BLASTX nr result

ID: Panax21_contig00003610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003610
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142291.1| PREDICTED: uncharacterized protein LOC101210...    92   4e-17
ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252...    89   3e-16
emb|CBI26785.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002527549.1| conserved hypothetical protein [Ricinus comm...    87   1e-15
gb|ABK95394.1| unknown [Populus trichocarpa]                           87   1e-15

>ref|XP_004142291.1| PREDICTED: uncharacterized protein LOC101210274 [Cucumis sativus]
           gi|449481289|ref|XP_004156139.1| PREDICTED:
           uncharacterized LOC101210274 [Cucumis sativus]
          Length = 684

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/59 (72%), Positives = 50/59 (84%)
 Frame = +3

Query: 225 GQTFVISKRPMRGHGREMIQLAFPVADAPPEDETIAGSSKDRRIEPIPGLLQYGIERLI 401
           GQT+V+SKRPM+GHGREMIQL FP+ADAP ED+   G SKDRRIEPIP LLQ  I+RL+
Sbjct: 321 GQTYVVSKRPMKGHGREMIQLGFPIADAPHEDDNSLGLSKDRRIEPIPSLLQDLIDRLV 379


>ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252594 [Vitis vinifera]
          Length = 698

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/63 (66%), Positives = 50/63 (79%)
 Frame = +3

Query: 219 IMGQTFVISKRPMRGHGREMIQLAFPVADAPPEDETIAGSSKDRRIEPIPGLLQYGIERL 398
           + GQTFV+SKRPM+GHGREMIQL  P+ADAP EDE++ G+SKDRR E IP LLQ  I  L
Sbjct: 322 LQGQTFVVSKRPMKGHGREMIQLGVPIADAPLEDESVVGTSKDRRTESIPSLLQDVIGHL 381

Query: 399 IAS 407
           + S
Sbjct: 382 VGS 384


>emb|CBI26785.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = +3

Query: 225 GQTFVISKRPMRGHGREMIQLAFPVADAPPEDETIAGSSKDRRIEPIPGLLQYGIERLIA 404
           GQTFV+SKRPM+GHGREMIQL  P+ADAP EDE++ G+SKDRR E IP LLQ  I  L+ 
Sbjct: 331 GQTFVVSKRPMKGHGREMIQLGVPIADAPLEDESVVGTSKDRRTESIPSLLQDVIGHLVG 390

Query: 405 S 407
           S
Sbjct: 391 S 391


>ref|XP_002527549.1| conserved hypothetical protein [Ricinus communis]
           gi|223533099|gb|EEF34858.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 697

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/60 (66%), Positives = 49/60 (81%)
 Frame = +3

Query: 225 GQTFVISKRPMRGHGREMIQLAFPVADAPPEDETIAGSSKDRRIEPIPGLLQYGIERLIA 404
           GQ +V+SKRPM+GHGREMIQL  P+ADAP E+E  AG+SKDR+IE IP LLQ  IER ++
Sbjct: 330 GQAYVVSKRPMKGHGREMIQLGLPIADAPAEEENAAGTSKDRKIESIPTLLQEVIERFVS 389


>gb|ABK95394.1| unknown [Populus trichocarpa]
          Length = 694

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +3

Query: 225 GQTFVISKRPMRGHGREMIQLAFPVADAPPEDETIAGSSKDRRIEPIPGLLQYGIERLIA 404
           GQT+++SKRPM+GHGREMIQL  P+ADAP EDE   G+SK+RR+E IP LLQ  IE  +A
Sbjct: 327 GQTYILSKRPMKGHGREMIQLGLPIADAPAEDENATGTSKERRVESIPALLQDVIEHFVA 386


Top