BLASTX nr result

ID: Panax21_contig00003655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003655
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259...   115   5e-24
emb|CBI16673.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002511578.1| RNA binding protein, putative [Ricinus commu...   112   4e-23
ref|XP_002327032.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
gb|ABK94354.1| unknown [Populus trichocarpa]                          107   1e-21

>ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259885 [Vitis vinifera]
          Length = 370

 Score =  115 bits (287), Expect = 5e-24
 Identities = 70/161 (43%), Positives = 78/161 (48%)
 Frame = +3

Query: 9   AKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXXNRXXXXXXXXXXXXXXXXX 188
           AKLPSKP PPAQAVRE K E  R                  NR                 
Sbjct: 48  AKLPSKPVPPAQAVREGKNESGRGGGRGGRGYGRGRGGGGFNRDYANNENSFSNMGVAGG 107

Query: 189 KGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGRGNE 368
           +G  E+ + G+ S                             D  RR FER SGTGRGNE
Sbjct: 108 QGAPEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGDG--DRPRRAFERRSGTGRGNE 165

Query: 369 YKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491
            KREG+GRGNWGT+TDE+S VTEEV NE EK LGAEKP+GE
Sbjct: 166 LKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGE 206


>emb|CBI16673.3| unnamed protein product [Vitis vinifera]
          Length = 361

 Score =  115 bits (287), Expect = 5e-24
 Identities = 70/161 (43%), Positives = 78/161 (48%)
 Frame = +3

Query: 9   AKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXXNRXXXXXXXXXXXXXXXXX 188
           AKLPSKP PPAQAVRE K E  R                  NR                 
Sbjct: 48  AKLPSKPVPPAQAVREGKNESGRGGGRGGRGYGRGRGGGGFNRDYANNENSFSNMGVAGG 107

Query: 189 KGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGRGNE 368
           +G  E+ + G+ S                             D  RR FER SGTGRGNE
Sbjct: 108 QGAPEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGDG--DRPRRAFERRSGTGRGNE 165

Query: 369 YKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491
            KREG+GRGNWGT+TDE+S VTEEV NE EK LGAEKP+GE
Sbjct: 166 LKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGE 206


>ref|XP_002511578.1| RNA binding protein, putative [Ricinus communis]
           gi|223548758|gb|EEF50247.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 295

 Score =  112 bits (279), Expect = 4e-23
 Identities = 66/161 (40%), Positives = 78/161 (48%)
 Frame = +3

Query: 9   AKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXXNRXXXXXXXXXXXXXXXXX 188
           AKLPSKP PP+QAVRE++ EG                    +R                 
Sbjct: 54  AKLPSKPLPPSQAVREARNEGGHGGGRGAGGRGYGRGRGAYSRESSNNENSFSNTGAPAG 113

Query: 189 KGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGRGNE 368
           +G  E+ D G+TS                             +  RR FER SGTG GNE
Sbjct: 114 QGAPEDGDAGKTSERRSYGGARGGYRGGRRGGFANGEVGDG-ERPRRAFERRSGTGHGNE 172

Query: 369 YKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491
           +KREGAGRGNWGT TDEI+QVTEE  NE EK +G EKP+GE
Sbjct: 173 FKREGAGRGNWGTNTDEIAQVTEEAVNEGEKNMGDEKPVGE 213


>ref|XP_002327032.1| predicted protein [Populus trichocarpa] gi|222835347|gb|EEE73782.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score =  107 bits (267), Expect = 1e-21
 Identities = 66/164 (40%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   PVAKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXX-NRXXXXXXXXXXXXXX 179
           P AKLPSKP PP+QAVRE+K EG R                   NR              
Sbjct: 48  PAAKLPSKPLPPSQAVREAKTEGGRGGGRGGGGGRGYGRGRGGYNRDFNNNESSFGNSGA 107

Query: 180 XXXKGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGR 359
              +G  E+ DT +T                              +  RR  ER SGTGR
Sbjct: 108 PTVQGAAEDGDTAKTFESRGYGGPRGGGFRGGRRGGFGNEEVGEGERPRRTNERWSGTGR 167

Query: 360 GNEYKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491
           GNE KREG+GRGNWGT TDE++ VTEE ANE EK LG +KP+ E
Sbjct: 168 GNEMKREGSGRGNWGTPTDELALVTEEAANEGEKNLGDDKPVEE 211


>gb|ABK94354.1| unknown [Populus trichocarpa]
          Length = 373

 Score =  107 bits (267), Expect = 1e-21
 Identities = 66/164 (40%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   PVAKLPSKPAPPAQAVRESKIEGAREXXXXXXXXXXXXXXXXX-NRXXXXXXXXXXXXXX 179
           P AKLPSKP PP+QAVRE+K EG R                   NR              
Sbjct: 48  PAAKLPSKPLPPSQAVREAKTEGGRGGGRGGGGGRGYGRGRGGYNRDFNNNESSFGNSGA 107

Query: 180 XXXKGVIEETDTGRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHTRRVFERHSGTGR 359
              +G  E+ DT +T                              +  RR  ER SGTGR
Sbjct: 108 PTVQGAAEDGDTAKTFESRGYGGPRGGGFRGGRRGGFGNEEVGEGERPRRTNERWSGTGR 167

Query: 360 GNEYKREGAGRGNWGTQTDEISQVTEEVANEYEKILGAEKPLGE 491
           GNE KREG+GRGNWGT TDE++ VTEE ANE EK LG +KP+ E
Sbjct: 168 GNEMKREGSGRGNWGTPTDELALVTEEAANEGEKNLGDDKPVEE 211


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