BLASTX nr result

ID: Panax21_contig00003624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003624
         (1222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511544.1| abc transporter, putative [Ricinus communis]...    67   9e-09
ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7...    66   2e-08
ref|XP_002330092.1| ABC transporter family, cholesterol/phosphol...    66   2e-08
ref|XP_002318606.1| ABC transporter family, cholesterol/phosphol...    65   3e-08
ref|NP_190358.3| ABC transporter A family member 3 [Arabidopsis ...    65   3e-08

>ref|XP_002511544.1| abc transporter, putative [Ricinus communis]
           gi|223550659|gb|EEF52146.1| abc transporter, putative
           [Ricinus communis]
          Length = 984

 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 33/35 (94%), Positives = 33/35 (94%)
 Frame = -3

Query: 107 QAVEESLRSVNLFNGGVADKQAGKYSGGMKRRFSV 3
           QAVEESLRSVNLFN GVADKQAGKYSGGMKRR SV
Sbjct: 777 QAVEESLRSVNLFNSGVADKQAGKYSGGMKRRLSV 811


>ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7-like [Glycine max]
          Length = 949

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 32/35 (91%), Positives = 34/35 (97%)
 Frame = -3

Query: 107 QAVEESLRSVNLFNGGVADKQAGKYSGGMKRRFSV 3
           QAVEESL+SVNLF+GGVADKQAGKYSGGMKRR SV
Sbjct: 742 QAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSV 776


>ref|XP_002330092.1| ABC transporter family, cholesterol/phospholipid flippase [Populus
           trichocarpa] gi|222871226|gb|EEF08357.1| ABC transporter
           family, cholesterol/phospholipid flippase [Populus
           trichocarpa]
          Length = 911

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 32/35 (91%), Positives = 34/35 (97%)
 Frame = -3

Query: 107 QAVEESLRSVNLFNGGVADKQAGKYSGGMKRRFSV 3
           +AVEESLRSVNLFNGGVADK+AGKYSGGMKRR SV
Sbjct: 704 RAVEESLRSVNLFNGGVADKKAGKYSGGMKRRLSV 738


>ref|XP_002318606.1| ABC transporter family, cholesterol/phospholipid flippase [Populus
           trichocarpa] gi|222859279|gb|EEE96826.1| ABC transporter
           family, cholesterol/phospholipid flippase [Populus
           trichocarpa]
          Length = 939

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = -3

Query: 107 QAVEESLRSVNLFNGGVADKQAGKYSGGMKRRFSV 3
           +AVE+SL+SVNLFNGGVADKQAGKYSGGMKRR SV
Sbjct: 732 KAVEDSLKSVNLFNGGVADKQAGKYSGGMKRRLSV 766


>ref|NP_190358.3| ABC transporter A family member 3 [Arabidopsis thaliana]
           gi|374095510|sp|Q1PEH6.3|AB3A_ARATH RecName: Full=ABC
           transporter A family member 3; Short=ABC transporter
           ABCA.3; Short=AtABCA3; AltName: Full=ABC2 homolog 2
           gi|332644803|gb|AEE78324.1| ABC transporter A family
           member 3 [Arabidopsis thaliana]
          Length = 932

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = -3

Query: 107 QAVEESLRSVNLFNGGVADKQAGKYSGGMKRRFSV 3
           QAVEESLRSVNLF+GGVADK AGKYSGGMKRR SV
Sbjct: 725 QAVEESLRSVNLFHGGVADKPAGKYSGGMKRRLSV 759


Top