BLASTX nr result

ID: Panax21_contig00003579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003579
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300606.1| predicted protein [Populus trichocarpa] gi|2...   135   1e-29
ref|XP_002510763.1| conserved hypothetical protein [Ricinus comm...   132   1e-28
emb|CBI40806.3| unnamed protein product [Vitis vinifera]              130   3e-28
ref|XP_002274237.1| PREDICTED: uncharacterized protein LOC100246...   130   3e-28
ref|XP_003636025.1| Photosystem II CP47 chlorophyll apoprotein [...   122   1e-25

>ref|XP_002300606.1| predicted protein [Populus trichocarpa] gi|222842332|gb|EEE79879.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  135 bits (340), Expect = 1e-29
 Identities = 76/129 (58%), Positives = 93/129 (72%)
 Frame = +1

Query: 19  RVSELEA*KKVAASVRNFKEAARIAVKAKALYVEKEGLQIKMESALSEFGKLDEEISDTV 198
           RV ELEA KKVAA+VRNFKEAARIA +AK+L VEK+ L+I ++ A SE  KL+E+I DTV
Sbjct: 569 RVPELEAEKKVAAAVRNFKEAARIAAEAKSLGVEKDSLEIGLQKATSELKKLEEDIKDTV 628

Query: 199 NRLQDIEVQVLSKEKELAMTRFQMLLLIXXXXXXXXXXXLKLDDLKEADILLGEAKVAES 378
           +RLQ  E  +LSKEKE+AM RFQ LLLI           L+  D KEA++LL EA+ A  
Sbjct: 629 DRLQTTEGLILSKEKEVAMARFQRLLLISGAATAERFAALERGDTKEANLLLAEAEAAND 688

Query: 379 EARKLQSTY 405
           EA+KLQ TY
Sbjct: 689 EAKKLQPTY 697


>ref|XP_002510763.1| conserved hypothetical protein [Ricinus communis]
           gi|223551464|gb|EEF52950.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 742

 Score =  132 bits (331), Expect = 1e-28
 Identities = 74/132 (56%), Positives = 93/132 (70%)
 Frame = +1

Query: 19  RVSELEA*KKVAASVRNFKEAARIAVKAKALYVEKEGLQIKMESALSEFGKLDEEISDTV 198
           RV ELEA KKVAA+ RNFKEAARIA +AK+L VEK+G+QI +E A  E  KL+++I  TV
Sbjct: 573 RVPELEAEKKVAAAARNFKEAARIAAEAKSLSVEKDGVQIDLEKATLELEKLEKDIKSTV 632

Query: 199 NRLQDIEVQVLSKEKELAMTRFQMLLLIXXXXXXXXXXXLKLDDLKEADILLGEAKVAES 378
           +RLQD E  + SKEKE+AM RFQ LLLI           L+L D +EA++LL EA+ A +
Sbjct: 633 SRLQDTEQLISSKEKEVAMARFQSLLLIAGAATAERFAALELGDTEEANLLLAEAEAANA 692

Query: 379 EARKLQSTYIAN 414
           EA+KLQ  Y  N
Sbjct: 693 EAKKLQPIYNFN 704


>emb|CBI40806.3| unnamed protein product [Vitis vinifera]
          Length = 752

 Score =  130 bits (328), Expect = 3e-28
 Identities = 70/128 (54%), Positives = 92/128 (71%)
 Frame = +1

Query: 22  VSELEA*KKVAASVRNFKEAARIAVKAKALYVEKEGLQIKMESALSEFGKLDEEISDTVN 201
           V ELEA KKVAA+ RNFKEAAR+A +AK L VEKEG ++KM+ A+ E GKL+EEI DTVN
Sbjct: 555 VPELEAEKKVAAAARNFKEAARVAAEAKKLSVEKEGEEVKMDGAMLELGKLEEEIKDTVN 614

Query: 202 RLQDIEVQVLSKEKELAMTRFQMLLLIXXXXXXXXXXXLKLDDLKEADILLGEAKVAESE 381
            L + +  +L KEKE+AM RFQ LLL+           ++L DL+EA++LL EA+ AE E
Sbjct: 615 WLVEADELILFKEKEVAMARFQRLLLVAGAAKAERLAAVELGDLEEANLLLAEAEAAEVE 674

Query: 382 ARKLQSTY 405
           A+ L+ +Y
Sbjct: 675 AKNLEQSY 682


>ref|XP_002274237.1| PREDICTED: uncharacterized protein LOC100246165 [Vitis vinifera]
          Length = 753

 Score =  130 bits (328), Expect = 3e-28
 Identities = 70/128 (54%), Positives = 92/128 (71%)
 Frame = +1

Query: 22  VSELEA*KKVAASVRNFKEAARIAVKAKALYVEKEGLQIKMESALSEFGKLDEEISDTVN 201
           V ELEA KKVAA+ RNFKEAAR+A +AK L VEKEG ++KM+ A+ E GKL+EEI DTVN
Sbjct: 586 VPELEAEKKVAAAARNFKEAARVAAEAKKLSVEKEGEEVKMDGAMLELGKLEEEIKDTVN 645

Query: 202 RLQDIEVQVLSKEKELAMTRFQMLLLIXXXXXXXXXXXLKLDDLKEADILLGEAKVAESE 381
            L + +  +L KEKE+AM RFQ LLL+           ++L DL+EA++LL EA+ AE E
Sbjct: 646 WLVEADELILFKEKEVAMARFQRLLLVAGAAKAERLAAVELGDLEEANLLLAEAEAAEVE 705

Query: 382 ARKLQSTY 405
           A+ L+ +Y
Sbjct: 706 AKNLEQSY 713


>ref|XP_003636025.1| Photosystem II CP47 chlorophyll apoprotein [Medicago truncatula]
           gi|355501960|gb|AES83163.1| Photosystem II CP47
           chlorophyll apoprotein [Medicago truncatula]
          Length = 779

 Score =  122 bits (306), Expect = 1e-25
 Identities = 66/129 (51%), Positives = 91/129 (70%)
 Frame = +1

Query: 19  RVSELEA*KKVAASVRNFKEAARIAVKAKALYVEKEGLQIKMESALSEFGKLDEEISDTV 198
           RV ELEA KKVA + RNFKEAARIA +AK+L VEKE +Q+ M++A S   KL+EEI  T+
Sbjct: 558 RVPELEAEKKVATAARNFKEAARIASEAKSLCVEKENIQMGMDTATSNLQKLEEEIKGTL 617

Query: 199 NRLQDIEVQVLSKEKELAMTRFQMLLLIXXXXXXXXXXXLKLDDLKEADILLGEAKVAES 378
           ++LQ+ E  +L KEKELAM R+Q LLL             ++ D++EA++LL EA+ A+ 
Sbjct: 618 DKLQETEGMILLKEKELAMARYQKLLLTAATARAEKAAAQEMGDVEEANLLLAEAEAADC 677

Query: 379 EARKLQSTY 405
           EA +++STY
Sbjct: 678 EAERIRSTY 686


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