BLASTX nr result
ID: Panax21_contig00003582
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00003582
(1005 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510842.1| arginine/serine-rich splicing factor, putati... 107 5e-21
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera] 102 1e-19
ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac... 100 7e-19
gb|AAS00039.1| splicing factor-like protein [Vitis riparia] 97 5e-18
gb|ABI34327.1| Arginine/serine-rich splicing factor RSP41, putat... 90 1e-15
>ref|XP_002510842.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223549957|gb|EEF51444.1| arginine/serine-rich
splicing factor, putative [Ricinus communis]
Length = 331
Score = 107 bits (267), Expect = 5e-21
Identities = 80/189 (42%), Positives = 98/189 (51%), Gaps = 7/189 (3%)
Frame = -3
Query: 907 RGRSSSPYHRERASPDYGRGPSASPNGRERKS-DYGRGVSGSPNGRERKSV-YSHGGSRS 734
R RSSSPY RER SPDYGRGPS P RER S DYGR S SP R+R S Y SRS
Sbjct: 151 RKRSSSPYRRERGSPDYGRGPSPGPYRRERASPDYGRRRSPSPYKRDRASPDYGRASSRS 210
Query: 733 PNGRERK-TDYGR-SAGSPNGREK-KPDYGRGXXXXXPKGREKISDYGHGXXXXXXXXXX 563
P RER +D+GR S+ SP RE+ PD GRG + + D G
Sbjct: 211 PYRRERPGSDHGRGSSRSPYHRERASPDNGRGHSASPYQREKASPDNGR----------- 259
Query: 562 XXXXXRGSSP--RDVITPEYDHGRSPSPRTERVSPDDYRREASPDLKPEHQDSPGYSGGE 389
R SP R+ P+ G S SP + V+ + R SP+ E +DSP G E
Sbjct: 260 ----DRSRSPYGRERTNPDNGRGSSRSPYEKDVNSPENGRRTSPNSMHEERDSPNEGGIE 315
Query: 388 SPIPDRYRS 362
SP+ +R++S
Sbjct: 316 SPMHERFQS 324
Score = 72.4 bits (176), Expect = 2e-10
Identities = 47/87 (54%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = -3
Query: 910 GRGRSSSPYHRERASPDYGRGPSASPNGRERKS-DYGRGVSGSPNGRERKSV-YSHGGSR 737
GRG S SPYHRERASPD GRG SASP RE+ S D GR S SP GRER + G SR
Sbjct: 222 GRGSSRSPYHRERASPDNGRGHSASPYQREKASPDNGRDRSRSPYGRERTNPDNGRGSSR 281
Query: 736 SPNGRERKTDYGRSAGSP-NGREKKPD 659
SP Y + SP NGR P+
Sbjct: 282 SP--------YEKDVNSPENGRRTSPN 300
>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
Length = 479
Score = 102 bits (255), Expect = 1e-19
Identities = 85/205 (41%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Frame = -3
Query: 910 GRGRSSSPYHRERASPDYGRGPSASPNGRERKS-------DYGRGVSGSPNGRER-KSVY 755
GRGRS SP RE+ PDY PS SP +E+ DYGRG S S RER S Y
Sbjct: 284 GRGRSPSPGRREKIMPDYPDRPSLSPERKEKTGRSEKAIPDYGRGASPSSPRRERTNSDY 343
Query: 754 SHGGSRS--------PNGRER-KTDYGRSAG-SPNGREK-KPDYGRGXXXXXPKGREKIS 608
SRS P RER K DYG SP REK PDYGRG P+ RE
Sbjct: 344 VRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREKANPDYGRGPSRSSPQRRE--- 400
Query: 607 DYGHGXXXXXXXXXXXXXXXRGSSPR--DVITPEYDHGRSPSP-RTERVSPDDYRREASP 437
Y G SP+ + P+Y G S SP + E +SPD Y R SP
Sbjct: 401 -YDRGP---------------SQSPQQGERALPDYSRGPSDSPYQRESISPD-YDRGPSP 443
Query: 436 DLKPEHQDSPGYSGGESPIPDRYRS 362
+ K E +DSP Y G SP+ RYRS
Sbjct: 444 NSKREERDSPNYGGSASPMNGRYRS 468
Score = 89.4 bits (220), Expect = 1e-15
Identities = 75/203 (36%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Frame = -3
Query: 907 RGRSSSPYHRERASPDYGRGPSASPNGRERKS-DYGRGVSGSPNGRERKSVYSHGGSRSP 731
+GRS SPY RER SPDYGRG S S RER S DYGR S SP R+R ++ HG SRSP
Sbjct: 192 KGRSLSPYRRERGSPDYGRGSSPSAYRRERASPDYGRDPSPSPRRRDR-AIPDHGRSRSP 250
Query: 730 -NGRERKTDYGRSAG---SPNGREKK----PDYGRGXXXXXPKGREKISDYGHGXXXXXX 575
+ R +T + + G SP E+ PDYGRG + + + DY
Sbjct: 251 SHHRRERTSHDSARGPSRSPYRSERSDRAIPDYGRGRSPSPGRREKIMPDY-----PDRP 305
Query: 574 XXXXXXXXXRGSSPRDVITPEYDHGRSP-SPRTERVSPDDYRREASPDLKPEHQDSPGYS 398
G S + + P+Y G SP SPR ER + DY R S SP
Sbjct: 306 SLSPERKEKTGRSEKAI--PDYGRGASPSSPRRERTN-SDYVRANSRSRSRSQSQSPRQR 362
Query: 397 GGESPIPDRYRSIM--NKEKVGP 335
P RS+ +EK P
Sbjct: 363 ERTKPDYGHERSVSPEQREKANP 385
Score = 67.0 bits (162), Expect = 7e-09
Identities = 48/110 (43%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Frame = -3
Query: 913 RGRGRSSSPYHRERASPDYGRGPSASPNGRERKS-DYGRGVS-GSPNGRERKSVYSHGGS 740
R R +S SP RER PDYG S SP RE+ + DYGRG S SP RE Y G S
Sbjct: 351 RSRSQSQSPRQRERTKPDYGHERSVSPEQREKANPDYGRGPSRSSPQRRE----YDRGPS 406
Query: 739 RSPNGRERK-TDYGRS-AGSPNGREK-KPDYGRGXXXXXPKGREKISDYG 599
+SP ER DY R + SP RE PDY RG + +YG
Sbjct: 407 QSPQQGERALPDYSRGPSDSPYQRESISPDYDRGPSPNSKREERDSPNYG 456
Score = 61.6 bits (148), Expect = 3e-07
Identities = 52/145 (35%), Positives = 58/145 (40%), Gaps = 6/145 (4%)
Frame = -3
Query: 772 ERKSVYSHGGSRSPNGRERKTDYGRSAGSPNGREK-KPDYGRGXXXXXPKGREKISDYGH 596
ER++ YS G R ER D GRS SP RE+ PDYGRG + DYG
Sbjct: 170 ERRNGYSPDGRRRDKSSERSYDKGRSL-SPYRRERGSPDYGRGSSPSAYRRERASPDYGR 228
Query: 595 GXXXXXXXXXXXXXXXRGSSPRDVITPEYDHGRSPSP---RTERVSPDDYRREASPDLKP 425
SPR DHGRS SP R ER S D R + +
Sbjct: 229 ---------------DPSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPYRS 273
Query: 424 EHQDS--PGYSGGESPIPDRYRSIM 356
E D P Y G SP P R IM
Sbjct: 274 ERSDRAIPDYGRGRSPSPGRREKIM 298
>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
vinifera]
Length = 480
Score = 100 bits (248), Expect = 7e-19
Identities = 83/205 (40%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Frame = -3
Query: 910 GRGRSSSPYHRERASPDYGRGPSASPNGRERKS-------DYGRGVSGSPNGRER-KSVY 755
GRGRS SP RE+ PDY PS SP +E+ DYGRG S S RER S Y
Sbjct: 286 GRGRSPSPGRREKIMPDYPDRPSLSPERKEKTGRSEKAIPDYGRGASPSSPRRERTNSDY 345
Query: 754 SHGGSRS--------PNGRER-KTDYGRSAG-SPNGREK-KPDYGRGXXXXXPKGREKIS 608
SRS P RER K DYG SP REK PDYGRG P+
Sbjct: 346 VRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREKANPDYGRGPSRSSPR-----R 400
Query: 607 DYGHGXXXXXXXXXXXXXXXRGSSPR--DVITPEYDHGRSPSP-RTERVSPDDYRREASP 437
+Y G SP+ + P+Y G S SP + E +SPD Y R SP
Sbjct: 401 EYDRGP---------------SQSPQQGERALPDYSRGPSDSPYQRESISPD-YDRGPSP 444
Query: 436 DLKPEHQDSPGYSGGESPIPDRYRS 362
+ K E +DSP Y G SP+ RYRS
Sbjct: 445 NSKREERDSPNYGGSASPMNGRYRS 469
Score = 89.4 bits (220), Expect = 1e-15
Identities = 75/203 (36%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Frame = -3
Query: 907 RGRSSSPYHRERASPDYGRGPSASPNGRERKS-DYGRGVSGSPNGRERKSVYSHGGSRSP 731
+GRS SPY RER SPDYGRG S S RER S DYGR S SP R+R ++ HG SRSP
Sbjct: 194 KGRSLSPYRRERGSPDYGRGSSPSAYRRERASPDYGRDPSPSPRRRDR-AIPDHGRSRSP 252
Query: 730 -NGRERKTDYGRSAG---SPNGREKK----PDYGRGXXXXXPKGREKISDYGHGXXXXXX 575
+ R +T + + G SP E+ PDYGRG + + + DY
Sbjct: 253 SHHRRERTSHDSARGPSRSPYRSERSDRAIPDYGRGRSPSPGRREKIMPDY-----PDRP 307
Query: 574 XXXXXXXXXRGSSPRDVITPEYDHGRSP-SPRTERVSPDDYRREASPDLKPEHQDSPGYS 398
G S + + P+Y G SP SPR ER + DY R S SP
Sbjct: 308 SLSPERKEKTGRSEKAI--PDYGRGASPSSPRRERTN-SDYVRANSRSRSRSQSQSPRQR 364
Query: 397 GGESPIPDRYRSIM--NKEKVGP 335
P RS+ +EK P
Sbjct: 365 ERTKPDYGHERSVSPEQREKANP 387
Score = 67.0 bits (162), Expect = 7e-09
Identities = 47/109 (43%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = -3
Query: 913 RGRGRSSSPYHRERASPDYGRGPSASPNGRERKS-DYGRGVSGSPNGRERKSVYSHGGSR 737
R R +S SP RER PDYG S SP RE+ + DYGRG S S RE Y G S+
Sbjct: 353 RSRSQSQSPRQRERTKPDYGHERSVSPEQREKANPDYGRGPSRSSPRRE----YDRGPSQ 408
Query: 736 SPNGRERK-TDYGRS-AGSPNGREK-KPDYGRGXXXXXPKGREKISDYG 599
SP ER DY R + SP RE PDY RG + +YG
Sbjct: 409 SPQQGERALPDYSRGPSDSPYQRESISPDYDRGPSPNSKREERDSPNYG 457
Score = 61.6 bits (148), Expect = 3e-07
Identities = 52/145 (35%), Positives = 58/145 (40%), Gaps = 6/145 (4%)
Frame = -3
Query: 772 ERKSVYSHGGSRSPNGRERKTDYGRSAGSPNGREK-KPDYGRGXXXXXPKGREKISDYGH 596
ER++ YS G R ER D GRS SP RE+ PDYGRG + DYG
Sbjct: 172 ERRNGYSPDGRRRDKSSERSYDKGRSL-SPYRRERGSPDYGRGSSPSAYRRERASPDYGR 230
Query: 595 GXXXXXXXXXXXXXXXRGSSPRDVITPEYDHGRSPSP---RTERVSPDDYRREASPDLKP 425
SPR DHGRS SP R ER S D R + +
Sbjct: 231 ---------------DPSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPYRS 275
Query: 424 EHQDS--PGYSGGESPIPDRYRSIM 356
E D P Y G SP P R IM
Sbjct: 276 ERSDRAIPDYGRGRSPSPGRREKIM 300
>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
Length = 478
Score = 97.4 bits (241), Expect = 5e-18
Identities = 82/205 (40%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Frame = -3
Query: 910 GRGRSSSPYHRERASPDYGRGPSASPNGRERKS-------DYGRGVSGSPNGRER-KSVY 755
GRGRS SP RE+ PDY PS SP +E+ DYGRG S S RER S Y
Sbjct: 284 GRGRSPSPGRREKIMPDYPDRPSLSPERKEKTGRSEKAIPDYGRGASPSSPRRERTNSDY 343
Query: 754 SHGGSRS--------PNGRER-KTDYGRSAG-SPNGREK-KPDYGRGXXXXXPKGREKIS 608
SRS P RER K DYG SP REK PD+GRG P+
Sbjct: 344 VRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREKANPDHGRGPSRSSPR-----R 398
Query: 607 DYGHGXXXXXXXXXXXXXXXRGSSPR--DVITPEYDHGRSPSP-RTERVSPDDYRREASP 437
+Y G SP+ + P+Y G S SP + E +SPD Y R SP
Sbjct: 399 EYDRGP---------------SQSPQQGERALPDYARGPSDSPYQRESISPD-YDRGPSP 442
Query: 436 DLKPEHQDSPGYSGGESPIPDRYRS 362
+ K E +DSP Y G SP+ RYRS
Sbjct: 443 NSKREERDSPNYGGSASPMNGRYRS 467
Score = 88.6 bits (218), Expect = 2e-15
Identities = 75/203 (36%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Frame = -3
Query: 907 RGRSSSPYHRERASPDYGRGPSASPNGRERKS-DYGRGVSGSPNGRERKSVYSHGGSRSP 731
+GRS SPY RER SPDYGRG S S RER S DYGR S SP R+R ++ HG SRSP
Sbjct: 192 KGRSLSPYRRERGSPDYGRGSSPSAYRRERASPDYGRDPSPSPRRRDR-AMPDHGRSRSP 250
Query: 730 -NGRERKTDYGRSAG---SPNGREKK----PDYGRGXXXXXPKGREKISDYGHGXXXXXX 575
+ R +T + + G SP E+ PDYGRG + + + DY
Sbjct: 251 SHHRRERTSHDSARGPSRSPYRSERSDRAIPDYGRGRSPSPGRREKIMPDY-----PDRP 305
Query: 574 XXXXXXXXXRGSSPRDVITPEYDHGRSP-SPRTERVSPDDYRREASPDLKPEHQDSPGYS 398
G S + + P+Y G SP SPR ER + DY R S SP
Sbjct: 306 SLSPERKEKTGRSEKAI--PDYGRGASPSSPRRERTN-SDYVRANSRSRSRSQSQSPRQR 362
Query: 397 GGESPIPDRYRSIM--NKEKVGP 335
P RS+ +EK P
Sbjct: 363 ERTKPDYGHERSVSPEQREKANP 385
Score = 65.1 bits (157), Expect = 3e-08
Identities = 46/109 (42%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = -3
Query: 913 RGRGRSSSPYHRERASPDYGRGPSASPNGRERKS-DYGRGVSGSPNGRERKSVYSHGGSR 737
R R +S SP RER PDYG S SP RE+ + D+GRG S S RE Y G S+
Sbjct: 351 RSRSQSQSPRQRERTKPDYGHERSVSPEQREKANPDHGRGPSRSSPRRE----YDRGPSQ 406
Query: 736 SPNGRERK-TDYGRS-AGSPNGREK-KPDYGRGXXXXXPKGREKISDYG 599
SP ER DY R + SP RE PDY RG + +YG
Sbjct: 407 SPQQGERALPDYARGPSDSPYQRESISPDYDRGPSPNSKREERDSPNYG 455
Score = 62.0 bits (149), Expect = 2e-07
Identities = 52/145 (35%), Positives = 58/145 (40%), Gaps = 6/145 (4%)
Frame = -3
Query: 772 ERKSVYSHGGSRSPNGRERKTDYGRSAGSPNGREK-KPDYGRGXXXXXPKGREKISDYGH 596
ER++ YS G R ER D GRS SP RE+ PDYGRG + DYG
Sbjct: 170 ERRNGYSPDGRRRDKSSERSYDKGRSL-SPYRRERGSPDYGRGSSPSAYRRERASPDYGR 228
Query: 595 GXXXXXXXXXXXXXXXRGSSPRDVITPEYDHGRSPSP---RTERVSPDDYRREASPDLKP 425
SPR DHGRS SP R ER S D R + +
Sbjct: 229 ---------------DPSPSPRRRDRAMPDHGRSRSPSHHRRERTSHDSARGPSRSPYRS 273
Query: 424 EHQDS--PGYSGGESPIPDRYRSIM 356
E D P Y G SP P R IM
Sbjct: 274 ERSDRAIPDYGRGRSPSPGRREKIM 298
>gb|ABI34327.1| Arginine/serine-rich splicing factor RSP41, putative [Solanum
demissum]
Length = 373
Score = 89.7 bits (221), Expect = 1e-15
Identities = 66/187 (35%), Positives = 85/187 (45%)
Frame = -3
Query: 919 YGRGRGRSSSPYHRERASPDYGRGPSASPNGRERKSDYGRGVSGSPNGRERKSVYSHGGS 740
YGRGR RS SP + R+SPDYGR PS++PN RER S+YG G SPN R+ ++ HG
Sbjct: 228 YGRGRARSPSPIRQGRSSPDYGRRPSSNPNHRERDSEYGSG--RSPNIRKERNP-DHGNG 284
Query: 739 RSPNGRERKTDYGRSAGSPNGREKKPDYGRGXXXXXPKGREKISDYGHGXXXXXXXXXXX 560
SPN R + AGS NG P E + + G
Sbjct: 285 HSPNPRRLR------AGSENGEVHSPP------------EEGLLESGPSPPRV------- 319
Query: 559 XXXXRGSSPRDVITPEYDHGRSPSPRTERVSPDDYRREASPDLKPEHQDSPGYSGGESPI 380
R +P+ GRS SPR+ KPE SP Y+ ESP+
Sbjct: 320 -------GRRGKYSPDDYRGRSRSPRS----------------KPEEIGSPRYAAAESPL 356
Query: 379 PDRYRSI 359
P+R+RS+
Sbjct: 357 PERHRSL 363