BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003605
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro...   380   e-103
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
dbj|BAE71227.1| putative rubisco subunit binding-protein alpha s...   379   e-103
dbj|BAE71311.1| putative rubisco subunit binding-protein alpha s...   379   e-103
dbj|BAE71302.1| putative rubisco subunit binding-protein alpha s...   379   e-103

>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Vitis vinifera]
          Length = 586

 Score =  380 bits (976), Expect = e-103
 Identities = 216/295 (73%), Positives = 223/295 (75%)
 Frame = -2

Query: 887  FENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIVNVA 708
            FENARVLVTDQKI+ IKDIIPLLEKTTQLR+PLLI+AEDVTGEALATLVVNKLRGI+NVA
Sbjct: 259  FENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTGEALATLVVNKLRGILNVA 318

Query: 707  AIKAPGFGERRKALLQDIAIMTGAEYQATDLSLLIENTSVEQLGLARXXXXXXXXXXXXX 528
            AIKAPGFGERRKALLQDIAIMTGAE+QA DL LLIENTSVEQLGLAR             
Sbjct: 319  AIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQLGLARKVTITKDSTTIIA 378

Query: 527  XXASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKXXXXXXXXXXXXXXXXXXXXXXX 348
              ASKDEIQARIAQIKKELAETDSVYD+EKLAERIAK                       
Sbjct: 379  DAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGVAVIKVGAATETELEDRKL 438

Query: 347  XXXXXXXXXXXXXFAAIEEGIVPGGGAALVHLSAYVPAIKDKLEDAEERLGADIVQKALV 168
                         FAAIEEGIVPGGGAA VHLS YVPAIKDKLEDA+ERLGADIVQKALV
Sbjct: 439  RIEDAKNAT----FAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDADERLGADIVQKALV 494

Query: 167  APASLIAQNAXXXXXXXXXXXKASEWEFGYNAMTDKYENLVEAGVIDPAKVTRCA 3
            APASLIA NA           KA EW  GYNAMTDKYENLVEAGVIDPAKV RCA
Sbjct: 495  APASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYENLVEAGVIDPAKVARCA 549


>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  380 bits (976), Expect = e-103
 Identities = 212/295 (71%), Positives = 228/295 (77%)
 Frame = -2

Query: 887  FENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIVNVA 708
            FENARVL+TDQKI+AIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRG++NVA
Sbjct: 259  FENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGVLNVA 318

Query: 707  AIKAPGFGERRKALLQDIAIMTGAEYQATDLSLLIENTSVEQLGLARXXXXXXXXXXXXX 528
            AIKAPGFGERRKA+LQDIAI+TGAE+QA+DL L IENTS+EQLGLAR             
Sbjct: 319  AIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQLGLARKVTISKDSTTIIA 378

Query: 527  XXASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKXXXXXXXXXXXXXXXXXXXXXXX 348
              ASKDE+QARIAQ+KKEL+ETDSVYDSEKLAERIAK                       
Sbjct: 379  DAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKL 438

Query: 347  XXXXXXXXXXXXXFAAIEEGIVPGGGAALVHLSAYVPAIKDKLEDAEERLGADIVQKALV 168
                         FAAIEEGIVPGGGAALVHLS  VPAIKDK+EDA+ERLGADIVQKALV
Sbjct: 439  RIEDAKNAT----FAAIEEGIVPGGGAALVHLSTCVPAIKDKIEDADERLGADIVQKALV 494

Query: 167  APASLIAQNAXXXXXXXXXXXKASEWEFGYNAMTDKYENLVEAGVIDPAKVTRCA 3
            +PASLIAQNA           KASEWE GYNAMTDKYENL+EAGVIDPAKVTRCA
Sbjct: 495  SPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYENLMEAGVIDPAKVTRCA 549


>dbj|BAE71227.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
            pratense]
          Length = 578

 Score =  379 bits (974), Expect = e-103
 Identities = 209/295 (70%), Positives = 226/295 (76%)
 Frame = -2

Query: 887  FENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIVNVA 708
            FENARVL+TDQKISAIKDIIPLLEKTTQLRAPL IIAED+TGEALATLVVNKLRGI+NVA
Sbjct: 251  FENARVLITDQKISAIKDIIPLLEKTTQLRAPLFIIAEDITGEALATLVVNKLRGILNVA 310

Query: 707  AIKAPGFGERRKALLQDIAIMTGAEYQATDLSLLIENTSVEQLGLARXXXXXXXXXXXXX 528
            AIKAPGFGERRKALLQDIAI+TGAEYQA+DL LL+ENTS+EQLGLAR             
Sbjct: 311  AIKAPGFGERRKALLQDIAILTGAEYQASDLGLLVENTSIEQLGLARKVTISKDSTTIIA 370

Query: 527  XXASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKXXXXXXXXXXXXXXXXXXXXXXX 348
              ASKDE+Q+R+AQ+KKEL+ETDSVYDSEKLAERIAK                       
Sbjct: 371  DAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKL 430

Query: 347  XXXXXXXXXXXXXFAAIEEGIVPGGGAALVHLSAYVPAIKDKLEDAEERLGADIVQKALV 168
                         FAAIEEGIVPGGG ALVHLSAYVPAIK+KLEDA+ERLGADIVQKALV
Sbjct: 431  RIEDAKNAT----FAAIEEGIVPGGGTALVHLSAYVPAIKEKLEDADERLGADIVQKALV 486

Query: 167  APASLIAQNAXXXXXXXXXXXKASEWEFGYNAMTDKYENLVEAGVIDPAKVTRCA 3
            APASLIAQNA           +  EWE GYNAMTD YENL+E+GVIDPAKVTRCA
Sbjct: 487  APASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESGVIDPAKVTRCA 541


>dbj|BAE71311.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
            pratense]
          Length = 588

 Score =  379 bits (974), Expect = e-103
 Identities = 209/295 (70%), Positives = 226/295 (76%)
 Frame = -2

Query: 887  FENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIVNVA 708
            FENARVL+TDQKISAIKDIIPLLEKTTQLRAPL IIAED+TGEALATLVVNKLRGI+NVA
Sbjct: 261  FENARVLITDQKISAIKDIIPLLEKTTQLRAPLFIIAEDITGEALATLVVNKLRGILNVA 320

Query: 707  AIKAPGFGERRKALLQDIAIMTGAEYQATDLSLLIENTSVEQLGLARXXXXXXXXXXXXX 528
            AIKAPGFGERRKALLQDIAI+TGAEYQA+DL LL+ENTS+EQLGLAR             
Sbjct: 321  AIKAPGFGERRKALLQDIAILTGAEYQASDLGLLVENTSIEQLGLARKVTISKDSTTIIA 380

Query: 527  XXASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKXXXXXXXXXXXXXXXXXXXXXXX 348
              ASKDE+Q+R+AQ+KKEL+ETDSVYDSEKLAERIAK                       
Sbjct: 381  DAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKL 440

Query: 347  XXXXXXXXXXXXXFAAIEEGIVPGGGAALVHLSAYVPAIKDKLEDAEERLGADIVQKALV 168
                         FAAIEEGIVPGGG ALVHLSAYVPAIK+KLEDA+ERLGADIVQKALV
Sbjct: 441  RIEDAKNAT----FAAIEEGIVPGGGTALVHLSAYVPAIKEKLEDADERLGADIVQKALV 496

Query: 167  APASLIAQNAXXXXXXXXXXXKASEWEFGYNAMTDKYENLVEAGVIDPAKVTRCA 3
            APASLIAQNA           +  EWE GYNAMTD YENL+E+GVIDPAKVTRCA
Sbjct: 497  APASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESGVIDPAKVTRCA 551


>dbj|BAE71302.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
            pratense]
          Length = 588

 Score =  379 bits (974), Expect = e-103
 Identities = 209/295 (70%), Positives = 226/295 (76%)
 Frame = -2

Query: 887  FENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIVNVA 708
            FENARVL+TDQKISAIKDIIPLLEKTTQLRAPL IIAED+TGEALATLVVNKLRGI+NVA
Sbjct: 261  FENARVLITDQKISAIKDIIPLLEKTTQLRAPLFIIAEDITGEALATLVVNKLRGILNVA 320

Query: 707  AIKAPGFGERRKALLQDIAIMTGAEYQATDLSLLIENTSVEQLGLARXXXXXXXXXXXXX 528
            AIKAPGFGERRKALLQDIAI+TGAEYQA+DL LL+ENTS+EQLGLAR             
Sbjct: 321  AIKAPGFGERRKALLQDIAILTGAEYQASDLGLLVENTSIEQLGLARKVTISKDSTTIIA 380

Query: 527  XXASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKXXXXXXXXXXXXXXXXXXXXXXX 348
              ASKDE+Q+R+AQ+KKEL+ETDSVYDSEKLAERIAK                       
Sbjct: 381  DAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKL 440

Query: 347  XXXXXXXXXXXXXFAAIEEGIVPGGGAALVHLSAYVPAIKDKLEDAEERLGADIVQKALV 168
                         FAAIEEGIVPGGG ALVHLSAYVPAIK+KLEDA+ERLGADIVQKALV
Sbjct: 441  RIEDAKNAT----FAAIEEGIVPGGGTALVHLSAYVPAIKEKLEDADERLGADIVQKALV 496

Query: 167  APASLIAQNAXXXXXXXXXXXKASEWEFGYNAMTDKYENLVEAGVIDPAKVTRCA 3
            APASLIAQNA           +  EWE GYNAMTD YENL+E+GVIDPAKVTRCA
Sbjct: 497  APASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESGVIDPAKVTRCA 551