BLASTX nr result

ID: Panax21_contig00003567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003567
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing fac...   175   9e-42
ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing fac...   170   3e-40
ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing fac...   170   3e-40
ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycin...   170   3e-40
ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-40

>ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
           [Vitis vinifera] gi|296083786|emb|CBI24003.3| unnamed
           protein product [Vitis vinifera]
          Length = 181

 Score =  175 bits (444), Expect = 9e-42
 Identities = 86/113 (76%), Positives = 91/113 (80%)
 Frame = -1

Query: 584 MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARKPPGYAFIDFDDRRDAQDAIREIDG 405
           MSRVYVGNLDPRV+ERELEDEFRV+GVIRSVWVAR+PPGYAFIDFDDRRDAQDAIRE+DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60

Query: 404 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXSDLKCYECGEPGHFARECRL 246
           +NGWRVELSHN                      SDLKCYECGEPGHFARECRL
Sbjct: 61  KNGWRVELSHN----SRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 109


>ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
           sativus] gi|449515555|ref|XP_004164814.1| PREDICTED:
           serine/arginine-rich splicing factor RSZ22-like [Cucumis
           sativus]
          Length = 192

 Score =  170 bits (431), Expect = 3e-40
 Identities = 84/113 (74%), Positives = 89/113 (78%)
 Frame = -1

Query: 584 MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARKPPGYAFIDFDDRRDAQDAIREIDG 405
           MSRVYVGNLDPRVSERELEDEFRV+GVIRSVWVAR+PPGYAFIDFDD RDA+DAI E+DG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 404 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXSDLKCYECGEPGHFARECRL 246
           +NGWRVELSHN                      SDLKCYECGEPGHFARECRL
Sbjct: 61  KNGWRVELSHN----SRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRL 109


>ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
           max]
          Length = 178

 Score =  170 bits (431), Expect = 3e-40
 Identities = 83/113 (73%), Positives = 90/113 (79%)
 Frame = -1

Query: 584 MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARKPPGYAFIDFDDRRDAQDAIREIDG 405
           MSRVYVGNLD RV+ER+LEDEFRV+GVIRSVWVAR+PPGYAFIDFDDRRDAQDAIRE+DG
Sbjct: 1   MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60

Query: 404 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXSDLKCYECGEPGHFARECRL 246
           +NGWRVELSHN                      SDLKCYECGEPGHFARECR+
Sbjct: 61  KNGWRVELSHN--------SRGGGGGRGGRSGGSDLKCYECGEPGHFARECRM 105


>ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycine max]
           gi|255625755|gb|ACU13222.1| unknown [Glycine max]
           gi|255635722|gb|ACU18210.1| unknown [Glycine max]
          Length = 178

 Score =  170 bits (431), Expect = 3e-40
 Identities = 83/113 (73%), Positives = 90/113 (79%)
 Frame = -1

Query: 584 MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARKPPGYAFIDFDDRRDAQDAIREIDG 405
           MSRVYVGNLD RV+ER+LEDEFRV+GVIRSVWVAR+PPGYAFIDFDDRRDAQDAIRE+DG
Sbjct: 1   MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60

Query: 404 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXSDLKCYECGEPGHFARECRL 246
           +NGWRVELSHN                      SDLKCYECGEPGHFARECR+
Sbjct: 61  KNGWRVELSHN--------SRGGGGGRGGRSGGSDLKCYECGEPGHFARECRM 105


>ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|222872591|gb|EEF09722.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  169 bits (429), Expect = 5e-40
 Identities = 83/113 (73%), Positives = 89/113 (78%)
 Frame = -1

Query: 584 MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARKPPGYAFIDFDDRRDAQDAIREIDG 405
           MSRVYVGNLDPRVSER+LEDEFR +GVIRSVWVAR+PPGYAFIDFDD+RDAQDAI E+DG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60

Query: 404 RNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXSDLKCYECGEPGHFARECRL 246
           +NGWRVELSHN                      SDLKCYECGEPGHFARECRL
Sbjct: 61  KNGWRVELSHN-SRGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 112


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