BLASTX nr result

ID: Panax21_contig00003597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003597
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94260.1| unknown [Populus trichocarpa]                          202   2e-50
ref|XP_002313289.1| predicted protein [Populus trichocarpa] gi|1...   202   2e-50
ref|XP_002299953.1| predicted protein [Populus trichocarpa] gi|2...   198   4e-49
ref|XP_002299240.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
ref|XP_004149603.1| PREDICTED: DNA-damage-repair/toleration prot...   192   2e-47

>gb|ABK94260.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  202 bits (514), Expect = 2e-50
 Identities = 90/119 (75%), Positives = 110/119 (92%)
 Frame = +1

Query: 1   FNSWTGNDCCNQWYGVSCDPTTSRVSDISLRGESEDPILEKAGRSGYMTGSISPSVCSLD 180
           FN+W+G +CC+ WYG+SCDPTT RV+DI+LRGESEDPI EKAGRSGYMTGSI+PS+C LD
Sbjct: 45  FNTWSGTNCCSNWYGISCDPTTGRVADINLRGESEDPIFEKAGRSGYMTGSINPSLCKLD 104

Query: 181 RLSTLVVADWKGISGEIPACLSSLTELRILDLIGNQISGEIPADIGKLKQLTILNLAYN 357
           RLSTL++ADWKG+SGEIP C++SL+ LRILDLIGNQISG+IPA+IG L++LT+LNLA N
Sbjct: 105 RLSTLILADWKGVSGEIPGCVASLSNLRILDLIGNQISGKIPANIGNLQRLTVLNLADN 163


>ref|XP_002313289.1| predicted protein [Populus trichocarpa] gi|151936646|gb|ABS18952.1|
           DRT100 [Populus deltoides] gi|222849697|gb|EEE87244.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  202 bits (514), Expect = 2e-50
 Identities = 90/119 (75%), Positives = 110/119 (92%)
 Frame = +1

Query: 1   FNSWTGNDCCNQWYGVSCDPTTSRVSDISLRGESEDPILEKAGRSGYMTGSISPSVCSLD 180
           FN+W+G +CC+ WYG+SCDPTT RV+DI+LRGESEDPI EKAGRSGYMTGSI+PS+C LD
Sbjct: 45  FNTWSGTNCCSNWYGISCDPTTGRVADINLRGESEDPIFEKAGRSGYMTGSINPSLCKLD 104

Query: 181 RLSTLVVADWKGISGEIPACLSSLTELRILDLIGNQISGEIPADIGKLKQLTILNLAYN 357
           RLSTL++ADWKG+SGEIP C++SL+ LRILDLIGNQISG+IPA+IG L++LT+LNLA N
Sbjct: 105 RLSTLILADWKGVSGEIPGCVASLSNLRILDLIGNQISGKIPANIGNLQRLTVLNLADN 163


>ref|XP_002299953.1| predicted protein [Populus trichocarpa] gi|222847211|gb|EEE84758.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  198 bits (503), Expect = 4e-49
 Identities = 88/119 (73%), Positives = 107/119 (89%)
 Frame = +1

Query: 1   FNSWTGNDCCNQWYGVSCDPTTSRVSDISLRGESEDPILEKAGRSGYMTGSISPSVCSLD 180
           FN+W G +CC+ WYG+SCDPTT RV+DI+LRGESEDPI EKAGRSGYMTGSI+PS+C LD
Sbjct: 46  FNTWAGTNCCSNWYGISCDPTTGRVADINLRGESEDPIFEKAGRSGYMTGSINPSICKLD 105

Query: 181 RLSTLVVADWKGISGEIPACLSSLTELRILDLIGNQISGEIPADIGKLKQLTILNLAYN 357
           RLST ++ADWKG+SGEIP C+ SL+ LRILDLIGN+ISG+IPA+IG L++LT+LNLA N
Sbjct: 106 RLSTFILADWKGVSGEIPECVVSLSNLRILDLIGNKISGKIPANIGNLQRLTVLNLADN 164


>ref|XP_002299240.1| predicted protein [Populus trichocarpa] gi|222846498|gb|EEE84045.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  194 bits (492), Expect = 8e-48
 Identities = 87/119 (73%), Positives = 106/119 (89%)
 Frame = +1

Query: 1   FNSWTGNDCCNQWYGVSCDPTTSRVSDISLRGESEDPILEKAGRSGYMTGSISPSVCSLD 180
           FNSWTG DCC+ WYGV CD  T RV+DI+LRGESEDPI +KAGRSGYMTGSISPS+C L+
Sbjct: 48  FNSWTGTDCCHNWYGVMCDMETRRVADINLRGESEDPIFQKAGRSGYMTGSISPSICKLE 107

Query: 181 RLSTLVVADWKGISGEIPACLSSLTELRILDLIGNQISGEIPADIGKLKQLTILNLAYN 357
           RLS+L ++DWKGISG IPAC++SL  LRI+DLIGN+ISGEIPADIG+L+++T+LN+A N
Sbjct: 108 RLSSLTISDWKGISGPIPACITSLPFLRIIDLIGNRISGEIPADIGRLERMTVLNIADN 166


>ref|XP_004149603.1| PREDICTED: DNA-damage-repair/toleration protein DRT100-like
           [Cucumis sativus] gi|449530883|ref|XP_004172421.1|
           PREDICTED: DNA-damage-repair/toleration protein
           DRT100-like [Cucumis sativus]
          Length = 363

 Score =  192 bits (488), Expect = 2e-47
 Identities = 86/119 (72%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   FNSWTGNDCCNQWYGVSCDPTTSRVSDISLRGESEDPILEKAGRSGYMTGSISPSVCSLD 180
           FNSWTGN CC  WYGVSC+P T +V+DI+LRGESEDPI EKAGR+GYMTGSISP +C LD
Sbjct: 43  FNSWTGNSCCGGWYGVSCEPETLKVTDITLRGESEDPIFEKAGRTGYMTGSISPEICKLD 102

Query: 181 RLSTLVVADWKGISGEIPACLSSLTELRILDLIGNQISGEIPADIGKLKQLTILNLAYN 357
            L+ LVVADWKGISGEIP CL+ L+ LR++DL+GN+ISGEIP+DIG L +LT+LNL  N
Sbjct: 103 SLTILVVADWKGISGEIPKCLTKLSNLRVIDLVGNKISGEIPSDIGNLNRLTLLNLGEN 161


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