BLASTX nr result
ID: Panax21_contig00003595
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00003595 (818 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32919.3| unnamed protein product [Vitis vinifera] 130 3e-28 emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 129 1e-27 ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 85 2e-14 ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2... 84 3e-14 gb|AFK40721.1| unknown [Lotus japonicus] 79 1e-12 >emb|CBI32919.3| unnamed protein product [Vitis vinifera] Length = 411 Score = 130 bits (327), Expect = 3e-28 Identities = 61/127 (48%), Positives = 91/127 (71%) Frame = -2 Query: 796 YAIPTFHNLTHLKLEVNGGSGWKLLMDFLECSPKLEVLVLDKGHRVLHQVLCWNLPQRVP 617 Y +P FH++T L+LEV+ G G + L +FL+ SP LE+L+L+ ++ ++ W LP +VP Sbjct: 270 YELPAFHSVTRLELEVDYGYGLEFLKEFLDTSPNLEILILENVNKDECEIEEWTLPLQVP 329 Query: 616 NCLLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTIDCRYMKGKEDFRVCKKIAGF 437 C+ LHL EVEI +F G + EL AI+++LKN +LKKM+IDCR + ++F VCKK++GF Sbjct: 330 TCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSIDCRDWRDGQEFCVCKKLSGF 389 Query: 436 PRASKTC 416 RAS +C Sbjct: 390 TRASMSC 396 >emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] Length = 607 Score = 129 bits (323), Expect = 1e-27 Identities = 60/130 (46%), Positives = 85/130 (65%) Frame = -2 Query: 805 VSDYAIPTFHNLTHLKLEVNGGSGWKLLMDFLECSPKLEVLVLDKGHRVLHQVLCWNLPQ 626 + DY +PTFHN+T L+ GG W L +FL SP LE LV++ G+ W +P Sbjct: 323 IGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVIETGYTNELIPEGWLMPL 382 Query: 625 RVPNCLLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTIDCRYMKGKEDFRVCKKI 446 +VP CL+LHLKE+EI G++ ELEA++Y+LKN +L++MTIDC ++F VCKK+ Sbjct: 383 QVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFCVCKKL 442 Query: 445 AGFPRASKTC 416 G PR S++C Sbjct: 443 LGLPRGSRSC 452 >ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355492442|gb|AES73645.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 470 Score = 84.7 bits (208), Expect = 2e-14 Identities = 56/132 (42%), Positives = 73/132 (55%), Gaps = 3/132 (2%) Frame = -2 Query: 790 IPTFHNLTHLKLEVNGGSGWKLLMDFLECSPKLEVLVLDKGHRV---LHQVLCWNLPQRV 620 IPTFHNLT LKL + S W LL+ L PKLE L LD+G + LH W P+ V Sbjct: 334 IPTFHNLTKLKLH-SINSNWNLLVQVLNHCPKLENLELDEGSTIDRRLHVQKNWKDPKFV 392 Query: 619 PNCLLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTIDCRYMKGKEDFRVCKKIAG 440 P CL LHLK F G++ EL + Y+LKN +L+ M+I C G + V ++++ Sbjct: 393 PQCLSLHLKTCIFQNFIGQQGELMSTIYILKNARVLQTMSI-C----GVKALEVERELSL 447 Query: 439 FPRASKTCPVNL 404 PR S C V L Sbjct: 448 CPRVSPICEVIL 459 >ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1| predicted protein [Populus trichocarpa] Length = 462 Score = 84.3 bits (207), Expect = 3e-14 Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Frame = -2 Query: 790 IPTFHNLTHLKLEVNGGSGWKLLMDFLECSPKLEVLVLDKGHRVLHQVLCWNLPQRVPNC 611 +P F NLT L++E +G W +L + L+CSPKLEV +L K + W P+ VP C Sbjct: 333 LPDFQNLTRLEIEASGNDRWLVLHEILKCSPKLEVFILYKDS--TEKTPRWRNPEFVPRC 390 Query: 610 LLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTIDCRYMKGKEDF--RVCKKIAGF 437 L LK +E F + E+E +Y++KN +L+KMTI+ + K DF RV +++ Sbjct: 391 LRSSLKVIEYVGFESELGEIEMAEYLIKNALVLEKMTIEYGW-KMIHDFKERVAERLTEC 449 Query: 436 PRASKTCPV 410 R S C + Sbjct: 450 RRGSTACRI 458 >gb|AFK40721.1| unknown [Lotus japonicus] Length = 394 Score = 79.0 bits (193), Expect = 1e-12 Identities = 50/129 (38%), Positives = 69/129 (53%), Gaps = 7/129 (5%) Frame = -2 Query: 781 FHNLTHLKLEVNG-GSGWKLLMDFLECSPKLEVLVLDKG--HRVLHQVLC---WNLPQRV 620 FHNLTHL+L W +++FL+ PKLEVLV+ + + V L W P V Sbjct: 261 FHNLTHLELVYTTFNRDWFEVLEFLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSSV 320 Query: 619 PNCLLLHLKEVEITEFSGKENELEAIKYMLKNGNMLKKMTI-DCRYMKGKEDFRVCKKIA 443 P C+LLHLKE + + G + EL+ KY++++G +L KMTI K E KK+ Sbjct: 321 PECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKLF 380 Query: 442 GFPRASKTC 416 R S TC Sbjct: 381 SCTRCSATC 389