BLASTX nr result

ID: Panax21_contig00003545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003545
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267865.2| PREDICTED: glutamate synthase 1 [NADH], chlo...   116   5e-24
ref|XP_002513554.1| glutamate synthase, putative [Ricinus commun...   110   3e-22
ref|XP_002321436.1| predicted protein [Populus trichocarpa] gi|2...   109   6e-22
sp|Q03460.1|GLSN_MEDSA RecName: Full=Glutamate synthase [NADH], ...   100   6e-19
gb|AAB41904.1| NADH-dependent glutamate synthase [Medicago sativa]     99   1e-18

>ref|XP_002267865.2| PREDICTED: glutamate synthase 1 [NADH], chloroplastic-like [Vitis
           vinifera] gi|302144040|emb|CBI23145.3| unnamed protein
           product [Vitis vinifera]
          Length = 2216

 Score =  116 bits (291), Expect = 5e-24
 Identities = 70/122 (57%), Positives = 86/122 (70%), Gaps = 7/122 (5%)
 Frame = -2

Query: 346 SNSVIQAGKNSCSSSLVLPSVTKLKPLLNPQLNV--LSGVGVKAK-----IKTKTSCCVL 188
           S SV+Q   NS S   ++PS  + +P    Q NV  LS    K+K     +  +T+  V+
Sbjct: 7   SGSVVQIRNNSGSG--LVPS--RKRPTFAHQFNVTPLSRFNNKSKGSSCYVSKRTN--VV 60

Query: 187 ENRFYGTRLRGGSGSERHHIWQSDGPGRAPKLKVVVRSSMSQVPEKPLGLYDPSFEKDSC 8
           EN+F GTRLRG  GSER H WQSDGPGR+PKL+VVVRS++SQVPEKPLGLYDPSF+KDSC
Sbjct: 61  ENKFLGTRLRG-CGSERLHFWQSDGPGRSPKLRVVVRSALSQVPEKPLGLYDPSFDKDSC 119

Query: 7   GV 2
           GV
Sbjct: 120 GV 121


>ref|XP_002513554.1| glutamate synthase, putative [Ricinus communis]
           gi|223547462|gb|EEF48957.1| glutamate synthase, putative
           [Ricinus communis]
          Length = 2215

 Score =  110 bits (275), Expect = 3e-22
 Identities = 59/115 (51%), Positives = 81/115 (70%), Gaps = 10/115 (8%)
 Frame = -2

Query: 316 SCSSSLVLP------SVTKLKPLLNPQLNVLSGVGVKAKIKTKTSC----CVLENRFYGT 167
           S SSSL+ P      ++TK    ++P+LNV++ +  +    T+ S      VL+ + +GT
Sbjct: 5   SSSSSLLQPRRGANLNITKQPCSISPKLNVIAPISRRTSRPTRCSVTKKSAVLDKKIFGT 64

Query: 166 RLRGGSGSERHHIWQSDGPGRAPKLKVVVRSSMSQVPEKPLGLYDPSFEKDSCGV 2
           RLR  +G+ER H WQSDGPG +PKL+V+VRS++S VPEKPLGLYDPSF+KDSCGV
Sbjct: 65  RLRA-AGTERLHFWQSDGPGCSPKLRVMVRSALSGVPEKPLGLYDPSFDKDSCGV 118


>ref|XP_002321436.1| predicted protein [Populus trichocarpa] gi|222868432|gb|EEF05563.1|
           predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  109 bits (273), Expect = 6e-22
 Identities = 54/95 (56%), Positives = 66/95 (69%), Gaps = 7/95 (7%)
 Frame = -2

Query: 265 LNPQLNVLSGVGVKAK-------IKTKTSCCVLENRFYGTRLRGGSGSERHHIWQSDGPG 107
           L+P LNV +   V  +         T+ S  V    F G+++RG +GSER H WQSDGPG
Sbjct: 29  LSPSLNVATAASVSRRSARANRCASTRKSVVVERKSFLGSKVRGSAGSERLHFWQSDGPG 88

Query: 106 RAPKLKVVVRSSMSQVPEKPLGLYDPSFEKDSCGV 2
           R PKL+VVVRS++S VPEKPLGLYDPSF+KDSCGV
Sbjct: 89  REPKLRVVVRSALSGVPEKPLGLYDPSFDKDSCGV 123


>sp|Q03460.1|GLSN_MEDSA RecName: Full=Glutamate synthase [NADH], amyloplastic; AltName:
           Full=NADH-GOGAT; Flags: Precursor
           gi|166412|gb|AAB46617.1| NADH-glutamate synthase
           [Medicago sativa]
          Length = 2194

 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 47/93 (50%), Positives = 64/93 (68%), Gaps = 4/93 (4%)
 Frame = -2

Query: 268 LLNPQLNVLSGVGVK----AKIKTKTSCCVLENRFYGTRLRGGSGSERHHIWQSDGPGRA 101
           L NPQ+N +S    +    A++   ++ CV   R+ GT+LR G G ER  +W+S G GR 
Sbjct: 12  LNNPQINAISNPNARLRPLARVTRCSATCVERKRWLGTKLRSGGGLERIQLWESGGLGRL 71

Query: 100 PKLKVVVRSSMSQVPEKPLGLYDPSFEKDSCGV 2
           PKL+V V+SS S VP+KP+GLYDP+F+KDSCGV
Sbjct: 72  PKLRVAVKSSFSAVPDKPMGLYDPAFDKDSCGV 104


>gb|AAB41904.1| NADH-dependent glutamate synthase [Medicago sativa]
          Length = 2194

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
 Frame = -2

Query: 268 LLNPQLNVLSGVGVK----AKIKTKTSCCVLENRFYGTRLRGGSGSERHHIWQSDGPGRA 101
           L NPQ+N +S    +    A+    ++ CV   R+ GT+LR G G ER  +W+S G GR 
Sbjct: 12  LNNPQINAISNPNARLRPLARFTRCSATCVERKRWLGTKLRSGGGPERIQLWESGGLGRL 71

Query: 100 PKLKVVVRSSMSQVPEKPLGLYDPSFEKDSCGV 2
           PKL+V V+SS S VP+KP+GLYDP+F+KDSCGV
Sbjct: 72  PKLRVAVKSSFSAVPDKPMGLYDPAFDKDSCGV 104


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