BLASTX nr result

ID: Panax21_contig00003535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003535
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95689.1| unknown [Populus trichocarpa]                          274   4e-71
ref|XP_002329852.1| predicted protein [Populus trichocarpa] gi|2...   270   4e-70
emb|CBI22146.3| unnamed protein product [Vitis vinifera]              254   4e-65
ref|XP_002267296.1| PREDICTED: uncharacterized protein LOC100243...   254   4e-65
ref|XP_002509615.1| conserved hypothetical protein [Ricinus comm...   245   2e-62

>gb|ABK95689.1| unknown [Populus trichocarpa]
          Length = 372

 Score =  274 bits (700), Expect = 4e-71
 Identities = 148/297 (49%), Positives = 184/297 (61%), Gaps = 12/297 (4%)
 Frame = -3

Query: 1224 GGSPLMKGFPSGFS--AGSPLMNA---------PLPFGFASESPLMNAPHPSGFFDGQSS 1078
            GG+P +   P+ F     SP  N          P PF     SP  N  HPSGF D Q+ 
Sbjct: 59   GGNPFVNMHPAPFPNMLPSPFPNMHPSPFPNMLPSPFPNMHPSPFPNL-HPSGFADHQAP 117

Query: 1077 QTNRSRGPIIEELNSXXXXXXXXXXXXXDNPKKHGRSSKGPYVEDPDDQIEERNSKQMHY 898
            +  +SRGPIIEEL+S              NP+KHGRSSK PYVEDPDD+ E R SK + Y
Sbjct: 118  ELKKSRGPIIEELDSDNEKGEGDREKKE-NPRKHGRSSKEPYVEDPDDEAEARKSKHLQY 176

Query: 897  CNELKSVNNSQPHAQAQSFAFQSSTVTYGGSNGAYYTSARTMRTGSDGLTIDESKEADST 718
             N+  S N  +   Q +SF FQSSTVT+GG+NGAYYTS++T R GSDGLT +ESK ADS 
Sbjct: 177  SNDYSSFNGMESQPQGRSFTFQSSTVTHGGANGAYYTSSKTRRAGSDGLTFEESKAADSA 236

Query: 717  TGRAAHRLSRGIHDKGHTVTRNLQSDGRVDTMQVLHNLNEDDLAGFEETWKGKTRKRLPG 538
            TG+A H++SRG+H+KGH++TR L SDGRV+TMQ+LHNLNED+L GFEE WKG   K LPG
Sbjct: 237  TGQATHKVSRGLHNKGHSLTRKLNSDGRVNTMQMLHNLNEDELTGFEEAWKGNAGKHLPG 296

Query: 537  WSEGF-NVXXXXXXXXXXXXXXXXXGWALPSTERSQLSGHNKPDGRMKANNAGRKGS 370
            W+  F  +                 GWALPS E+SQ SG   PD  + A ++G++ S
Sbjct: 297  WTGSFTGIDNIGASRSGQNTQASRGGWALPSAEQSQHSGRMVPDTTVGAGSSGKQQS 353


>ref|XP_002329852.1| predicted protein [Populus trichocarpa] gi|222871089|gb|EEF08220.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  270 bits (691), Expect = 4e-70
 Identities = 147/299 (49%), Positives = 184/299 (61%), Gaps = 14/299 (4%)
 Frame = -3

Query: 1224 GGSPLMKGFPSGFS--AGSPLMNA---------PLPFGFASESPLMNAPHPSGFFDGQSS 1078
            GG+P +   P+ F     SP  N          P PF     SP  N  HPSGF D Q+ 
Sbjct: 59   GGNPFVNMHPAPFPNMLPSPFPNMHPSPFPNMLPSPFPNMHPSPFPNL-HPSGFADHQAP 117

Query: 1077 QTNRSRGPIIEELNSXXXXXXXXXXXXXDNPKKHGRSSKGPYVEDPDDQIEERNSKQMHY 898
            +  +SRGPIIEEL+S              NP+KHGRS+K PYVEDPDD+ E R SK + Y
Sbjct: 118  ELKKSRGPIIEELDSDNEKGEGDREKKE-NPRKHGRSTKEPYVEDPDDEAEARKSKHLQY 176

Query: 897  CNELKSVNNSQPHAQAQSFAFQSSTVTYGGSNGAYYTSARTMRTGSDGLTIDESKEADST 718
             N+  S N  +   Q +SF FQSSTVT+GG+NGAYYTS++T R GSDGLT +ESK ADS 
Sbjct: 177  SNDYSSFNGMESQPQGRSFTFQSSTVTHGGANGAYYTSSKTRRAGSDGLTFEESKAADSA 236

Query: 717  TGRAAHRLSRGIHDKGHTVTRNLQSDGRVDTMQVLHNLNEDDLAGFEETWKGKTRKRLPG 538
            TG+A H++SRG+H+KGH++TR L SDGRV+TMQ+LHNLNED+L GFEE WKG   K LPG
Sbjct: 237  TGQATHKVSRGLHNKGHSLTRKLNSDGRVNTMQMLHNLNEDELTGFEEAWKGNAGKHLPG 296

Query: 537  WS---EGFNVXXXXXXXXXXXXXXXXXGWALPSTERSQLSGHNKPDGRMKANNAGRKGS 370
            W+    G +                  GWALPS E+SQ SG   PD  + A ++G++ S
Sbjct: 297  WTGSFTGIDNIGTGASRSGQNTQASRGGWALPSAEQSQHSGRMVPDTTVGAGSSGKQQS 355


>emb|CBI22146.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  254 bits (648), Expect = 4e-65
 Identities = 139/255 (54%), Positives = 166/255 (65%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1131 SPLMNAPHPSGFFDGQSSQTNRSRGPIIEELNSXXXXXXXXXXXXXDNPKKHGRSSKGPY 952
            SP M  P  +GF + Q  Q N +RGPIIEELNS              NP+KH RSSK PY
Sbjct: 143  SPFMAMPG-TGFLEHQVQQPN-TRGPIIEELNSDDEKEEEEKKD---NPRKHRRSSKEPY 197

Query: 951  VEDPDDQIEERNSKQMHYCNELKSVNNSQPHAQAQSFAFQSSTVTYGGSNGAYYTSARTM 772
            VED DD+   R SKQM Y NE   + N+QP  Q +SF+F SSTVTYGG+NG YYTS+ T 
Sbjct: 198  VEDADDEASGRKSKQMQYRNEYNRMTNTQPQPQPRSFSFTSSTVTYGGTNGPYYTSSTTR 257

Query: 771  RTGSDGLTIDESKEADSTTGRAAHRLSRGIHDKGHTVTRNLQSDGRVDTMQVLHNLNEDD 592
            RTGSDGLT +ESKEAD+TT +AAHR+SRGI +KGH+VTR L SDG+VDTMQ LHNLNE++
Sbjct: 258  RTGSDGLTFEESKEADTTTRQAAHRVSRGIRNKGHSVTRKLNSDGQVDTMQALHNLNENE 317

Query: 591  LAGFEETWKGKTRKRLPGWSEGFN-VXXXXXXXXXXXXXXXXXGWALPSTERSQLSGHNK 415
            L+GFEE W+G  +K LPGW+E FN +                 GWALPSTER   S  + 
Sbjct: 318  LSGFEEAWQGNAKKYLPGWNERFNGLDNIGHGSSGQTGQANRGGWALPSTERVMPSSSHS 377

Query: 414  PDGRMKANNAGRKGS 370
               R +A    R GS
Sbjct: 378  QHPRTEAEIGDRTGS 392


>ref|XP_002267296.1| PREDICTED: uncharacterized protein LOC100243132 [Vitis vinifera]
          Length = 329

 Score =  254 bits (648), Expect = 4e-65
 Identities = 139/255 (54%), Positives = 166/255 (65%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1131 SPLMNAPHPSGFFDGQSSQTNRSRGPIIEELNSXXXXXXXXXXXXXDNPKKHGRSSKGPY 952
            SP M  P  +GF + Q  Q N +RGPIIEELNS              NP+KH RSSK PY
Sbjct: 65   SPFMAMPG-TGFLEHQVQQPN-TRGPIIEELNSDDEKEEEEKKD---NPRKHRRSSKEPY 119

Query: 951  VEDPDDQIEERNSKQMHYCNELKSVNNSQPHAQAQSFAFQSSTVTYGGSNGAYYTSARTM 772
            VED DD+   R SKQM Y NE   + N+QP  Q +SF+F SSTVTYGG+NG YYTS+ T 
Sbjct: 120  VEDADDEASGRKSKQMQYRNEYNRMTNTQPQPQPRSFSFTSSTVTYGGTNGPYYTSSTTR 179

Query: 771  RTGSDGLTIDESKEADSTTGRAAHRLSRGIHDKGHTVTRNLQSDGRVDTMQVLHNLNEDD 592
            RTGSDGLT +ESKEAD+TT +AAHR+SRGI +KGH+VTR L SDG+VDTMQ LHNLNE++
Sbjct: 180  RTGSDGLTFEESKEADTTTRQAAHRVSRGIRNKGHSVTRKLNSDGQVDTMQALHNLNENE 239

Query: 591  LAGFEETWKGKTRKRLPGWSEGFN-VXXXXXXXXXXXXXXXXXGWALPSTERSQLSGHNK 415
            L+GFEE W+G  +K LPGW+E FN +                 GWALPSTER   S  + 
Sbjct: 240  LSGFEEAWQGNAKKYLPGWNERFNGLDNIGHGSSGQTGQANRGGWALPSTERVMPSSSHS 299

Query: 414  PDGRMKANNAGRKGS 370
               R +A    R GS
Sbjct: 300  QHPRTEAEIGDRTGS 314


>ref|XP_002509615.1| conserved hypothetical protein [Ricinus communis]
            gi|223549514|gb|EEF51002.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 342

 Score =  245 bits (625), Expect = 2e-62
 Identities = 140/304 (46%), Positives = 179/304 (58%), Gaps = 11/304 (3%)
 Frame = -3

Query: 1194 SGFSAGSPLMNAPL---PFG-------FASESPLMNAPHPSGFFDGQSSQTNR-SRGPII 1048
            SGF  G    + P    PFG       F S    + + HPS F + Q+ +  R SRGPII
Sbjct: 37   SGFFGGRDPFDDPFFTRPFGGMFESSFFGSNGSPLASMHPSPFVEHQALEPPRNSRGPII 96

Query: 1047 EELNSXXXXXXXXXXXXXDNPKKHGRSSKGPYVEDPDDQIEERNSKQMHYCNELKSVNNS 868
            EELNS              NP+KHGR SK PYVEDPDD+ EER SK + Y +     N  
Sbjct: 97   EELNSDDDKEEADKGKKE-NPRKHGRPSKEPYVEDPDDEAEERKSKHLQYRSSHNRFNGM 155

Query: 867  QPHAQAQSFAFQSSTVTYGGSNGAYYTSARTMRTGSDGLTIDESKEADSTTGRAAHRLSR 688
            +   Q +SF FQSSTVTYGG+NGAYYTS+++ R GSDGLT++ESKEAD++T +A+HR+SR
Sbjct: 156  EQQPQTRSFTFQSSTVTYGGANGAYYTSSKSRRAGSDGLTVEESKEADTSTRKASHRISR 215

Query: 687  GIHDKGHTVTRNLQSDGRVDTMQVLHNLNEDDLAGFEETWKGKTRKRLPGWSEGFNVXXX 508
            G+H+KGHT+TRNL SDG+V+TMQ LHNL+ED+LA F E WK   R+ LPGW+  F+    
Sbjct: 216  GLHNKGHTLTRNLNSDGKVETMQTLHNLHEDELADFGEVWKQNARQALPGWTGNFS-GHD 274

Query: 507  XXXXXXXXXXXXXXGWALPSTERSQLSGHNKPDGRMKANNAGRKGS*VRSHTGNMLPLSK 328
                          GWALP+TE  +       D R       R+ S  + H+G M   S 
Sbjct: 275  SMGASSSGRNASMGGWALPATEHVEQLERAVTDAR------DRETSSQKQHSGRMKGSSN 328

Query: 327  TQSK 316
             + K
Sbjct: 329  VKDK 332


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