BLASTX nr result

ID: Panax21_contig00003561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003561
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324081.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_002278873.2| PREDICTED: lamin-like protein [Vitis vinifera]    118   8e-25
ref|XP_002532908.1| Early nodulin 55-2 precursor, putative [Rici...   118   8e-25
emb|CBI22266.3| unnamed protein product [Vitis vinifera]              118   8e-25
ref|XP_003543863.1| PREDICTED: lamin-like protein-like [Glycine ...   113   3e-23

>ref|XP_002324081.1| predicted protein [Populus trichocarpa] gi|222867083|gb|EEF04214.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/94 (62%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
 Frame = -1

Query: 563 FGFDKHRYNVVEVNRTRYEQCIDRDFIKNITRGGRDVFNLTEAKPFYFLSSGGYCFHGMK 384
           F FDKH YNV+EVN T YE C D+ FIKNITRGGRDV  LTEA+ +YFLSSGGYC++GMK
Sbjct: 68  FVFDKHSYNVLEVNETSYENCNDQGFIKNITRGGRDVVQLTEARRYYFLSSGGYCWNGMK 127

Query: 383 LAVNVVEFVPSPEPAPA-KNGSPADIGSRIILVV 285
           +A+NV +F P+P PA + +NGSP++I SR ++++
Sbjct: 128 VAINVEDFAPTPAPASSTENGSPSNIVSRQMIIL 161


>ref|XP_002278873.2| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 164

 Score =  118 bits (295), Expect = 8e-25
 Identities = 52/87 (59%), Positives = 68/87 (78%)
 Frame = -1

Query: 563 FGFDKHRYNVVEVNRTRYEQCIDRDFIKNITRGGRDVFNLTEAKPFYFLSSGGYCFHGMK 384
           F FDKH + V EVN T YE+C +++FI NIT+GGRDVFNLT  +P+YFLSSGGYC+HGMK
Sbjct: 57  FIFDKHYFTVFEVNETNYERCSEQEFITNITKGGRDVFNLTHPRPYYFLSSGGYCWHGMK 116

Query: 383 LAVNVVEFVPSPEPAPAKNGSPADIGS 303
           LA+NV   +P+P P+P+K+ +P    S
Sbjct: 117 LAINVTH-MPAPAPSPSKSNAPPSASS 142


>ref|XP_002532908.1| Early nodulin 55-2 precursor, putative [Ricinus communis]
           gi|223527342|gb|EEF29488.1| Early nodulin 55-2
           precursor, putative [Ricinus communis]
          Length = 168

 Score =  118 bits (295), Expect = 8e-25
 Identities = 54/84 (64%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
 Frame = -1

Query: 563 FGFDKHRYNVVEVNRTRYEQCIDRDFIKNITRGGRDVFNLTEAKPFYFLSSGGYCFHGMK 384
           F FDKH +NV+EVN+T YE C D+ FI N+TRGGRDV+ L EA+P+YFLSSGGYC++GMK
Sbjct: 59  FVFDKHYFNVLEVNQTSYEDCNDQGFIFNVTRGGRDVYQLKEARPYYFLSSGGYCWNGMK 118

Query: 383 LAVNVVEFVPSPEPA-PAKNGSPA 315
           LA++V E  P+P PA PAK+ SP+
Sbjct: 119 LAISVEELAPTPAPAPPAKSDSPS 142


>emb|CBI22266.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score =  118 bits (295), Expect = 8e-25
 Identities = 52/87 (59%), Positives = 68/87 (78%)
 Frame = -1

Query: 563 FGFDKHRYNVVEVNRTRYEQCIDRDFIKNITRGGRDVFNLTEAKPFYFLSSGGYCFHGMK 384
           F FDKH + V EVN T YE+C +++FI NIT+GGRDVFNLT  +P+YFLSSGGYC+HGMK
Sbjct: 69  FIFDKHYFTVFEVNETNYERCSEQEFITNITKGGRDVFNLTHPRPYYFLSSGGYCWHGMK 128

Query: 383 LAVNVVEFVPSPEPAPAKNGSPADIGS 303
           LA+NV   +P+P P+P+K+ +P    S
Sbjct: 129 LAINVTH-MPAPAPSPSKSNAPPSASS 154


>ref|XP_003543863.1| PREDICTED: lamin-like protein-like [Glycine max]
          Length = 175

 Score =  113 bits (282), Expect = 3e-23
 Identities = 52/87 (59%), Positives = 66/87 (75%), Gaps = 6/87 (6%)
 Frame = -1

Query: 563 FGFDKHRYNVVEVNRTRYEQCIDRDFIKNITRGGRDVFNLTEAKPFYFLSSGGYCFHGMK 384
           F FD+  +NV+EVN+T YE CIDRDFIKNITRGGRDV  +TEA+ +Y+LS GGYCFHGMK
Sbjct: 64  FKFDRRYFNVLEVNKTSYENCIDRDFIKNITRGGRDVVQMTEARTYYYLSDGGYCFHGMK 123

Query: 383 LAVNVVEF------VPSPEPAPAKNGS 321
           +AV V E+      + +P P+P  +GS
Sbjct: 124 VAVQVQEYQDPALAMVAPAPSPVVSGS 150


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