BLASTX nr result

ID: Panax21_contig00003526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00003526
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002512482.1| ATP-binding cassette transporter, putative [...    94   1e-17
ref|XP_002519313.1| ATP-binding cassette transporter, putative [...    93   3e-17
ref|XP_003550950.1| PREDICTED: pleiotropic drug resistance prote...    92   4e-17
ref|XP_002334346.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16

>ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|222843270|gb|EEE80817.1|
            predicted protein [Populus trichocarpa]
          Length = 1368

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 41/57 (71%), Positives = 50/57 (87%)
 Frame = +1

Query: 394  LYFSTRFPQNEWEQFKACLWKQNLSYWRSPKYNLGRITFIIMASLLLVAIFWRKGKE 564
            L+FSTRFPQN WEQFKACLWKQ LSYWRSPKYNL R+ FII++SL+  A+ W+KG++
Sbjct: 1081 LHFSTRFPQNAWEQFKACLWKQELSYWRSPKYNLVRLIFIIVSSLIFGALLWQKGQK 1137


>ref|XP_002512482.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223548443|gb|EEF49934.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1458

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 40/80 (50%), Positives = 54/80 (67%)
 Frame = +1

Query: 325  SSLHRKTKXXXXXXXXXXXXXXXLYFSTRFPQNEWEQFKACLWKQNLSYWRSPKYNLGRI 504
            S+L+++ K               L+FSTRFPQN WEQFKAC WK ++SYWRSP YNL R+
Sbjct: 1131 STLYKENKELVKQLSSPMPGSKELHFSTRFPQNGWEQFKACFWKHHMSYWRSPSYNLTRL 1190

Query: 505  TFIIMASLLLVAIFWRKGKE 564
             +++ AS L  A+FW++GKE
Sbjct: 1191 VYMVAASFLFGALFWQRGKE 1210


>ref|XP_002519313.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223541628|gb|EEF43177.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1393

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 41/80 (51%), Positives = 54/80 (67%)
 Frame = +1

Query: 325  SSLHRKTKXXXXXXXXXXXXXXXLYFSTRFPQNEWEQFKACLWKQNLSYWRSPKYNLGRI 504
            S+L+++ K               L FSTRFPQN WEQFKACLWK +LSYWR+P YNL RI
Sbjct: 1095 STLYKENKELIKQLQKPMPGSKELQFSTRFPQNGWEQFKACLWKHHLSYWRNPSYNLTRI 1154

Query: 505  TFIIMASLLLVAIFWRKGKE 564
             F+I  S++  A+FW++GK+
Sbjct: 1155 VFMIAGSIIFGALFWQQGKK 1174


>ref|XP_003550950.1| PREDICTED: pleiotropic drug resistance protein 3-like [Glycine max]
          Length = 1452

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 41/80 (51%), Positives = 53/80 (66%)
 Frame = +1

Query: 325  SSLHRKTKXXXXXXXXXXXXXXXLYFSTRFPQNEWEQFKACLWKQNLSYWRSPKYNLGRI 504
            S+L+ + K               LYF + FPQN WEQFKACLWKQ+LSYWRSP YNL RI
Sbjct: 1142 STLYEQNKELVEQLSSPPPNSRDLYFPSHFPQNGWEQFKACLWKQHLSYWRSPSYNLMRI 1201

Query: 505  TFIIMASLLLVAIFWRKGKE 564
             F+ ++SLL   +FW++GK+
Sbjct: 1202 IFVAVSSLLFGILFWKQGKK 1221


>ref|XP_002334346.1| predicted protein [Populus trichocarpa] gi|222871385|gb|EEF08516.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 39/57 (68%), Positives = 46/57 (80%)
 Frame = +1

Query: 394 LYFSTRFPQNEWEQFKACLWKQNLSYWRSPKYNLGRITFIIMASLLLVAIFWRKGKE 564
           L FST FPQ+ WEQF ACLWKQ+LSYWRSP+YNL R   +I+ASLL   +FW+KGKE
Sbjct: 94  LQFSTPFPQSRWEQFTACLWKQHLSYWRSPEYNLSRFIVMIVASLLFGIVFWQKGKE 150


Top