BLASTX nr result
ID: Panax21_contig00003655
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00003655 (492 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259... 115 5e-24 emb|CBI16673.3| unnamed protein product [Vitis vinifera] 115 5e-24 ref|XP_002511578.1| RNA binding protein, putative [Ricinus commu... 112 4e-23 ref|XP_002327032.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 gb|ABK94354.1| unknown [Populus trichocarpa] 107 1e-21 >ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259885 [Vitis vinifera] Length = 370 Score = 115 bits (287), Expect = 5e-24 Identities = 70/161 (43%), Positives = 78/161 (48%) Frame = +3 Query: 9 AKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXXNRXXXXXXXXXXXXXXXXX 188 AKLPSKP PPAQAVRE K E R NR Sbjct: 48 AKLPSKPVPPAQAVREGKNESGRGGGRGGRGYGRGRGGGGFNRDYANNENSFSNMGVAGG 107 Query: 189 KGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGRGNE 368 +G E+ + G+ S D RR FER SGTGRGNE Sbjct: 108 QGAPEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGDG--DRPRRAFERRSGTGRGNE 165 Query: 369 YKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491 KREG+GRGNWGT+TDE+S VTEEV NE EK LGAEKP+GE Sbjct: 166 LKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGE 206 >emb|CBI16673.3| unnamed protein product [Vitis vinifera] Length = 361 Score = 115 bits (287), Expect = 5e-24 Identities = 70/161 (43%), Positives = 78/161 (48%) Frame = +3 Query: 9 AKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXXNRXXXXXXXXXXXXXXXXX 188 AKLPSKP PPAQAVRE K E R NR Sbjct: 48 AKLPSKPVPPAQAVREGKNESGRGGGRGGRGYGRGRGGGGFNRDYANNENSFSNMGVAGG 107 Query: 189 KGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGRGNE 368 +G E+ + G+ S D RR FER SGTGRGNE Sbjct: 108 QGAPEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGDG--DRPRRAFERRSGTGRGNE 165 Query: 369 YKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491 KREG+GRGNWGT+TDE+S VTEEV NE EK LGAEKP+GE Sbjct: 166 LKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGE 206 >ref|XP_002511578.1| RNA binding protein, putative [Ricinus communis] gi|223548758|gb|EEF50247.1| RNA binding protein, putative [Ricinus communis] Length = 295 Score = 112 bits (279), Expect = 4e-23 Identities = 66/161 (40%), Positives = 78/161 (48%) Frame = +3 Query: 9 AKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXXNRXXXXXXXXXXXXXXXXX 188 AKLPSKP PP+QAVRE++ EG +R Sbjct: 54 AKLPSKPLPPSQAVREARNEGGHGGGRGAGGRGYGRGRGAYSRESSNNENSFSNTGAPAG 113 Query: 189 KGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGRGNE 368 +G E+ D G+TS + RR FER SGTG GNE Sbjct: 114 QGAPEDGDAGKTSERRSYGGARGGYRGGRRGGFANGEVGDG-ERPRRAFERRSGTGHGNE 172 Query: 369 YKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491 +KREGAGRGNWGT TDEI+QVTEE NE EK +G EKP+GE Sbjct: 173 FKREGAGRGNWGTNTDEIAQVTEEAVNEGEKNMGDEKPVGE 213 >ref|XP_002327032.1| predicted protein [Populus trichocarpa] gi|222835347|gb|EEE73782.1| predicted protein [Populus trichocarpa] Length = 373 Score = 107 bits (267), Expect = 1e-21 Identities = 66/164 (40%), Positives = 77/164 (46%), Gaps = 1/164 (0%) Frame = +3 Query: 3 PVAKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXX-NRXXXXXXXXXXXXXX 179 P AKLPSKP PP+QAVRE+K EG R NR Sbjct: 48 PAAKLPSKPLPPSQAVREAKTEGGRGGGRGGGGGRGYGRGRGGYNRDFNNNESSFGNSGA 107 Query: 180 XXXKGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGR 359 +G E+ DT +T + RR ER SGTGR Sbjct: 108 PTVQGAAEDGDTAKTFESRGYGGPRGGGFRGGRRGGFGNEEVGEGERPRRTNERWSGTGR 167 Query: 360 GNEYKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491 GNE KREG+GRGNWGT TDE++ VTEE ANE EK LG +KP+ E Sbjct: 168 GNEMKREGSGRGNWGTPTDELALVTEEAANEGEKNLGDDKPVEE 211 >gb|ABK94354.1| unknown [Populus trichocarpa] Length = 373 Score = 107 bits (267), Expect = 1e-21 Identities = 66/164 (40%), Positives = 77/164 (46%), Gaps = 1/164 (0%) Frame = +3 Query: 3 PVAKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXX-NRXXXXXXXXXXXXXX 179 P AKLPSKP PP+QAVRE+K EG R NR Sbjct: 48 PAAKLPSKPLPPSQAVREAKTEGGRGGGRGGGGGRGYGRGRGGYNRDFNNNESSFGNSGA 107 Query: 180 XXXKGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGR 359 +G E+ DT +T + RR ER SGTGR Sbjct: 108 PTVQGAAEDGDTAKTFESRGYGGPRGGGFRGGRRGGFGNEEVGEGERPRRTNERWSGTGR 167 Query: 360 GNEYKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491 GNE KREG+GRGNWGT TDE++ VTEE ANE EK LG +KP+ E Sbjct: 168 GNEMKREGSGRGNWGTPTDELALVTEEAANEGEKNLGDDKPVEE 211