQRPPGAIPSSMLGLESMTGALENFGVEDYL 512
           EEMKR+++ +TYG+A PLKM+LDR+ILSRFQRPPG IPSSMLGLE  TGAL+NFG EDYL
Sbjct: 338 EEMKRRVITHTYGAALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYL 397

Query: 513 ND---SETLRPADMHHGLEVRLGLSRGPVCPSFM 605
           ND   SETL+P D HHG+EVRLGLS+GP  PSFM
Sbjct: 398 NDPRESETLKPVDFHHGMEVRLGLSKGPASPSFM 431


>gb|AFK46972.1| unknown [Lotus japonicus]
          Length = 142

 Score =  208 bits (529), Expect = 1e-51
 Identities = 102/140 (72%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
 Frame = +3

Query: 195 EAPKTIEQEIGGLKNDALRFGLQGVKSEIVGSHPLESAYHSASTRQEEMKRKILANTYGS 374
           EA K+I  +IGG++NDALRFGLQGVKS+IVGSHPL+SA  SAS   E MKR+ + N YG+
Sbjct: 3   EAAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLYGA 62

Query: 375 AFPLKMELDRKILSRFQRPPGAIPSSMLGLESMTGALENFGVEDYLND---SETLRPADM 545
           AFPLKM+LDR+ILSRFQRP GAIPSSMLGLE+ TG+L++FG EDYL+D   SET+RP DM
Sbjct: 63  AFPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPLDM 122

Query: 546 HHGLEVRLGLSRGPVCPSFM 605
           HHG+EVRLGLS+GPVCPSFM
Sbjct: 123 HHGMEVRLGLSKGPVCPSFM 142


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