BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003621
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus...   158   7e-37
ref|XP_003601110.1| 30S ribosomal protein S13 [Medicago truncatu...   155   6e-36
ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|2...   155   6e-36
ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|1...   154   1e-35
gb|AFK44070.1| unknown [Lotus japonicus]                              154   1e-35

>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
           gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 290

 Score =  158 bits (399), Expect = 7e-37
 Identities = 79/112 (70%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
 Frame = -1

Query: 386 LSKRSLRIGA-EIPNDKKIEYSLQYIHGIGRSRARQILSNLNIVNKITKDLCNEEIIALR 210
           LS R  R+G  EIPN+K+IEYSLQYIHG+GRSRARQILS+L++ NKITK+L  EE+I LR
Sbjct: 164 LSIRCARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSMENKITKELSEEELITLR 223

Query: 209 DEVNKYMIEGDLRRLVVHDIERLKAIQCYRGARHTDGLSCRGQRTKTNCWTM 54
           DEV+KYMIEGDLRR    +I RLK IQCYRG RH  GL CRGQRTK NC T+
Sbjct: 224 DEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTL 275



 Score =  112 bits (279), Expect = 6e-23
 Identities = 60/112 (53%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = -1

Query: 389 YLSKRSLRIG-AEIPNDKKIEYSLQYIHGIGRSRARQILSNLNIVNKITKDLCNEEIIAL 213
           Y   + LR+G AEIP+DK++ ++LQ+I GIGR RA QIL +L++ NK TKDL   E+  L
Sbjct: 30  YQRVQCLRVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSLENKRTKDLTGLELHTL 89

Query: 212 RDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGARHTDGLSCRGQRTKTNCWT 57
           R+EV+KY+I  +L R V  DI+RL  IQCYRG  H   L CRGQ T+TN  T
Sbjct: 90  RNEVSKYLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNART 141


>ref|XP_003601110.1| 30S ribosomal protein S13 [Medicago truncatula]
           gi|355490158|gb|AES71361.1| 30S ribosomal protein S13
           [Medicago truncatula] gi|388516343|gb|AFK46233.1|
           unknown [Medicago truncatula]
          Length = 166

 Score =  155 bits (391), Expect = 6e-36
 Identities = 77/125 (61%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = -1

Query: 425 PNSKLIKLDTVVYLSKRSLRIGA-EIPNDKKIEYSLQYIHGIGRSRARQILSNLNIVNKI 249
           P SK+ +L+ V       +R+G  EIPN+K+IE+SLQYIHG+GR+RARQIL+++++ NK+
Sbjct: 35  PKSKVQRLNIVC------VRVGGVEIPNNKRIEFSLQYIHGVGRNRARQILTDISMENKV 88

Query: 248 TKDLCNEEIIALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGARHTDGLSCRGQRTKT 69
           TK+L  EE+I+LRDEVNKYMIEGDLRR    +I+RLK IQCYRG RH  GL CRGQRTK 
Sbjct: 89  TKELSEEELISLRDEVNKYMIEGDLRRFNALNIKRLKEIQCYRGIRHIQGLPCRGQRTKN 148

Query: 68  NCWTM 54
           NC T+
Sbjct: 149 NCRTL 153


>ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|222856058|gb|EEE93605.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  155 bits (391), Expect = 6e-36
 Identities = 79/115 (68%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
 Frame = -1

Query: 395 VVYLSKRSLRIGA-EIPNDKKIEYSLQYIHGIGRSRARQILSNLNIVNKITKDLCNEEII 219
           V  LS R  R+G  EIPN K++EYSLQYIHGIGRS ARQILS+L + NKITKDL  +E+I
Sbjct: 39  VCSLSIRCARVGGVEIPNSKRVEYSLQYIHGIGRSIARQILSDLTMENKITKDLSEDELI 98

Query: 218 ALRDEVNKYMIEGDLRRLVVHDIERLKAIQCYRGARHTDGLSCRGQRTKTNCWTM 54
            LRDEV+KYMIEGDLRR    +I RLK IQCYRG RH  GL CRGQRTK NC T+
Sbjct: 99  TLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTL 153


>ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|118488232|gb|ABK95935.1|
           unknown [Populus trichocarpa]
           gi|222843982|gb|EEE81529.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  154 bits (389), Expect = 1e-35
 Identities = 78/112 (69%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
 Frame = -1

Query: 386 LSKRSLRIGA-EIPNDKKIEYSLQYIHGIGRSRARQILSNLNIVNKITKDLCNEEIIALR 210
           LS R  R+G  EIPN K++EYSLQYIHGIGRS ARQILS+L++ NKITKDL  EE+I LR
Sbjct: 42  LSIRCARVGGVEIPNSKRVEYSLQYIHGIGRSNARQILSDLSMENKITKDLSEEELIILR 101

Query: 209 DEVNKYMIEGDLRRLVVHDIERLKAIQCYRGARHTDGLSCRGQRTKTNCWTM 54
           DEV+KY IEGDLRR    +I RLK IQCYRG RH  GL CRGQRTK NC T+
Sbjct: 102 DEVSKYTIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 153


>gb|AFK44070.1| unknown [Lotus japonicus]
          Length = 164

 Score =  154 bits (388), Expect = 1e-35
 Identities = 76/112 (67%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
 Frame = -1

Query: 386 LSKRSLRIGA-EIPNDKKIEYSLQYIHGIGRSRARQILSNLNIVNKITKDLCNEEIIALR 210
           LS +S+R+G  EIPN+K+IE+SLQYIHG+GR RAR+IL +LN+ NKITK+L  EE+I LR
Sbjct: 40  LSIKSVRVGGVEIPNNKRIEFSLQYIHGVGRVRARKILCDLNMDNKITKELSEEELITLR 99

Query: 209 DEVNKYMIEGDLRRLVVHDIERLKAIQCYRGARHTDGLSCRGQRTKTNCWTM 54
           DEV+KYMIEGDLRR    +I+RLK IQCYRG RH  GL CRGQRTK NC T+
Sbjct: 100 DEVSKYMIEGDLRRFNATNIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTL 151