BLASTX nr result

ID: Panax21_contig00003662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003662
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...   574   e-161
ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...   505   e-140
ref|NP_193700.2| Mitochondrial transcription termination factor ...   494   e-137
ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arab...   490   e-136
ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803...   474   e-131

>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score =  574 bits (1479), Expect = e-161
 Identities = 293/428 (68%), Positives = 340/428 (79%), Gaps = 1/428 (0%)
 Frame = -2

Query: 1378 PSEFASFLPRNLIFLGDDHVMLENFHVLCDFGIPRSKIGKLFKEANEIFRYEYGILAMKL 1199
            PSE ++ LPRNL+FL DD VM+EN+HVLCD+GI RS IG+++KE   IFRYE G+L  K+
Sbjct: 129  PSEISALLPRNLMFLSDDCVMIENYHVLCDYGIARSSIGRMYKEVQAIFRYELGLLGSKV 188

Query: 1198 RAYEELGLSKSTVIKLVICCPSLFVGGVNIEFAAVHERLKGLGFGKDWALGYLSDKRTYN 1019
            RAYE LGLS+STVIKLV CCP L VGGVN +F  V +R+KGLGF  DW  GYLS K +YN
Sbjct: 189  RAYEGLGLSRSTVIKLVSCCPWLLVGGVNSQFVMVLKRVKGLGFESDWIGGYLSGKSSYN 248

Query: 1018 WSRMLDTMNFLAEVGYNEMQMGLLFKTNPALLFEVSGKMIYVLICRLLKLGLNMSEVYAL 839
            W RM DT++FL +VGY+E QM  LFKTNP LLFE SGK  YVLI RLLKLG  M  V +L
Sbjct: 249  WKRMHDTIDFLEKVGYSEEQMVSLFKTNPELLFEGSGKKFYVLIGRLLKLGFKMKGVLSL 308

Query: 838  LLQNPQILSAKSAKNLCKAVYFLFGIGMDTKAIAKIVTTQMHSLGSHPLKGPKTVLKSLK 659
             LQNPQILS K  KNL +AV FLF IGM  + I  IV++ +  L S  LKGP+TVL+SLK
Sbjct: 309  FLQNPQILSKKCVKNLWQAVGFLFEIGMKVEDIVSIVSSHVQLLCSCSLKGPRTVLRSLK 368

Query: 658  VDRGTLCKIIEEDPSKLISLASKVN-TSIKQAELQNPSKFLEKTTFLLRLGYTENSEEMT 482
            V R  LC+II+EDPS+L+SLASK    S++    Q+PSK LEKTTFLLRLGY ENS+EM 
Sbjct: 369  VGREGLCQIIKEDPSELLSLASKSKINSMEHVTCQSPSKHLEKTTFLLRLGYVENSDEMF 428

Query: 481  KALKQFRGRGDQLQERFDCLVEAGLDYNVVSSMIKQAPSVLNQSKEVLEKKIDCLRSCLG 302
            KALK FRGRGDQLQERFDCLV+AGLD NVVS+MIKQAPSVLNQ+K V+EKKIDCLR+CLG
Sbjct: 429  KALKLFRGRGDQLQERFDCLVQAGLDCNVVSNMIKQAPSVLNQTKYVIEKKIDCLRNCLG 488

Query: 301  YPPESIAGFPSYLCYDIGRINLRFSMYVWLRQRGAVKSMLSVSTLIASSDARFVKYFVDC 122
            YP +S+  FPSYLCYDI RINLRFSMYVWLR +GA KS LS+ST++A SDARFVKYFVD 
Sbjct: 489  YPLQSVVAFPSYLCYDIERINLRFSMYVWLRDKGAAKSNLSLSTILACSDARFVKYFVDV 548

Query: 121  HPEGPLVW 98
            HPEGP  W
Sbjct: 549  HPEGPAQW 556


>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
            predicted protein [Populus trichocarpa]
          Length = 577

 Score =  505 bits (1300), Expect = e-140
 Identities = 256/428 (59%), Positives = 319/428 (74%), Gaps = 1/428 (0%)
 Frame = -2

Query: 1378 PSEFASFLPRNLIFLGDDHVMLENFHVLCDFGIPRSKIGKLFKEANEIFRYEYGILAMKL 1199
            PSE  S LP +L++LGD+ ++LENFHVLC++GIPRSKIG+++KEA EIF Y YG+L +KL
Sbjct: 141  PSEVPSVLPPHLMYLGDNDMLLENFHVLCNYGIPRSKIGRMYKEAIEIFGYNYGVLKLKL 200

Query: 1198 RAYEELGLSKSTVIKLVICCPSLFVGGVNIEFAAVHERLKGLGFGKDWALGYLSDKRTYN 1019
             AYE LGLSK+TV+KLV CCPSL +GGV+ EF  V  RL   G   D   GYLS K +Y+
Sbjct: 201  LAYENLGLSKTTVVKLVSCCPSLLIGGVDREFVNVLGRLNRAGLKNDLIGGYLSAKESYD 260

Query: 1018 WSRMLDTMNFLAEVGYNEMQMGLLFKTNPALLFEVSGKMIYVLICRLLKLGLNMSEVYAL 839
            W R++DT+ FL +VGY+E Q   L KTNP L+FE SGK +Y+L  RLLKLGL ++E+Y+L
Sbjct: 261  WKRLIDTIYFLDKVGYSEEQFRDLLKTNPVLVFEGSGKKVYLLFGRLLKLGLKVNEIYSL 320

Query: 838  LLQNPQILSAKSAKNLCKAVYFLFGIGMDTKAIAKIVTTQMHSLGSHPLKGPKTVLKSLK 659
              Q PQILSAK AKNL + ++ L GIGM  + IA I++TQM  L S  LKGP T+ +  K
Sbjct: 321  FTQYPQILSAKRAKNLLRGIHILLGIGMGVEDIANIISTQMELLCSAALKGPVTLRRQFK 380

Query: 658  VDRGTLCKIIEEDPSKLISLASKVNT-SIKQAELQNPSKFLEKTTFLLRLGYTENSEEMT 482
              + +LC+I+ E+P +L  L SK    S K    Q P+  LEKT FLLRLGY ENS+EM 
Sbjct: 381  DKKDSLCQILMENPLELFHLDSKSEVESSKMLSSQGPTNKLEKTAFLLRLGYVENSDEMA 440

Query: 481  KALKQFRGRGDQLQERFDCLVEAGLDYNVVSSMIKQAPSVLNQSKEVLEKKIDCLRSCLG 302
            +ALK FRGRGDQLQERFDC V+AGLD NVVSS IKQAP VLNQ+K+V+EKKIDCL + LG
Sbjct: 441  RALKMFRGRGDQLQERFDCPVQAGLDCNVVSSFIKQAPMVLNQTKDVIEKKIDCLTN-LG 499

Query: 301  YPPESIAGFPSYLCYDIGRINLRFSMYVWLRQRGAVKSMLSVSTLIASSDARFVKYFVDC 122
                S+  FPSYLCYD+ RINLRF MY WL+++GA K  LS+ST++A SDARF+KYFVD 
Sbjct: 500  CSVNSLVAFPSYLCYDMERINLRFRMYTWLKEKGAAKPKLSLSTILACSDARFIKYFVDV 559

Query: 121  HPEGPLVW 98
            HPEGP +W
Sbjct: 560  HPEGPAMW 567


>ref|NP_193700.2| Mitochondrial transcription termination factor family protein
            [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1|
            Mitochondrial transcription termination factor family
            protein [Arabidopsis thaliana]
          Length = 575

 Score =  494 bits (1272), Expect = e-137
 Identities = 243/427 (56%), Positives = 312/427 (73%)
 Frame = -2

Query: 1378 PSEFASFLPRNLIFLGDDHVMLENFHVLCDFGIPRSKIGKLFKEANEIFRYEYGILAMKL 1199
            P EF +FLPR L+FL DD +M ENFH LC++GIPR KIG+++KEA EIFRYE G+LAMKL
Sbjct: 141  PYEFETFLPRKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKL 200

Query: 1198 RAYEELGLSKSTVIKLVICCPSLFVGGVNIEFAAVHERLKGLGFGKDWALGYLSDKRTYN 1019
            R YE LGLSK+TVIKLV  CP L VGG++ EF++V ++LKGL  G DW   YLSD++TY+
Sbjct: 201  RGYENLGLSKATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYS 260

Query: 1018 WSRMLDTMNFLAEVGYNEMQMGLLFKTNPALLFEVSGKMIYVLICRLLKLGLNMSEVYAL 839
            W R+L+T+ FL +VG  E ++  L KT PAL+ E SGK  YVL  RL K GL ++E+Y L
Sbjct: 261  WRRILETIEFLDKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEIYRL 320

Query: 838  LLQNPQILSAKSAKNLCKAVYFLFGIGMDTKAIAKIVTTQMHSLGSHPLKGPKTVLKSLK 659
             + NP++LS K  KN+ K + FL  I M+T+ I KI+ + M  +GS  L  P+T   SL 
Sbjct: 321  FIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLN 380

Query: 658  VDRGTLCKIIEEDPSKLISLASKVNTSIKQAELQNPSKFLEKTTFLLRLGYTENSEEMTK 479
            V +  LCKI++++P +L    S       +   ++  K+LEKT FLLRLGY ENS+EM K
Sbjct: 381  VKQDELCKILKKEPLRLFCFVSTTKKRKSKPLSEDSRKYLEKTEFLLRLGYVENSDEMVK 440

Query: 478  ALKQFRGRGDQLQERFDCLVEAGLDYNVVSSMIKQAPSVLNQSKEVLEKKIDCLRSCLGY 299
            ALKQFRGRGDQLQERFDCLV+AGL+YNVV+ +I+ AP +LN SK+V+EKKI  L   LGY
Sbjct: 441  ALKQFRGRGDQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGY 500

Query: 298  PPESIAGFPSYLCYDIGRINLRFSMYVWLRQRGAVKSMLSVSTLIASSDARFVKYFVDCH 119
            P ES+  FP+YLCYD+ RI+ RFSMY+WLR+R A K MLS ST++   DARFVKYFV+ H
Sbjct: 501  PIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVH 560

Query: 118  PEGPLVW 98
            PEGP +W
Sbjct: 561  PEGPAIW 567


>ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp.
            lyrata] gi|297315807|gb|EFH46230.1| hypothetical protein
            ARALYDRAFT_914700 [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  490 bits (1262), Expect = e-136
 Identities = 241/427 (56%), Positives = 312/427 (73%)
 Frame = -2

Query: 1378 PSEFASFLPRNLIFLGDDHVMLENFHVLCDFGIPRSKIGKLFKEANEIFRYEYGILAMKL 1199
            P EF +FLP+ L+FL DD +M ENFH LC++GIPR KIG ++KEA EIFRYE G+LAMKL
Sbjct: 116  PYEFETFLPQKLMFLSDDGIMFENFHALCNYGIPRGKIGHMYKEAREIFRYESGLLAMKL 175

Query: 1198 RAYEELGLSKSTVIKLVICCPSLFVGGVNIEFAAVHERLKGLGFGKDWALGYLSDKRTYN 1019
            R YE LGLSK+TVIKLV  CP L VGG++ EFA+V ++LKGL  G DW   YLSD+RTY+
Sbjct: 176  RDYENLGLSKATVIKLVTSCPLLLVGGIDAEFASVVDKLKGLQVGCDWLGRYLSDRRTYS 235

Query: 1018 WSRMLDTMNFLAEVGYNEMQMGLLFKTNPALLFEVSGKMIYVLICRLLKLGLNMSEVYAL 839
            W R+L+T+ FL +VG  +  +  L KT PAL+ E SGK  YVL  RL K+GL ++E+Y L
Sbjct: 236  WRRILETIEFLDKVGCKDENLSSLLKTYPALVIEGSGKKFYVLFGRLFKVGLQVNEIYRL 295

Query: 838  LLQNPQILSAKSAKNLCKAVYFLFGIGMDTKAIAKIVTTQMHSLGSHPLKGPKTVLKSLK 659
             + NP++LS K  KN+ K + FL  I M+T+ I KI+ + M  +GS  L  P+T   SL 
Sbjct: 296  FIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLN 355

Query: 658  VDRGTLCKIIEEDPSKLISLASKVNTSIKQAELQNPSKFLEKTTFLLRLGYTENSEEMTK 479
            V +  LC++++++P +L S  S       +   ++  K+LEKT FLLRLGY ENS+EM K
Sbjct: 356  VRQDELCQLLKKEPLRLFSFVSTTKKRKSKPLSEDSRKYLEKTAFLLRLGYVENSDEMVK 415

Query: 478  ALKQFRGRGDQLQERFDCLVEAGLDYNVVSSMIKQAPSVLNQSKEVLEKKIDCLRSCLGY 299
            ALKQFRGRGDQLQERFDCLV+AGL++NVV+ +I+ AP +LN SK+V+EKKI  L   LGY
Sbjct: 416  ALKQFRGRGDQLQERFDCLVKAGLNHNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGY 475

Query: 298  PPESIAGFPSYLCYDIGRINLRFSMYVWLRQRGAVKSMLSVSTLIASSDARFVKYFVDCH 119
            P ES+  FP+YLCYD+ RI+ RFSMY+WLR+R A K MLS ST++   DARFVKYFV+ H
Sbjct: 476  PIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVH 535

Query: 118  PEGPLVW 98
            PEGP +W
Sbjct: 536  PEGPAIW 542


>ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803162 [Glycine max]
          Length = 564

 Score =  474 bits (1221), Expect = e-131
 Identities = 236/428 (55%), Positives = 305/428 (71%), Gaps = 1/428 (0%)
 Frame = -2

Query: 1378 PSEFASFLPRNLIFLGDDHVMLENFHVLCDFGIPRSKIGKLFKEANEIFRYEYGILAMKL 1199
            PSE   FLP  + FL DDHV+L+NFH LC++G+PR+++GK FKEA EIF Y  G+L  KL
Sbjct: 125  PSELYLFLPHGMFFLADDHVLLQNFHALCNYGVPRNRMGKFFKEAKEIFGYASGVLLSKL 184

Query: 1198 RAYEELGLSKSTVIKLVICCPSLFVGGVNIEFAAVHERLKGLGFGKDWALGYLSDKRTYN 1019
             AYE LGL KSTV+KLV+CCP L VG VN EF +V + LK +G   DW + YLS  RTY+
Sbjct: 185  EAYENLGLRKSTVVKLVVCCPLLLVGDVNFEFVSVLDWLKRIGIESDWMVNYLSCSRTYS 244

Query: 1018 WSRMLDTMNFLAEVGYNEMQMGLLFKTNPALLFEVSGKMIYVLICRLLKLGLNMSEVYAL 839
            W RMLD M FL +VGY+E QM  LF+ NP LL E  G+ +Y++  RLLK+G+ M+ VY+ 
Sbjct: 245  WKRMLDAMLFLHKVGYSEEQMHNLFRENPKLLLEGFGRKVYLVFGRLLKVGVEMNVVYSY 304

Query: 838  LLQNPQILSAKSAKNLCKAVYFLFGIGMDTKAIAKIVTTQMHSLGSHPLKGPKTVLKSLK 659
             ++ P IL  K A ++ + + FL  IGM    I  I++  MH L +  LKG KTV + LK
Sbjct: 305  FVEYPNILLNKCANDMLRVIDFLGAIGMGKDDITHILSKYMHLLITRSLKGHKTVCQELK 364

Query: 658  VDRGTLCKIIEEDPSKLISLASKVNTSIK-QAELQNPSKFLEKTTFLLRLGYTENSEEMT 482
            V +  L +II++DP KLISLASK       + +  +P  +LEKTTFLL+LGY ENSEEM 
Sbjct: 365  VGKADLYQIIKDDPLKLISLASKQEQKGNGKVDSHDPRNYLEKTTFLLKLGYIENSEEMA 424

Query: 481  KALKQFRGRGDQLQERFDCLVEAGLDYNVVSSMIKQAPSVLNQSKEVLEKKIDCLRSCLG 302
            KALK FRGRGDQLQERFDCLVEAGLDYN V  MIK+AP +L+Q+K V++KKID L++ L 
Sbjct: 425  KALKMFRGRGDQLQERFDCLVEAGLDYNSVIEMIKRAPMILSQNKAVIQKKIDFLKNVLD 484

Query: 301  YPPESIAGFPSYLCYDIGRINLRFSMYVWLRQRGAVKSMLSVSTLIASSDARFVKYFVDC 122
            YP E + GFP+Y C+D+ +I  R SMY WL++R AV   L++ST+IAS+D RFVKYFV+ 
Sbjct: 485  YPLEGLVGFPTYFCHDLDKIVERLSMYAWLKERNAVNPTLTLSTIIASNDKRFVKYFVNV 544

Query: 121  HPEGPLVW 98
            HP+G  +W
Sbjct: 545  HPQGSAIW 552


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