BLASTX nr result
ID: Panax21_contig00003588
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00003588 (1227 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu... 115 2e-23 emb|CAN83525.1| hypothetical protein VITISV_030230 [Vitis vinifera] 114 4e-23 ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244... 114 7e-23 ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|2... 112 3e-22 ref|XP_002531056.1| conserved hypothetical protein [Ricinus comm... 111 3e-22 >ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis] gi|223527846|gb|EEF29942.1| RNA binding protein, putative [Ricinus communis] Length = 221 Score = 115 bits (289), Expect = 2e-23 Identities = 57/85 (67%), Positives = 68/85 (80%), Gaps = 7/85 (8%) Frame = +3 Query: 993 SGPRELGGSVDLINYFKLWPHHEFFCKRSMP-------YLHNVVGVTKIKKGEGMELDQL 1151 SGPREL G+VDLI++FKL PHHEFFCKRS+P YLHNVVG ++I+KG+GM+LDQL Sbjct: 10 SGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRKGDGMQLDQL 69 Query: 1152 FQNTSYVEKKHARIHPFDLCVLKEA 1226 QNTSY +ARI PFDL VL+EA Sbjct: 70 IQNTSYSRDSNARIQPFDLDVLREA 94 >emb|CAN83525.1| hypothetical protein VITISV_030230 [Vitis vinifera] Length = 316 Score = 114 bits (286), Expect = 4e-23 Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 7/84 (8%) Frame = +3 Query: 996 GPRELGGSVDLINYFKLWPHHEFFCKRSMP-------YLHNVVGVTKIKKGEGMELDQLF 1154 GPREL G+VDLIN++KL PHHEFFCKRS+P YL +VVG T+I+KGEGMELDQLF Sbjct: 49 GPRELSGAVDLINHYKLLPHHEFFCKRSLPLSISETHYLRSVVGXTEIRKGEGMELDQLF 108 Query: 1155 QNTSYVEKKHARIHPFDLCVLKEA 1226 +T Y+ +++A IHPFDL +L+EA Sbjct: 109 HSTFYLRERNAGIHPFDLDILREA 132 >ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244629 [Vitis vinifera] gi|297740784|emb|CBI30966.3| unnamed protein product [Vitis vinifera] Length = 210 Score = 114 bits (284), Expect = 7e-23 Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 7/84 (8%) Frame = +3 Query: 996 GPRELGGSVDLINYFKLWPHHEFFCKRSMP-------YLHNVVGVTKIKKGEGMELDQLF 1154 GPREL G+VDLIN++KL PHHEFFCKRS+P YL +VVG T+I+KGEGMELDQLF Sbjct: 11 GPRELSGAVDLINHYKLLPHHEFFCKRSLPLSISETHYLRSVVGGTEIRKGEGMELDQLF 70 Query: 1155 QNTSYVEKKHARIHPFDLCVLKEA 1226 +T Y+ +++A IHPFDL +L+EA Sbjct: 71 HSTFYLRERNAGIHPFDLDILREA 94 >ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|222837730|gb|EEE76095.1| predicted protein [Populus trichocarpa] Length = 220 Score = 112 bits (279), Expect = 3e-22 Identities = 58/86 (67%), Positives = 67/86 (77%), Gaps = 7/86 (8%) Frame = +3 Query: 990 TSGPRELGGSVDLINYFKLWPHHEFFCKRSMP-------YLHNVVGVTKIKKGEGMELDQ 1148 TSGPREL G+VDLI++FKL PHHEFFCKRS+P YLHNVVG T+I+KGEGM+LDQ Sbjct: 8 TSGPRELTGAVDLISHFKLLPHHEFFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQ 67 Query: 1149 LFQNTSYVEKKHARIHPFDLCVLKEA 1226 L QNTS +A I PFDL VL+EA Sbjct: 68 LIQNTS--RDSNAHIEPFDLDVLREA 91 >ref|XP_002531056.1| conserved hypothetical protein [Ricinus communis] gi|223529351|gb|EEF31317.1| conserved hypothetical protein [Ricinus communis] Length = 292 Score = 111 bits (278), Expect = 3e-22 Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 7/84 (8%) Frame = +3 Query: 996 GPRELGGSVDLINYFKLWPHHEFFCKRSMP-------YLHNVVGVTKIKKGEGMELDQLF 1154 G +EL G+VDL+N FKLWPHHEFFCKRS+P Y+ NVVG T+I+KGEGMELDQLF Sbjct: 138 GLKELCGAVDLVNQFKLWPHHEFFCKRSLPLSVSQTHYIQNVVGDTEIRKGEGMELDQLF 197 Query: 1155 QNTSYVEKKHARIHPFDLCVLKEA 1226 NT Y+ + A IH FDL VL+EA Sbjct: 198 HNTPYMRQGKAHIHTFDLGVLREA 221