BLASTX nr result

ID: Panax21_contig00003595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003595
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]              130   3e-28
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   129   1e-27
ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    85   2e-14
ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...    84   3e-14
gb|AFK40721.1| unknown [Lotus japonicus]                               79   1e-12

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  130 bits (327), Expect = 3e-28
 Identities = 61/127 (48%), Positives = 91/127 (71%)
 Frame = -2

Query: 796 YAIPTFHNLTHLKLEVNGGSGWKLLMDFLECSPKLEVLVLDKGHRVLHQVLCWNLPQRVP 617
           Y +P FH++T L+LEV+ G G + L +FL+ SP LE+L+L+  ++   ++  W LP +VP
Sbjct: 270 YELPAFHSVTRLELEVDYGYGLEFLKEFLDTSPNLEILILENVNKDECEIEEWTLPLQVP 329

Query: 616 NCLLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTIDCRYMKGKEDFRVCKKIAGF 437
            C+ LHL EVEI +F G + EL AI+++LKN  +LKKM+IDCR  +  ++F VCKK++GF
Sbjct: 330 TCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSIDCRDWRDGQEFCVCKKLSGF 389

Query: 436 PRASKTC 416
            RAS +C
Sbjct: 390 TRASMSC 396


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  129 bits (323), Expect = 1e-27
 Identities = 60/130 (46%), Positives = 85/130 (65%)
 Frame = -2

Query: 805 VSDYAIPTFHNLTHLKLEVNGGSGWKLLMDFLECSPKLEVLVLDKGHRVLHQVLCWNLPQ 626
           + DY +PTFHN+T L+    GG  W  L +FL  SP LE LV++ G+        W +P 
Sbjct: 323 IGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVIETGYTNELIPEGWLMPL 382

Query: 625 RVPNCLLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTIDCRYMKGKEDFRVCKKI 446
           +VP CL+LHLKE+EI    G++ ELEA++Y+LKN  +L++MTIDC      ++F VCKK+
Sbjct: 383 QVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFCVCKKL 442

Query: 445 AGFPRASKTC 416
            G PR S++C
Sbjct: 443 LGLPRGSRSC 452


>ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355492442|gb|AES73645.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 470

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 56/132 (42%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
 Frame = -2

Query: 790 IPTFHNLTHLKLEVNGGSGWKLLMDFLECSPKLEVLVLDKGHRV---LHQVLCWNLPQRV 620
           IPTFHNLT LKL  +  S W LL+  L   PKLE L LD+G  +   LH    W  P+ V
Sbjct: 334 IPTFHNLTKLKLH-SINSNWNLLVQVLNHCPKLENLELDEGSTIDRRLHVQKNWKDPKFV 392

Query: 619 PNCLLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTIDCRYMKGKEDFRVCKKIAG 440
           P CL LHLK      F G++ EL +  Y+LKN  +L+ M+I C    G +   V ++++ 
Sbjct: 393 PQCLSLHLKTCIFQNFIGQQGELMSTIYILKNARVLQTMSI-C----GVKALEVERELSL 447

Query: 439 FPRASKTCPVNL 404
            PR S  C V L
Sbjct: 448 CPRVSPICEVIL 459


>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
 Frame = -2

Query: 790 IPTFHNLTHLKLEVNGGSGWKLLMDFLECSPKLEVLVLDKGHRVLHQVLCWNLPQRVPNC 611
           +P F NLT L++E +G   W +L + L+CSPKLEV +L K      +   W  P+ VP C
Sbjct: 333 LPDFQNLTRLEIEASGNDRWLVLHEILKCSPKLEVFILYKDS--TEKTPRWRNPEFVPRC 390

Query: 610 LLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTIDCRYMKGKEDF--RVCKKIAGF 437
           L   LK +E   F  +  E+E  +Y++KN  +L+KMTI+  + K   DF  RV +++   
Sbjct: 391 LRSSLKVIEYVGFESELGEIEMAEYLIKNALVLEKMTIEYGW-KMIHDFKERVAERLTEC 449

Query: 436 PRASKTCPV 410
            R S  C +
Sbjct: 450 RRGSTACRI 458


>gb|AFK40721.1| unknown [Lotus japonicus]
          Length = 394

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 50/129 (38%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
 Frame = -2

Query: 781 FHNLTHLKLEVNG-GSGWKLLMDFLECSPKLEVLVLDKG--HRVLHQVLC---WNLPQRV 620
           FHNLTHL+L        W  +++FL+  PKLEVLV+ +   + V    L    W  P  V
Sbjct: 261 FHNLTHLELVYTTFNRDWFEVLEFLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSSV 320

Query: 619 PNCLLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTI-DCRYMKGKEDFRVCKKIA 443
           P C+LLHLKE  +  + G + EL+  KY++++G +L KMTI      K  E     KK+ 
Sbjct: 321 PECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKLF 380

Query: 442 GFPRASKTC 416
              R S TC
Sbjct: 381 SCTRCSATC 389


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