BLASTX nr result

ID: Panax21_contig00003589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003589
         (2819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307419.1| predicted protein [Populus trichocarpa] gi|2...   258   8e-66
ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago tr...   257   1e-65
ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|2...   254   9e-65
ref|XP_003523464.1| PREDICTED: biotin--protein ligase-like [Glyc...   253   2e-64
emb|CBI19072.3| unnamed protein product [Vitis vinifera]              253   3e-64

>ref|XP_002307419.1| predicted protein [Populus trichocarpa] gi|222856868|gb|EEE94415.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  258 bits (658), Expect = 8e-66
 Identities = 133/206 (64%), Positives = 150/206 (72%)
 Frame = -3

Query: 1140 SLAMTEAIKDVCDRNGVPHINVRIKWPNDLYLNDLKVGGILCTSTYRSKKFNVSAGVGLN 961
            SLA+TEAIKD+CD+NG+PHI+VRIKWPNDLYLN +KVGGILCTSTYRSKKFN+SAG+GLN
Sbjct: 148  SLAVTEAIKDLCDKNGLPHIDVRIKWPNDLYLNGVKVGGILCTSTYRSKKFNISAGIGLN 207

Query: 960  VDNEKPTTSLNSVLKKLTSVAYQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 781
            VDNEKPTT LN+VL++L   A  L                                    
Sbjct: 208  VDNEKPTTCLNAVLRELAGAACAL---------------------RREDIVAAFLNKFEK 246

Query: 780  XXDLFMNQGFQPLEELYYKTWLHSGQRVTVEGKKEDQDQPVQNEVTIQGLTSSGYLLAIG 601
              DLF+N GFQ LEELYYKTWLHSGQRV ++ K E  +Q V+N VTIQGLT SGYLLAIG
Sbjct: 247  LYDLFINGGFQTLEELYYKTWLHSGQRVIIQEKNE--NQVVENVVTIQGLTPSGYLLAIG 304

Query: 600  EDGQMCELHPDGNSFDFFKGLVRRKL 523
            ED QMCELHPDGNSFDFFKGLVRRK+
Sbjct: 305  EDNQMCELHPDGNSFDFFKGLVRRKI 330



 Score =  172 bits (436), Expect = 5e-40
 Identities = 82/121 (67%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = -2

Query: 1633 SQSPCVLLLCGKSLAEKELAKSMKNNNILKLPENAEVSVFLHSE--NEKSFDEESLCINS 1460
            S +PC LLLCGKS AE E+AKS+ NNN LKLP+N E+S   HSE  +E   +EES  ++ 
Sbjct: 4    SSTPCKLLLCGKSSAENEIAKSLMNNNTLKLPDNVEISTLSHSEILDEPQQNEESFSLSR 63

Query: 1459 YMNSLSTARFGRFLIWSPRLPSTHDVISNNFGDLPIGAVCVADFQYKGRGRSKNVWESPK 1280
            +MNSLST  FGR LIWSP LPSTHD++SNNFG+LPIG VC+AD QYKGRGRSKNVWESP 
Sbjct: 64   FMNSLSTNLFGRLLIWSPLLPSTHDLVSNNFGELPIGTVCIADVQYKGRGRSKNVWESPA 123

Query: 1279 G 1277
            G
Sbjct: 124  G 124


>ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago truncatula]
            gi|355490146|gb|AES71349.1| Holocarboxylase synthetase
            hcs2 [Medicago truncatula]
          Length = 361

 Score =  257 bits (656), Expect = 1e-65
 Identities = 131/206 (63%), Positives = 153/206 (74%)
 Frame = -3

Query: 1140 SLAMTEAIKDVCDRNGVPHINVRIKWPNDLYLNDLKVGGILCTSTYRSKKFNVSAGVGLN 961
            SLA+TEAIKD+CD+NG+P ++V+IKWPNDLYLN  KVGGILCTSTYRSKKFN+SAG+GLN
Sbjct: 178  SLAITEAIKDICDKNGLPCVDVKIKWPNDLYLNGFKVGGILCTSTYRSKKFNISAGIGLN 237

Query: 960  VDNEKPTTSLNSVLKKLTSVAYQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 781
            V+NEKPTTSLN+VL++L+  AYQ                                     
Sbjct: 238  VNNEKPTTSLNTVLRELSVGAYQF---------------------QREDVLAAFFNKFEK 276

Query: 780  XXDLFMNQGFQPLEELYYKTWLHSGQRVTVEGKKEDQDQPVQNEVTIQGLTSSGYLLAIG 601
              DLF+NQGFQ LEELYYKTWLHSGQRV V+ K E  ++ V++ VTIQGLTSSGYLLA+G
Sbjct: 277  FFDLFLNQGFQTLEELYYKTWLHSGQRVIVQEKNE--EKVVEHAVTIQGLTSSGYLLAVG 334

Query: 600  EDGQMCELHPDGNSFDFFKGLVRRKL 523
            +D QMCELHPDGNSFDFFKGLVRRKL
Sbjct: 335  DDNQMCELHPDGNSFDFFKGLVRRKL 360



 Score =  147 bits (372), Expect = 1e-32
 Identities = 72/115 (62%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
 Frame = -2

Query: 1618 VLLLCGKSLAEKELAKSMKNNNILKLPENAEVSVFLHSENEKS-FDEESLCINSYMNSLS 1442
            +L+LCGKSLAE E A ++K NN LKLP+  E+S+ LHSE  KS    +S   +S+MNSLS
Sbjct: 40   LLVLCGKSLAENETAIAIKTNNTLKLPDKKELSIILHSEFNKSVIQRQSFQFSSFMNSLS 99

Query: 1441 TARFGRFLIWSPRLPSTHDVISNNFGDLPIGAVCVADFQYKGRGRSKNVWESPKG 1277
            T +FGR LIWSP L STHDV+S+NF +LP+G VCV D Q KGRGRSKN WESP G
Sbjct: 100  TNQFGRLLIWSPELTSTHDVVSHNFCELPVGTVCVGDIQNKGRGRSKNAWESPLG 154


>ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|222842736|gb|EEE80283.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  254 bits (649), Expect = 9e-65
 Identities = 134/206 (65%), Positives = 150/206 (72%)
 Frame = -3

Query: 1140 SLAMTEAIKDVCDRNGVPHINVRIKWPNDLYLNDLKVGGILCTSTYRSKKFNVSAGVGLN 961
            SLA+TEAIKDVCD+NG+P I+VRIKWPNDLYLN LKVGGIL TSTY+SKKFNVS G+GLN
Sbjct: 150  SLAVTEAIKDVCDKNGLPRIDVRIKWPNDLYLNGLKVGGILSTSTYKSKKFNVSTGIGLN 209

Query: 960  VDNEKPTTSLNSVLKKLTSVAYQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 781
            VDNEKPTT LN+VL++L++ A  L                                    
Sbjct: 210  VDNEKPTTCLNAVLRELSAAACTLRREDIVAAFLNKFENFY------------------- 250

Query: 780  XXDLFMNQGFQPLEELYYKTWLHSGQRVTVEGKKEDQDQPVQNEVTIQGLTSSGYLLAIG 601
              DLF+N GFQ LEELYYKTWLHSGQRV ++ K E+Q   V+N VTIQGLTSSGYLLAIG
Sbjct: 251  --DLFINGGFQTLEELYYKTWLHSGQRVIIQEKNENQ--VVENVVTIQGLTSSGYLLAIG 306

Query: 600  EDGQMCELHPDGNSFDFFKGLVRRKL 523
            ED QMCELHPDGNSFDFFKGLVRRKL
Sbjct: 307  EDNQMCELHPDGNSFDFFKGLVRRKL 332



 Score =  179 bits (455), Expect = 3e-42
 Identities = 86/122 (70%), Positives = 98/122 (80%), Gaps = 3/122 (2%)
 Frame = -2

Query: 1633 SQSPCVLLLCGKSLAEKELAKSMKNNNILKLPENAEVSVFLHSE---NEKSFDEESLCIN 1463
            S +PC L+LCGKS AE E+AKS+ NNN LKLP+N +VS  LHSE    ++  DEES CI 
Sbjct: 5    SSTPCKLVLCGKSSAENEIAKSLMNNNTLKLPDNVQVSTLLHSEIINKQQRQDEESFCIE 64

Query: 1462 SYMNSLSTARFGRFLIWSPRLPSTHDVISNNFGDLPIGAVCVADFQYKGRGRSKNVWESP 1283
             +MNSLST +FGR LIWSP LPSTHDV+SNNFG+LPIG VCVAD QYKGRGRSKNVWESP
Sbjct: 65   RFMNSLSTNQFGRLLIWSPILPSTHDVVSNNFGELPIGTVCVADVQYKGRGRSKNVWESP 124

Query: 1282 KG 1277
             G
Sbjct: 125  AG 126


>ref|XP_003523464.1| PREDICTED: biotin--protein ligase-like [Glycine max]
          Length = 361

 Score =  253 bits (646), Expect = 2e-64
 Identities = 131/206 (63%), Positives = 150/206 (72%)
 Frame = -3

Query: 1140 SLAMTEAIKDVCDRNGVPHINVRIKWPNDLYLNDLKVGGILCTSTYRSKKFNVSAGVGLN 961
            SLAMTEAIKD+CD+NG+P I+V+IKWPNDLYLN  KVGGILCTSTY+SKKFNVSAG+GLN
Sbjct: 178  SLAMTEAIKDICDKNGLPSIDVKIKWPNDLYLNGSKVGGILCTSTYKSKKFNVSAGIGLN 237

Query: 960  VDNEKPTTSLNSVLKKLTSVAYQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 781
            V+N+KPTTSLN++LK   S AYQ                                     
Sbjct: 238  VNNKKPTTSLNTILKGFYSGAYQF---------------------QREEVLAAFFNKFEI 276

Query: 780  XXDLFMNQGFQPLEELYYKTWLHSGQRVTVEGKKEDQDQPVQNEVTIQGLTSSGYLLAIG 601
              DLF+NQGFQ LEELY KTWLHSGQRV V+ K E  D+ +++ VTIQGLTSSGYLLA+G
Sbjct: 277  FYDLFLNQGFQTLEELYIKTWLHSGQRVVVQEKNE--DKVIEHVVTIQGLTSSGYLLAVG 334

Query: 600  EDGQMCELHPDGNSFDFFKGLVRRKL 523
            +D QMCELHPDGNSFDFFKGLVRRKL
Sbjct: 335  DDHQMCELHPDGNSFDFFKGLVRRKL 360



 Score =  153 bits (386), Expect = 3e-34
 Identities = 73/114 (64%), Positives = 92/114 (80%)
 Frame = -2

Query: 1618 VLLLCGKSLAEKELAKSMKNNNILKLPENAEVSVFLHSENEKSFDEESLCINSYMNSLST 1439
            +L+LCGKSLAE E AK++K NN LKLPE+ ++S+ LHSE +KS  +    ++SYM+SLST
Sbjct: 41   LLVLCGKSLAENETAKAIKTNNTLKLPEDEKLSLVLHSEMDKSVMQGFFQVHSYMDSLST 100

Query: 1438 ARFGRFLIWSPRLPSTHDVISNNFGDLPIGAVCVADFQYKGRGRSKNVWESPKG 1277
             +FGR L+WSP L STHDV+S+NF +LPIG VC+AD Q KGRGRSKNVWESP G
Sbjct: 101  NQFGRLLVWSPDLTSTHDVVSHNFCELPIGTVCIADVQTKGRGRSKNVWESPLG 154


>emb|CBI19072.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  253 bits (645), Expect = 3e-64
 Identities = 130/206 (63%), Positives = 150/206 (72%)
 Frame = -3

Query: 1140 SLAMTEAIKDVCDRNGVPHINVRIKWPNDLYLNDLKVGGILCTSTYRSKKFNVSAGVGLN 961
            SLA+TEAIK +CD  G+PH++V+IKWPNDLYLN LKVGGILCTSTY+S+KFNVSAG+GLN
Sbjct: 233  SLAITEAIKSICDSKGLPHLDVKIKWPNDLYLNGLKVGGILCTSTYKSRKFNVSAGIGLN 292

Query: 960  VDNEKPTTSLNSVLKKLTSVAYQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 781
            VDNEKPTT LN+VL++L+SVAYQ                                     
Sbjct: 293  VDNEKPTTCLNAVLRELSSVAYQF---------------------RREDIVAAFFNKFET 331

Query: 780  XXDLFMNQGFQPLEELYYKTWLHSGQRVTVEGKKEDQDQPVQNEVTIQGLTSSGYLLAIG 601
               LF+NQGFQ LEELY KTWLHSGQRV V+  +  + Q V+N VTIQGL SSGYLLAIG
Sbjct: 332  FFSLFINQGFQTLEELYCKTWLHSGQRVIVQ--ENIEGQMVENVVTIQGLASSGYLLAIG 389

Query: 600  EDGQMCELHPDGNSFDFFKGLVRRKL 523
            +DGQMCELHPDGNSFDFFKGL+RRKL
Sbjct: 390  DDGQMCELHPDGNSFDFFKGLIRRKL 415



 Score =  160 bits (406), Expect = 1e-36
 Identities = 81/122 (66%), Positives = 95/122 (77%)
 Frame = -2

Query: 1642 AMKSQSPCVLLLCGKSLAEKELAKSMKNNNILKLPENAEVSVFLHSENEKSFDEESLCIN 1463
            AM SQS  +L+LCGKS AE E AKS+K  N LKLP+N EVS+ LH E EK  +EE   ++
Sbjct: 89   AMDSQSTSLLVLCGKSSAEIEFAKSLKAKNTLKLPDNGEVSILLHPEIEKP-EEEPFQMD 147

Query: 1462 SYMNSLSTARFGRFLIWSPRLPSTHDVISNNFGDLPIGAVCVADFQYKGRGRSKNVWESP 1283
             +M+SLST  FGRFLIWSP+LPSTHDV+S NF +LPIG VCVAD Q KGRGRSKN WESP
Sbjct: 148  LFMSSLSTNTFGRFLIWSPQLPSTHDVVSQNFCELPIGTVCVADVQLKGRGRSKNKWESP 207

Query: 1282 KG 1277
            +G
Sbjct: 208  RG 209


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