BLASTX nr result

ID: Panax21_contig00003635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003635
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594309.1| ADP-ribosylation factor GTPase-activating pr...    82   4e-14
gb|ABD28590.2| C2 [Medicago truncatula]                                82   4e-14
gb|AFK40542.1| unknown [Lotus japonicus]                               80   1e-13
ref|XP_002275013.1| PREDICTED: ADP-ribosylation factor GTPase-ac...    78   8e-13
emb|CAN75734.1| hypothetical protein VITISV_030148 [Vitis vinifera]    78   8e-13

>ref|XP_003594309.1| ADP-ribosylation factor GTPase-activating protein AGD12 [Medicago
           truncatula] gi|217073670|gb|ACJ85195.1| unknown
           [Medicago truncatula] gi|355483357|gb|AES64560.1|
           ADP-ribosylation factor GTPase-activating protein AGD12
           [Medicago truncatula]
          Length = 166

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = -1

Query: 433 ILGVATEGETLRKVIPDSENCLAADSSIKLNNGEVVQDVWLRLRDVESGEIELKIKFT 260
           IL V++  +TLRKVIPDSENCL  +SSI   NGEVVQ+VWLRLR+VESGEIEL +K T
Sbjct: 102 ILRVSSGEQTLRKVIPDSENCLVRESSINCVNGEVVQNVWLRLREVESGEIELTLKLT 159


>gb|ABD28590.2| C2 [Medicago truncatula]
          Length = 173

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = -1

Query: 433 ILGVATEGETLRKVIPDSENCLAADSSIKLNNGEVVQDVWLRLRDVESGEIELKIKFT 260
           IL V++  +TLRKVIPDSENCL  +SSI   NGEVVQ+VWLRLR+VESGEIEL +K T
Sbjct: 109 ILRVSSGEQTLRKVIPDSENCLVRESSINCVNGEVVQNVWLRLREVESGEIELTLKLT 166


>gb|AFK40542.1| unknown [Lotus japonicus]
          Length = 166

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/56 (71%), Positives = 46/56 (82%)
 Frame = -1

Query: 433 ILGVATEGETLRKVIPDSENCLAADSSIKLNNGEVVQDVWLRLRDVESGEIELKIK 266
           IL V++   TLRKV+PDSENCL  +SSI   NGEVVQ+VWLRLRDVESGE+EL IK
Sbjct: 102 ILRVSSGETTLRKVVPDSENCLVRESSINCVNGEVVQNVWLRLRDVESGEVELTIK 157


>ref|XP_002275013.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12
           [Vitis vinifera] gi|297741867|emb|CBI33247.3| unnamed
           protein product [Vitis vinifera]
          Length = 165

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/65 (60%), Positives = 48/65 (73%)
 Frame = -1

Query: 436 QILGVATEGETLRKVIPDSENCLAADSSIKLNNGEVVQDVWLRLRDVESGEIELKIKFTN 257
           QILGV++   TLRKVIPD +NCL  +S +   NGEVVQDVWLRL  VESGEI+L+IK  +
Sbjct: 101 QILGVSSGETTLRKVIPDPDNCLVRESCVSCINGEVVQDVWLRLCGVESGEIQLQIKLMD 160

Query: 256 LHVSP 242
              +P
Sbjct: 161 PPAAP 165


>emb|CAN75734.1| hypothetical protein VITISV_030148 [Vitis vinifera]
          Length = 1922

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/65 (60%), Positives = 48/65 (73%)
 Frame = -1

Query: 436  QILGVATEGETLRKVIPDSENCLAADSSIKLNNGEVVQDVWLRLRDVESGEIELKIKFTN 257
            QILGV++   TLRKVIPD +NCL  +S +   NGEVVQDVWLRL  VESGEI+L+IK  +
Sbjct: 1858 QILGVSSGETTLRKVIPDPDNCLVRESCVSCINGEVVQDVWLRLCGVESGEIQLQIKLMD 1917

Query: 256  LHVSP 242
               +P
Sbjct: 1918 PPAAP 1922


Top