BLASTX nr result

ID: Panax21_contig00003668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003668
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223...   376   e-102
ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifer...   375   e-101
ref|XP_003546376.1| PREDICTED: cullin-1-like [Glycine max]            373   e-101
ref|XP_002314453.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
ref|XP_003550218.1| PREDICTED: cullin-1-like isoform 2 [Glycine ...   372   e-100

>ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223543987|gb|EEF45513.1|
            Cullin-1, putative [Ricinus communis]
          Length = 744

 Score =  376 bits (965), Expect = e-102
 Identities = 198/270 (73%), Positives = 206/270 (76%)
 Frame = +1

Query: 1    NQSNFEEFLGNNPNVNPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKX 180
            NQ++FEE+L NNPN NPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTK 
Sbjct: 490  NQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKT 549

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTTYQASALLLFNSSDR 360
                                                      IVTTYQASALLLFNSSDR
Sbjct: 550  KHRKLTWIYSLGTCNLIGKFEPKTMEL---------------IVTTYQASALLLFNSSDR 594

Query: 361  LSYQEIMTQLNLSDDDVVRLLHSLSCAKYKILTKEPNTRTISPNDYFEFNSKFTDKMRRI 540
            LSY EIMTQLNL+DDDVVRLLHSLSCAKYKIL KEPNT++ISP DYFEFNSKFTDKMRRI
Sbjct: 595  LSYSEIMTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKSISPTDYFEFNSKFTDKMRRI 654

Query: 541  KIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDV 720
            KIPLPP              RRYAIDASIVRIMKSRKVLG+QQLV+ECVEQLGRMFKPD 
Sbjct: 655  KIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDF 714

Query: 721  KAIKKRIEDLITRDYLERDKDNANLFRYLA 810
            KAIKKRIEDLITRDYLERDKDN NLFRYLA
Sbjct: 715  KAIKKRIEDLITRDYLERDKDNPNLFRYLA 744


>ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifera]
            gi|297736859|emb|CBI26060.3| unnamed protein product
            [Vitis vinifera]
          Length = 744

 Score =  375 bits (964), Expect = e-101
 Identities = 198/270 (73%), Positives = 205/270 (75%)
 Frame = +1

Query: 1    NQSNFEEFLGNNPNVNPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKX 180
            NQ++FEE+L NNPN NPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTK 
Sbjct: 490  NQTHFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKT 549

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTTYQASALLLFNSSDR 360
                                                      IVTTYQASALLLFN+SDR
Sbjct: 550  KHRKLTWIYSLGTCNINGKFEPKTMEL---------------IVTTYQASALLLFNASDR 594

Query: 361  LSYQEIMTQLNLSDDDVVRLLHSLSCAKYKILTKEPNTRTISPNDYFEFNSKFTDKMRRI 540
            LSY EIMTQLNL+DDDVVRLLHSLSCAKYKIL KEPNT+TISP DYFEFNSKFTDKMRRI
Sbjct: 595  LSYSEIMTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDYFEFNSKFTDKMRRI 654

Query: 541  KIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDV 720
            KIPLPP              RRYAIDASIVRIMKSRKVLG+QQLVMECVEQLGRMFKPD 
Sbjct: 655  KIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDF 714

Query: 721  KAIKKRIEDLITRDYLERDKDNANLFRYLA 810
            KAIKKRIEDLITRDYLERDKDN N FRYLA
Sbjct: 715  KAIKKRIEDLITRDYLERDKDNPNTFRYLA 744


>ref|XP_003546376.1| PREDICTED: cullin-1-like [Glycine max]
          Length = 744

 Score =  373 bits (958), Expect = e-101
 Identities = 197/270 (72%), Positives = 206/270 (76%)
 Frame = +1

Query: 1    NQSNFEEFLGNNPNVNPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKX 180
            NQ++FEE+L NNPN +PGIDLTVTVLTTGFWPSYKSFDLNLPAEMV+CVEVF+EFYQTK 
Sbjct: 490  NQTSFEEYLTNNPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVRCVEVFKEFYQTKT 549

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTTYQASALLLFNSSDR 360
                                                      IVTTYQASALLLFNSSDR
Sbjct: 550  KHRKLTWIYSLGTCNISGKFDPKTVEL---------------IVTTYQASALLLFNSSDR 594

Query: 361  LSYQEIMTQLNLSDDDVVRLLHSLSCAKYKILTKEPNTRTISPNDYFEFNSKFTDKMRRI 540
            LSY EIMTQLNLSDDDV+RLLHSLSCAKYKIL KEPNT+TIS  DYFEFNSKFTDKMRRI
Sbjct: 595  LSYSEIMTQLNLSDDDVIRLLHSLSCAKYKILNKEPNTKTISSTDYFEFNSKFTDKMRRI 654

Query: 541  KIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDV 720
            KIPLPP              RRYAIDASIVRIMKSRKVL YQQLVMECVEQLGRMFKPDV
Sbjct: 655  KIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLSYQQLVMECVEQLGRMFKPDV 714

Query: 721  KAIKKRIEDLITRDYLERDKDNANLFRYLA 810
            KAIKKRIEDLI+RDYLERDKDNANLFRYLA
Sbjct: 715  KAIKKRIEDLISRDYLERDKDNANLFRYLA 744


>ref|XP_002314453.1| predicted protein [Populus trichocarpa] gi|222863493|gb|EEF00624.1|
            predicted protein [Populus trichocarpa]
          Length = 742

 Score =  373 bits (957), Expect = e-101
 Identities = 197/270 (72%), Positives = 205/270 (75%)
 Frame = +1

Query: 1    NQSNFEEFLGNNPNVNPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKX 180
            NQ++FEE+L NNPN NPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQ K 
Sbjct: 488  NQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQIKT 547

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTTYQASALLLFNSSDR 360
                                                      IVTTYQASALLLFNSSDR
Sbjct: 548  KHRKLTWIYSLGTCNLIGKFEPKTMEL---------------IVTTYQASALLLFNSSDR 592

Query: 361  LSYQEIMTQLNLSDDDVVRLLHSLSCAKYKILTKEPNTRTISPNDYFEFNSKFTDKMRRI 540
            LSY EIMTQLNL+DDDVVRLLHSLSCAKYKIL KEPNT+TISP D+FEFNSKFTDKMRRI
Sbjct: 593  LSYSEIMTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRI 652

Query: 541  KIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDV 720
            KIPLPP              RRYAIDASIVRIMKSRKVLG+QQLVMECVEQLGRMFKPD 
Sbjct: 653  KIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDF 712

Query: 721  KAIKKRIEDLITRDYLERDKDNANLFRYLA 810
            KAIKKRIEDLITRDYLERDK+N NLFRYLA
Sbjct: 713  KAIKKRIEDLITRDYLERDKENPNLFRYLA 742


>ref|XP_003550218.1| PREDICTED: cullin-1-like isoform 2 [Glycine max]
          Length = 709

 Score =  372 bits (954), Expect = e-100
 Identities = 194/270 (71%), Positives = 206/270 (76%)
 Frame = +1

Query: 1    NQSNFEEFLGNNPNVNPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKX 180
            NQ++FEE+L NNPN +PGIDLTVTVLTTGFWPSYKSFDLNLPAEM++CVEVF+EFYQTK 
Sbjct: 455  NQTSFEEYLSNNPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMIRCVEVFKEFYQTKT 514

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTTYQASALLLFNSSDR 360
                                                      IVTTYQASALLLFNSSDR
Sbjct: 515  KHRKLTWIYSLGTCNISGKFDPKTVEL---------------IVTTYQASALLLFNSSDR 559

Query: 361  LSYQEIMTQLNLSDDDVVRLLHSLSCAKYKILTKEPNTRTISPNDYFEFNSKFTDKMRRI 540
            LSY EIMTQLNLSDDDV+RLLHSLSCAKYKIL KEPNT+TI   DYFEFNSKFTDKMRRI
Sbjct: 560  LSYSEIMTQLNLSDDDVIRLLHSLSCAKYKILNKEPNTKTILSTDYFEFNSKFTDKMRRI 619

Query: 541  KIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDV 720
            KIPLPP              RRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDV
Sbjct: 620  KIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDV 679

Query: 721  KAIKKRIEDLITRDYLERDKDNANLFRYLA 810
            KAIKKRIEDLI+RDYLERDKDNAN+F+YLA
Sbjct: 680  KAIKKRIEDLISRDYLERDKDNANMFKYLA 709


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