BLASTX nr result

ID: Panax21_contig00003647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003647
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302798.1| predicted protein [Populus trichocarpa] gi|2...   308   3e-82
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   308   3e-82
emb|CAA48410.1| light harvesting chlorophyll a /b binding protei...   307   7e-82
gb|AEV59645.1| chloroplast photosystem II light harvesting compl...   306   9e-82
gb|AEV59643.1| chloroplast photosystem II light harvesting compl...   306   9e-82

>ref|XP_002302798.1| predicted protein [Populus trichocarpa] gi|222844524|gb|EEE82071.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  308 bits (789), Expect = 3e-82
 Identities = 149/152 (98%), Positives = 151/152 (99%)
 Frame = +3

Query: 3   HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 182
           HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAI
Sbjct: 102 HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI 161

Query: 183 WATQVVLMGAVEGYRIAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA 362
           WATQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLA
Sbjct: 162 WATQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLA 221

Query: 363 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 458
           MFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 222 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 253


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  308 bits (789), Expect = 3e-82
 Identities = 149/152 (98%), Positives = 151/152 (99%)
 Frame = +3

Query: 3   HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 182
           HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI
Sbjct: 103 HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 162

Query: 183 WATQVVLMGAVEGYRIAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA 362
           WATQV+LMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLA
Sbjct: 163 WATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLA 222

Query: 363 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 458
           MFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 223 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254


>emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix]
          Length = 193

 Score =  307 bits (786), Expect = 7e-82
 Identities = 149/152 (98%), Positives = 151/152 (99%)
 Frame = +3

Query: 3   HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 182
           HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI
Sbjct: 29  HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 88

Query: 183 WATQVVLMGAVEGYRIAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA 362
           WATQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKELKNGRLA
Sbjct: 89  WATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLA 148

Query: 363 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 458
           MFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 149 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 180


>gb|AEV59645.1| chloroplast photosystem II light harvesting complex protein type I,
           partial [Oxytropis lambertii]
          Length = 237

 Score =  306 bits (785), Expect = 9e-82
 Identities = 149/152 (98%), Positives = 150/152 (98%)
 Frame = +3

Query: 3   HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 182
           HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI
Sbjct: 73  HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 132

Query: 183 WATQVVLMGAVEGYRIAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA 362
           WA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA
Sbjct: 133 WAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA 192

Query: 363 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 458
           MFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 193 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 224


>gb|AEV59643.1| chloroplast photosystem II light harvesting complex protein type I,
           partial [Oxytropis splendens]
          Length = 236

 Score =  306 bits (785), Expect = 9e-82
 Identities = 149/152 (98%), Positives = 150/152 (98%)
 Frame = +3

Query: 3   HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 182
           HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI
Sbjct: 73  HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAI 132

Query: 183 WATQVVLMGAVEGYRIAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA 362
           WA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA
Sbjct: 133 WAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA 192

Query: 363 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 458
           MFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 193 MFSMFGFFVQAIVTGKGPLENLADHLADPVNN 224


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