BLASTX nr result

ID: Panax21_contig00003638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003638
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v...    91   5e-16
emb|CBI15756.3| unnamed protein product [Vitis vinifera]               91   5e-16
ref|XP_003532387.1| PREDICTED: protein MEI2-like 1-like [Glycine...    83   1e-13
ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu...    83   1e-13
gb|AFO38380.1| putative Mei2 protein, partial [Glycine max]            80   5e-13

>ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 991

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
 Frame = -1

Query: 481 MDQRDASMPSGLFKEIHFLSEEKTSFWKQKSIRGQHEDAQPHQYADTASSNKMEEPLVVT 302
           ++ +  S+   L++   F S     F   + +R    D   HQ A T + +  EE L  +
Sbjct: 122 VEVKKTSINGALYESSLFSSSLSEIF--NRKLRVSTSDVLSHQSAGTVAPHSEEEKLFKS 179

Query: 301 -KEIEVQGIRNLLPDEDDLFSGIIDKLRLSTHSDGSDGAEDFDLFRSGGGMELELDNCLN 125
            +EIEVQ + NLLPDED+LFSG++D +  + H++  D  EDFDLF SGGGMELE D+ L 
Sbjct: 180 LEEIEVQTLGNLLPDEDELFSGVVDDMGYNAHANNGDDFEDFDLFSSGGGMELEGDDHLC 239

Query: 124 SCQEXXXXXXXXXXXXXXXXXXXXSKHQNPSGVRPCRTLFV 2
             Q                     S+H  P G  P RTLFV
Sbjct: 240 ISQRHSDFNGGIPNSQGGSNGSLASEH--PYGEHPSRTLFV 278


>emb|CBI15756.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
 Frame = -1

Query: 481 MDQRDASMPSGLFKEIHFLSEEKTSFWKQKSIRGQHEDAQPHQYADTASSNKMEEPLVVT 302
           ++ +  S+   L++   F S     F   + +R    D   HQ A T + +  EE L  +
Sbjct: 128 VEVKKTSINGALYESSLFSSSLSEIF--NRKLRVSTSDVLSHQSAGTVAPHSEEEKLFKS 185

Query: 301 -KEIEVQGIRNLLPDEDDLFSGIIDKLRLSTHSDGSDGAEDFDLFRSGGGMELELDNCLN 125
            +EIEVQ + NLLPDED+LFSG++D +  + H++  D  EDFDLF SGGGMELE D+ L 
Sbjct: 186 LEEIEVQTLGNLLPDEDELFSGVVDDMGYNAHANNGDDFEDFDLFSSGGGMELEGDDHLC 245

Query: 124 SCQEXXXXXXXXXXXXXXXXXXXXSKHQNPSGVRPCRTLFV 2
             Q                     S+H  P G  P RTLFV
Sbjct: 246 ISQRHSDFNGGIPNSQGGSNGSLASEH--PYGEHPSRTLFV 284


>ref|XP_003532387.1| PREDICTED: protein MEI2-like 1-like [Glycine max]
          Length = 955

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 42/74 (56%), Positives = 52/74 (70%)
 Frame = -1

Query: 343 TASSNKMEEPLVVTKEIEVQGIRNLLPDEDDLFSGIIDKLRLSTHSDGSDGAEDFDLFRS 164
           TA S   EEP    +E+E   I NLLPDEDDLFSG++D+L  S+H+  +D  EDFDLF S
Sbjct: 152 TAGSPPKEEPYKSLEEMEADTIGNLLPDEDDLFSGVVDELGCSSHARTNDDFEDFDLFSS 211

Query: 163 GGGMELELDNCLNS 122
           GGGME+E D  L+S
Sbjct: 212 GGGMEMEGDEHLSS 225


>ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
           gi|223550206|gb|EEF51693.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 972

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 54/130 (41%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
 Frame = -1

Query: 388 IRGQHEDAQPHQYADT-ASSNKMEEPLVVTKEIEVQGIRNLLPDEDDLFSGIIDKLRLST 212
           +R    D Q  Q A   A  N+ +EP    +E+E Q I NLLP EDDLFSG+ D+L  + 
Sbjct: 150 LRLLENDIQSRQPAKPIALPNEEDEPFESLEELEAQTIGNLLPAEDDLFSGVTDELGHNA 209

Query: 211 HSDGSDGAEDFDLFRSGGGMELELDNCLNSCQEXXXXXXXXXXXXXXXXXXXXSKHQNPS 32
           H++G D  EDFDLF +GGGMELE D+ L   Q                      +H  P 
Sbjct: 210 HTNGGDDLEDFDLFITGGGMELEGDDRLCVGQRNSDFVGALSNLQGGSNGSVVGEH--PY 267

Query: 31  GVRPCRTLFV 2
           G  P RTLFV
Sbjct: 268 GEHPSRTLFV 277


>gb|AFO38380.1| putative Mei2 protein, partial [Glycine max]
          Length = 860

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 41/73 (56%), Positives = 51/73 (69%)
 Frame = -1

Query: 340 ASSNKMEEPLVVTKEIEVQGIRNLLPDEDDLFSGIIDKLRLSTHSDGSDGAEDFDLFRSG 161
           A S   EEP    +E+E   I NLLPDEDDLFSG++D+L  S+H+  +D  EDFDLF SG
Sbjct: 128 ADSPPEEEPYKSLEEMEADTIGNLLPDEDDLFSGVVDELGCSSHARTNDDFEDFDLFSSG 187

Query: 160 GGMELELDNCLNS 122
           GGME+E D  L+S
Sbjct: 188 GGMEMEGDEHLSS 200


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