BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003554
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307657.1| predicted protein [Populus trichocarpa] gi|2...    45   5e-07
ref|XP_002300769.1| predicted protein [Populus trichocarpa] gi|1...    45   1e-06
ref|XP_002529842.1| Charged multivesicular body protein 2a, puta...    45   1e-06
gb|AAD10675.1| Similar to human BC-2 protein [Arabidopsis thaliana]    47   2e-06
ref|NP_563696.1| vacuolar protein sorting-associated protein 2.3...    47   2e-06

>ref|XP_002307657.1| predicted protein [Populus trichocarpa] gi|222857106|gb|EEE94653.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 45.4 bits (106), Expect(2) = 5e-07
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -1

Query: 440 EIGVDVASQLSTAPKGKIAGKKAEDA 363
           EIGVDVASQLS APKGKI GK  EDA
Sbjct: 169 EIGVDVASQLSVAPKGKITGKNREDA 194



 Score = 33.1 bits (74), Expect(2) = 5e-07
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = -2

Query: 322 NSGMDELEKRLAALRNP 272
           +SG+DELEKRLAA+RNP
Sbjct: 196 SSGIDELEKRLAAMRNP 212


>ref|XP_002300769.1| predicted protein [Populus trichocarpa] gi|118489303|gb|ABK96456.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222842495|gb|EEE80042.1| predicted protein [Populus
           trichocarpa]
          Length = 212

 Score = 45.1 bits (105), Expect(2) = 1e-06
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = -1

Query: 440 EIGVDVASQLSTAPKGKIAGKKAEDA 363
           EIGVDVASQLS APKGKIAGK  E+A
Sbjct: 169 EIGVDVASQLSAAPKGKIAGKNRENA 194



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -2

Query: 322 NSGMDELEKRLAALRNP 272
           +SG+DELEKRLA LRNP
Sbjct: 196 SSGIDELEKRLATLRNP 212


>ref|XP_002529842.1| Charged multivesicular body protein 2a, putative [Ricinus communis]
           gi|223530670|gb|EEF32543.1| Charged multivesicular body
           protein 2a, putative [Ricinus communis]
          Length = 212

 Score = 44.7 bits (104), Expect(2) = 1e-06
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -1

Query: 440 EIGVDVASQLSTAPKGKIAGKKAE 369
           EIGVD+ASQLSTAPKGKIAGK  E
Sbjct: 169 EIGVDIASQLSTAPKGKIAGKNKE 192



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = -2

Query: 322 NSGMDELEKRLAALRNP 272
           +SG+DELE+RLAALRNP
Sbjct: 196 SSGIDELEQRLAALRNP 212


>gb|AAD10675.1| Similar to human BC-2 protein [Arabidopsis thaliana]
          Length = 213

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = -1

Query: 440 EIGVDVASQLSTAPKGKIAGKKAED 366
           EIG+D+ASQLS+APKGKI GKKAED
Sbjct: 172 EIGIDIASQLSSAPKGKIGGKKAED 196



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = -2

Query: 322 NSGMDELEKRLAALR 278
           +SG+DELEKRLAALR
Sbjct: 199 SSGIDELEKRLAALR 213


>ref|NP_563696.1| vacuolar protein sorting-associated protein 2.3 [Arabidopsis
           thaliana] gi|75249519|sp|Q941D5.1|VPS2C_ARATH RecName:
           Full=Vacuolar protein sorting-associated protein 2
           homolog 3; Short=AtVPS2-3; AltName: Full=Charged
           multivesicular body protein 2 homolog 3; AltName:
           Full=ESCRT-III complex subunit VPS2 homolog 3
           gi|15529228|gb|AAK97708.1| At1g03950/F21M11_12
           [Arabidopsis thaliana] gi|16974377|gb|AAL31114.1|
           At1g03950/F21M11_12 [Arabidopsis thaliana]
           gi|332189516|gb|AEE27637.1| vacuolar protein
           sorting-associated protein 2.3 [Arabidopsis thaliana]
          Length = 210

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = -1

Query: 440 EIGVDVASQLSTAPKGKIAGKKAED 366
           EIG+D+ASQLS+APKGKI GKKAED
Sbjct: 169 EIGIDIASQLSSAPKGKIGGKKAED 193



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = -2

Query: 322 NSGMDELEKRLAALR 278
           +SG+DELEKRLAALR
Sbjct: 196 SSGIDELEKRLAALR 210