BLASTX nr result

ID: Panax21_contig00003538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003538
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor ...   138   4e-31
ref|XP_004150098.1| PREDICTED: probable ADP-ribosylation factor ...   128   4e-28
ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor ...   125   4e-27
ref|XP_002531044.1| Stromal membrane-associated protein, putativ...   120   9e-26
ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD5-like isoform 2 [Vitis vinifera]
           gi|302143074|emb|CBI20369.3| unnamed protein product
           [Vitis vinifera]
          Length = 478

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/121 (57%), Positives = 84/121 (69%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   KYEEKRWLSKDGKPNSPSREQEEQVPAQLQRPADGSGYGYASNSENFSNERMKFQAPSTK 181
           KYE+KRW+ KDGKP S S+ +EE+  A   RP D  G G  SNSEN   E+   QAPS K
Sbjct: 116 KYEDKRWIPKDGKPRSTSQGREEKASAHWHRPGDRGGSGNTSNSENSFEEKKNVQAPSIK 175

Query: 182 NSIPSTRISIPVPPKGPETVAPAPKPQQVIQKLEPVVPPAESVQQVSEA---VSTPKVDY 352
           ++ P+TRIS+PVPPKGPE VAP PKP QV QK EP VP AES +Q +++   V  PKVDY
Sbjct: 176 DNGPATRISLPVPPKGPEPVAPIPKPHQVTQKPEPSVPQAESAKQAADSTPVVPPPKVDY 235

Query: 353 A 355
           A
Sbjct: 236 A 236


>ref|XP_004150098.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD5-like [Cucumis sativus]
          Length = 510

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/121 (53%), Positives = 85/121 (70%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   KYEEKRWLSKDGKPNSPSREQEEQVPAQLQRPADGSGYGYASNSENFSNERMKFQAPSTK 181
           KYE+KRW+SKDGKP SP+R QEE+     QRPA+ S  GY+ +SEN   ER + Q  S +
Sbjct: 116 KYEDKRWVSKDGKPRSPARVQEEKPAFHGQRPAERSVSGYSGHSENLFEERKRVQTHSVR 175

Query: 182 NSIPSTRISIPVPPKGPETVAPAPKPQQVIQKLEPVVPPAESVQQVSE---AVSTPKVDY 352
            S+P++R+S+PVPP+GPE +  APKP+Q  QK EPVV  AE+ +Q +     VS PKVDY
Sbjct: 176 ESVPASRVSLPVPPRGPEQITSAPKPRQE-QKPEPVVQQAEATKQTTNDAPTVSPPKVDY 234

Query: 353 A 355
           A
Sbjct: 235 A 235


>ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD5-like isoform 1 [Vitis vinifera]
          Length = 475

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/121 (54%), Positives = 81/121 (66%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   KYEEKRWLSKDGKPNSPSREQEEQVPAQLQRPADGSGYGYASNSENFSNERMKFQAPSTK 181
           KYE+KRW+ KDGKP S S+ +EE+  A   RP D  G G  SNSEN   E+   QAPS K
Sbjct: 116 KYEDKRWIPKDGKPRSTSQGREEKASAHWHRPGDRGGSGNTSNSENSFEEKKNVQAPSIK 175

Query: 182 NSIPSTRISIPVPPKGPETVAPAPKPQQVIQKLEPVVPPAESVQQVSEA---VSTPKVDY 352
           ++ P+TRIS+PVPPKGPE   P  +P QV QK EP VP AES +Q +++   V  PKVDY
Sbjct: 176 DNGPATRISLPVPPKGPE---PVCEPHQVTQKPEPSVPQAESAKQAADSTPVVPPPKVDY 232

Query: 353 A 355
           A
Sbjct: 233 A 233


>ref|XP_002531044.1| Stromal membrane-associated protein, putative [Ricinus communis]
           gi|223529372|gb|EEF31337.1| Stromal membrane-associated
           protein, putative [Ricinus communis]
          Length = 482

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/120 (50%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
 Frame = +2

Query: 2   KYEEKRWLSKDGKPNSPSREQEEQVPAQLQRPADGSGYGYASNSENFSNERMKFQAPSTK 181
           KYEEKRW+ KDGKP SP + ++E+     QR  + SG  Y S+SEN S++R   Q PS+K
Sbjct: 116 KYEEKRWVPKDGKPQSPPQGRDERPYMSGQRSNERSGPQYTSSSENVSDDRKNPQPPSSK 175

Query: 182 NSIPSTRISIPVPPKGPETVAPAPKPQQVIQKLEPVVPPAESVQQVSEAVST--PKVDYA 355
            S P+TR+S+P+PPKGPE V P  KPQ VIQK EP V P E+ +  + A     PKV++A
Sbjct: 176 VSFPTTRVSLPIPPKGPEEVTPPSKPQNVIQKTEPRVNPGEATKNAATAAPAPPPKVNFA 235


>ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|222859996|gb|EEE97543.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   KYEEKRWLSKDGKPNSPSREQEEQVPAQLQRPADGSGYGYASNSENFSNERMKFQAPSTK 181
           KYEEKRW+SKDG+  SP    +E+  +  QRP + SG+G  S+SEN   E+   Q  S++
Sbjct: 116 KYEEKRWVSKDGRAQSPPSGLDER--SLHQRPGERSGHGRTSSSENLFEEKKNSQVSSSR 173

Query: 182 NSIPSTRISIPVPPKGPETVAPAPKPQQVIQKLEPVVPPAESVQQVSE---AVSTPKVDY 352
           NS  +TRIS+PVPP+GPE V PA KPQQV++K EP+V   E+ ++V++   AVS PKVD+
Sbjct: 174 NSATATRISVPVPPRGPEQVTPA-KPQQVVEKAEPMVEATEAAKKVADAAPAVSAPKVDF 232

Query: 353 A 355
           A
Sbjct: 233 A 233


Top