BLASTX nr result

ID: Panax21_contig00003553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003553
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237321.1| uncharacterized protein LOC100306343 [Glycin...   322   8e-86
ref|NP_001237459.1| uncharacterized protein LOC100499888 [Glycin...   321   2e-85
ref|NP_563696.1| vacuolar protein sorting-associated protein 2.3...   319   9e-85
ref|XP_004150360.1| PREDICTED: vacuolar protein sorting-associat...   318   2e-84
ref|XP_002276413.1| PREDICTED: vacuolar protein sorting-associat...   318   2e-84

>ref|NP_001237321.1| uncharacterized protein LOC100306343 [Glycine max]
           gi|255628255|gb|ACU14472.1| unknown [Glycine max]
          Length = 212

 Score =  322 bits (826), Expect = 8e-86
 Identities = 170/212 (80%), Positives = 189/212 (89%)
 Frame = -3

Query: 877 MNIFTKKPSAKEVLRESKREMTNATRGIEKEITALQSEEKKLVAEIKKTAKSGNEAATKI 698
           MNIFTKKP+AKE LR+SKR+MTNATRGIEKEI ALQ EEKKLVAEIK+TAK+GNEAATKI
Sbjct: 1   MNIFTKKPTAKEALRDSKRQMTNATRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKI 60

Query: 697 LARQLVRLRQQIANLQGSRAQMRGIATHTQAMSAHTSVAVGMKGASKAMSAMNKQMDPAK 518
           LARQL+RLRQQIANLQGSRAQMRGIATHTQAM AH+SVAVG+KGA+KAM AMNKQM+PAK
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGLKGATKAMVAMNKQMEPAK 120

Query: 517 QAKVIREFQKQSAQMDMTTEMMSEAIDDSXXXXXXXXXXXXXXNQVLDEIGVDVASQLST 338
           QAK+I++FQKQSAQMDMTTEMMS+AIDD+              NQVLDEIGVDVASQLS 
Sbjct: 121 QAKIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAKEETEELTNQVLDEIGVDVASQLSA 180

Query: 337 APKGKIAGKKAEDASSSGMDELEKRLAALRNP 242
           APKG++A K AE+ SSSG+DELEKRLAALRNP
Sbjct: 181 APKGRVATKNAENVSSSGIDELEKRLAALRNP 212


>ref|NP_001237459.1| uncharacterized protein LOC100499888 [Glycine max]
           gi|255627453|gb|ACU14071.1| unknown [Glycine max]
          Length = 212

 Score =  321 bits (822), Expect = 2e-85
 Identities = 169/212 (79%), Positives = 191/212 (90%)
 Frame = -3

Query: 877 MNIFTKKPSAKEVLRESKREMTNATRGIEKEITALQSEEKKLVAEIKKTAKSGNEAATKI 698
           MNIFTKKP+AKE LRESKREMTNA+RGIEKEI ALQSEEKKLVAEIK+TAK+GNEAATKI
Sbjct: 1   MNIFTKKPTAKEALRESKREMTNASRGIEKEIGALQSEEKKLVAEIKRTAKTGNEAATKI 60

Query: 697 LARQLVRLRQQIANLQGSRAQMRGIATHTQAMSAHTSVAVGMKGASKAMSAMNKQMDPAK 518
           LARQL+RLRQQIANLQGSRAQMRGIATHTQAM AH+SVAVG+KGA+KAM+AMNK+M+PAK
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGLKGATKAMAAMNKKMEPAK 120

Query: 517 QAKVIREFQKQSAQMDMTTEMMSEAIDDSXXXXXXXXXXXXXXNQVLDEIGVDVASQLST 338
           QAK+I++FQKQSAQMDMTTEMMS+AIDD+              NQVLDEIGVDVASQLS 
Sbjct: 121 QAKIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDVASQLSA 180

Query: 337 APKGKIAGKKAEDASSSGMDELEKRLAALRNP 242
           APKG++A K AE+ SSSG++ELEKRLAALR+P
Sbjct: 181 APKGRVATKNAENDSSSGIEELEKRLAALRDP 212


>ref|NP_563696.1| vacuolar protein sorting-associated protein 2.3 [Arabidopsis
           thaliana] gi|75249519|sp|Q941D5.1|VPS2C_ARATH RecName:
           Full=Vacuolar protein sorting-associated protein 2
           homolog 3; Short=AtVPS2-3; AltName: Full=Charged
           multivesicular body protein 2 homolog 3; AltName:
           Full=ESCRT-III complex subunit VPS2 homolog 3
           gi|15529228|gb|AAK97708.1| At1g03950/F21M11_12
           [Arabidopsis thaliana] gi|16974377|gb|AAL31114.1|
           At1g03950/F21M11_12 [Arabidopsis thaliana]
           gi|332189516|gb|AEE27637.1| vacuolar protein
           sorting-associated protein 2.3 [Arabidopsis thaliana]
          Length = 210

 Score =  319 bits (817), Expect = 9e-85
 Identities = 168/210 (80%), Positives = 185/210 (88%)
 Frame = -3

Query: 877 MNIFTKKPSAKEVLRESKREMTNATRGIEKEITALQSEEKKLVAEIKKTAKSGNEAATKI 698
           MNIFTKKP+ +EVLRESKREMT ATRGIEKEI +LQSEEKKLV EIK+TAKSGNE ATKI
Sbjct: 1   MNIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKI 60

Query: 697 LARQLVRLRQQIANLQGSRAQMRGIATHTQAMSAHTSVAVGMKGASKAMSAMNKQMDPAK 518
           LARQL+RLRQQIANLQGSRAQMRGIATHTQAM AHTSVA GM+GA+KAM+AM+K MDPAK
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAK 120

Query: 517 QAKVIREFQKQSAQMDMTTEMMSEAIDDSXXXXXXXXXXXXXXNQVLDEIGVDVASQLST 338
           QAKV+REFQKQSAQMDMTTEMMS++IDD+              NQVLDEIG+D+ASQLS+
Sbjct: 121 QAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSS 180

Query: 337 APKGKIAGKKAEDASSSGMDELEKRLAALR 248
           APKGKI GKKAED  SSG+DELEKRLAALR
Sbjct: 181 APKGKIGGKKAEDVGSSGIDELEKRLAALR 210


>ref|XP_004150360.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           3-like [Cucumis sativus]
           gi|449513010|ref|XP_004164203.1| PREDICTED: vacuolar
           protein sorting-associated protein 2 homolog 3-like
           [Cucumis sativus]
          Length = 212

 Score =  318 bits (815), Expect = 2e-84
 Identities = 172/212 (81%), Positives = 183/212 (86%)
 Frame = -3

Query: 877 MNIFTKKPSAKEVLRESKREMTNATRGIEKEITALQSEEKKLVAEIKKTAKSGNEAATKI 698
           MNIF+KKP+AKE LRESKREMT +TRGIEKEI ALQ EEKKLVAEIK+TAK+GNEAATKI
Sbjct: 1   MNIFSKKPTAKEALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKI 60

Query: 697 LARQLVRLRQQIANLQGSRAQMRGIATHTQAMSAHTSVAVGMKGASKAMSAMNKQMDPAK 518
           LARQLVRLRQQIANLQGSRAQMRGIATHTQAM A TSVA GMK ASKAMSAMNKQM+P K
Sbjct: 61  LARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNKQMNPVK 120

Query: 517 QAKVIREFQKQSAQMDMTTEMMSEAIDDSXXXXXXXXXXXXXXNQVLDEIGVDVASQLST 338
           QAKVIREFQKQSAQMDMTTEM+S+AIDD+              NQVLDEIGVDVASQLST
Sbjct: 121 QAKVIREFQKQSAQMDMTTEMISDAIDDALDDDEAEEETEDLTNQVLDEIGVDVASQLST 180

Query: 337 APKGKIAGKKAEDASSSGMDELEKRLAALRNP 242
           APKG+IA K  E   SSG+DELEKRLAALRNP
Sbjct: 181 APKGRIASKNTEGVGSSGIDELEKRLAALRNP 212


>ref|XP_002276413.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog 3
           [Vitis vinifera] gi|297744171|emb|CBI37141.3| unnamed
           protein product [Vitis vinifera]
          Length = 212

 Score =  318 bits (814), Expect = 2e-84
 Identities = 172/211 (81%), Positives = 185/211 (87%)
 Frame = -3

Query: 877 MNIFTKKPSAKEVLRESKREMTNATRGIEKEITALQSEEKKLVAEIKKTAKSGNEAATKI 698
           MNIF+KKP+AKE LRESKREM NATRGIEKEI +LQ EEKKLVAEIK+TAK+GNEAATKI
Sbjct: 1   MNIFSKKPTAKEALRESKREMNNATRGIEKEIGSLQLEEKKLVAEIKRTAKTGNEAATKI 60

Query: 697 LARQLVRLRQQIANLQGSRAQMRGIATHTQAMSAHTSVAVGMKGASKAMSAMNKQMDPAK 518
           LARQLVRLRQQIANLQGSRAQMRGIATHTQAM A+TSV+VGMKGASKAM+AMNKQM PAK
Sbjct: 61  LARQLVRLRQQIANLQGSRAQMRGIATHTQAMHANTSVSVGMKGASKAMAAMNKQMAPAK 120

Query: 517 QAKVIREFQKQSAQMDMTTEMMSEAIDDSXXXXXXXXXXXXXXNQVLDEIGVDVASQLST 338
           QAKVI+EFQ+QSAQMDMTTEMMS+AIDD+              NQVLDEIGVDVASQLS 
Sbjct: 121 QAKVIQEFQRQSAQMDMTTEMMSDAIDDALDNDEAEEETEDLTNQVLDEIGVDVASQLSA 180

Query: 337 APKGKIAGKKAEDASSSGMDELEKRLAALRN 245
           APKGKIA KK ED  SSG+ ELEKRLAALRN
Sbjct: 181 APKGKIARKKTEDVGSSGISELEKRLAALRN 211


Top