BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003600
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis ...   111   6e-23
ref|XP_004134576.1| PREDICTED: la protein homolog [Cucumis sativus]   102   4e-20
ref|NP_001136552.1| uncharacterized protein LOC100216671 [Zea ma...   101   8e-20
ref|XP_002532535.1| lupus la ribonucleoprotein, putative [Ricinu...   100   1e-19
ref|XP_002453408.1| hypothetical protein SORBIDRAFT_04g005500 [S...   100   2e-19

>ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis vinifera]
           gi|297740679|emb|CBI30861.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score =  111 bits (278), Expect = 6e-23
 Identities = 65/136 (47%), Positives = 73/136 (53%)
 Frame = +1

Query: 127 EGISIPTDPDSPPVGSPEIADSHFDDEVSQPSVEQHHSSQVVTLTDDLRHKIIKQVEYYF 306
           E   I + P  PP  +P             PS + H S+    L DD+R KIIKQVEYYF
Sbjct: 2   ESYEISSPPHDPPFSAPGSPP---------PSDDTHLSANDALLADDIRGKIIKQVEYYF 52

Query: 307 SDENLQNDKFLMNYVTKDKEGFVPISVIASFNKMKKLAPDRPLIVAAXXXXXXXXXXXXX 486
           SDENL  DK+LMN + KDK GFVPI+VIASF KMKKL  D  LIVAA             
Sbjct: 53  SDENLPTDKYLMNLLKKDKNGFVPIAVIASFRKMKKLTQDIQLIVAALRESSQLVVSSDG 112

Query: 487 XXXXXXHPLPFNEVKD 534
                 HPL   EVKD
Sbjct: 113 KKVKRLHPLSLTEVKD 128


>ref|XP_004134576.1| PREDICTED: la protein homolog [Cucumis sativus]
          Length = 388

 Score =  102 bits (254), Expect = 4e-20
 Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
 Frame = +1

Query: 139 IPTDPDSPPVGSPEI----------ADSHFDDEVSQPSVEQHHSSQV--VTLTDDLRHKI 282
           + + P   PVGSP +           D H  D+ S+ S +Q H   V    L +DL+ +I
Sbjct: 17  LSSPPPQDPVGSPSLDVPDIQPLISEDDH--DQGSRESHDQGHEPAVRAAVLPEDLKQRI 74

Query: 283 IKQVEYYFSDENLQNDKFLMNYVTKDKEGFVPISVIASFNKMKKLAPDRPLIVAAXXXXX 462
           +KQVEYYFSDENL +DK+L+  V K+KEG+VPI++IASF +M+KL  DR  I AA     
Sbjct: 75  VKQVEYYFSDENLPSDKYLLGLVKKNKEGYVPIAIIASFKRMRKLTHDRSFITAALRESS 134

Query: 463 XXXXXXXXXXXXXXHPLPFNEVKDP 537
                         HP+   E +DP
Sbjct: 135 VLVVSSNGKKVKRLHPISLPETRDP 159


>ref|NP_001136552.1| uncharacterized protein LOC100216671 [Zea mays]
           gi|194696148|gb|ACF82158.1| unknown [Zea mays]
          Length = 437

 Score =  101 bits (251), Expect = 8e-20
 Identities = 51/98 (52%), Positives = 63/98 (64%)
 Frame = +1

Query: 241 SQVVTLTDDLRHKIIKQVEYYFSDENLQNDKFLMNYVTKDKEGFVPISVIASFNKMKKLA 420
           S  V LTD+LR++I+KQVEYYFSDENL  D+FL+NYV K+ +GFVPI +IASF +MKKL 
Sbjct: 111 SDGVVLTDELRNRIVKQVEYYFSDENLPTDEFLLNYVKKNNKGFVPIEIIASFRRMKKLV 170

Query: 421 PDRPLIVAAXXXXXXXXXXXXXXXXXXXHPLPFNEVKD 534
            D  +I AA                   HPLP  E+KD
Sbjct: 171 QDLSVIEAALRTSSKLVVSSNGKRVRRLHPLPHKELKD 208


>ref|XP_002532535.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223527747|gb|EEF29851.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 270

 Score =  100 bits (249), Expect = 1e-19
 Identities = 62/151 (41%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
 Frame = +1

Query: 136 SIPTDPDSPPVGSPEIADSHFDDEVSQPSVEQH---HSSQV--------------VTLTD 264
           S P D D  PVGSP+  D+  DD  + PS E H   H                     T+
Sbjct: 17  SPPHDSDVTPVGSPD--DTLHDDVHALPSDEDHGHDHEEDADVEHDLDQDQHPGPADRTE 74

Query: 265 DLRHKIIKQVEYYFSDENLQNDKFLMNYVTKDKEGFVPISVIASFNKMKKLAPDRPLIVA 444
            L+ KI+KQVEYYFSDENL  DK ++  + K+KEGFVPI++ ASF KMKKL  D  +IVA
Sbjct: 75  VLKAKIVKQVEYYFSDENLPTDKHMIGLIKKNKEGFVPITIFASFRKMKKLTRDHSVIVA 134

Query: 445 AXXXXXXXXXXXXXXXXXXXHPLPFNEVKDP 537
           A                   HP P   +KDP
Sbjct: 135 ALRESSFLVVSSDGKKVKRLHPFPVAAIKDP 165


>ref|XP_002453408.1| hypothetical protein SORBIDRAFT_04g005500 [Sorghum bicolor]
           gi|241933239|gb|EES06384.1| hypothetical protein
           SORBIDRAFT_04g005500 [Sorghum bicolor]
          Length = 451

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/95 (52%), Positives = 61/95 (64%)
 Frame = +1

Query: 250 VTLTDDLRHKIIKQVEYYFSDENLQNDKFLMNYVTKDKEGFVPISVIASFNKMKKLAPDR 429
           V LTD+LR +I+KQVEYYFSDENL  D+F++ YV K+K+GFVPI  IASF +MKKL  D 
Sbjct: 128 VVLTDELRDRIVKQVEYYFSDENLPTDEFMLKYVKKNKKGFVPIETIASFRRMKKLVQDL 187

Query: 430 PLIVAAXXXXXXXXXXXXXXXXXXXHPLPFNEVKD 534
            +I AA                   HPLP NE+KD
Sbjct: 188 SVIEAALRTSPKLVVSSDGKRVRRLHPLPHNELKD 222