BLASTX nr result

ID: Panax21_contig00002496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002496
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-26
ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|2...    99   2e-24
ref|XP_002524389.1| protein binding protein, putative [Ricinus c...    98   2e-23
emb|CAN78722.1| hypothetical protein VITISV_020005 [Vitis vinifera]    91   7e-22
ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242...    91   7e-22

>ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|222865006|gb|EEF02137.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  106 bits (265), Expect(2) = 3e-26
 Identities = 60/127 (47%), Positives = 67/127 (52%)
 Frame = -2

Query: 461 MQSHYPRXXXXXXXXXXSAGTRSLTDLGSHTAQLGQPGSSYQGGMPLYQXXXXXXXXXXX 282
           +QSHYPR           A + SLTDLGSH    GQP  ++QGGMPLYQ           
Sbjct: 113 IQSHYPRPFATSTGFPS-AVSGSLTDLGSHNGPGGQPAMNFQGGMPLYQPGGSLGTWGAS 171

Query: 281 XXXXSANGSGLAMPMYWPGYYVXXXXXXXXXXXXXXXXXXXXSMPSSMQQPMQYPAFNAS 102
               +ANGSGLAMPMYW G+Y                     +MPSSMQQPMQYP FN S
Sbjct: 172 PPPPNANGSGLAMPMYWQGFYAPPNGLPHLHQQSLLRPPPGLAMPSSMQQPMQYPNFNTS 231

Query: 101 LPTGASN 81
           L TG SN
Sbjct: 232 LLTGISN 238



 Score = 38.5 bits (88), Expect(2) = 3e-26
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = -1

Query: 630 LQDL*VKSSPPVQSPIQTAPPINSDPAIIQ 541
           ++DL VKSSPPVQS    AP IN+DPAIIQ
Sbjct: 89  IKDLQVKSSPPVQS----APHINNDPAIIQ 114


>ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|222851248|gb|EEE88795.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score = 99.4 bits (246), Expect(2) = 2e-24
 Identities = 58/127 (45%), Positives = 67/127 (52%)
 Frame = -2

Query: 461 MQSHYPRXXXXXXXXXXSAGTRSLTDLGSHTAQLGQPGSSYQGGMPLYQXXXXXXXXXXX 282
           +QSHYPR           A + SLTDLGS+    G PGS++QGG+PLYQ           
Sbjct: 106 IQSHYPRPVATSTSLPS-AVSGSLTDLGSNNGPGGLPGSNFQGGLPLYQPGGSLGAWGVS 164

Query: 281 XXXXSANGSGLAMPMYWPGYYVXXXXXXXXXXXXXXXXXXXXSMPSSMQQPMQYPAFNAS 102
               +ANG+GLAMPMYW  YY                     +MP SMQQPMQYP FN S
Sbjct: 165 PPPPNANGNGLAMPMYWQSYY-GPPNGIPHLHQSLLRPPPGLAMPPSMQQPMQYPNFNTS 223

Query: 101 LPTGASN 81
           LPTGA N
Sbjct: 224 LPTGALN 230



 Score = 39.7 bits (91), Expect(2) = 2e-24
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = -1

Query: 630 LQDL*VKSSPPVQSPIQTAPPINSDPAIIQ 541
           ++DL VKSSPPVQS     PPIN+DPAIIQ
Sbjct: 82  IKDLQVKSSPPVQS----FPPINNDPAIIQ 107


>ref|XP_002524389.1| protein binding protein, putative [Ricinus communis]
           gi|223536350|gb|EEF38000.1| protein binding protein,
           putative [Ricinus communis]
          Length = 665

 Score = 97.8 bits (242), Expect(2) = 2e-23
 Identities = 55/127 (43%), Positives = 67/127 (52%)
 Frame = -2

Query: 461 MQSHYPRXXXXXXXXXXSAGTRSLTDLGSHTAQLGQPGSSYQGGMPLYQXXXXXXXXXXX 282
           +QSHYPR           A + SL+D+G H AQ+G  GS++QGG+PLYQ           
Sbjct: 114 IQSHYPRPVATSASLPP-AVSGSLSDIGPHNAQIGLTGSNFQGGLPLYQPGGNIGTWGAS 172

Query: 281 XXXXSANGSGLAMPMYWPGYYVXXXXXXXXXXXXXXXXXXXXSMPSSMQQPMQYPAFNAS 102
               SANG+GLAMPMYW GYY                     SMP  +QQPMQY ++NA 
Sbjct: 173 PPPPSANGNGLAMPMYWQGYYAPPNGLPHLHQQSLLRPPPGLSMPPPIQQPMQYSSYNAP 232

Query: 101 LPTGASN 81
           L TGA N
Sbjct: 233 LHTGAPN 239



 Score = 37.7 bits (86), Expect(2) = 2e-23
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = -1

Query: 630 LQDL*VKSSPPVQSPIQTAPPINSDPAIIQ 541
           ++DL VKSSPP Q P  T PPIN+DPAIIQ
Sbjct: 88  IKDLQVKSSPPAQ-PTPT-PPINNDPAIIQ 115


>emb|CAN78722.1| hypothetical protein VITISV_020005 [Vitis vinifera]
          Length = 665

 Score = 91.3 bits (225), Expect(2) = 7e-22
 Identities = 55/127 (43%), Positives = 62/127 (48%)
 Frame = -2

Query: 461 MQSHYPRXXXXXXXXXXSAGTRSLTDLGSHTAQLGQPGSSYQGGMPLYQXXXXXXXXXXX 282
           +QSHYPR          +  +  L DL SH AQLG PGS++QGG+PLYQ           
Sbjct: 121 IQSHYPRPATTSASLPSTV-SGPLPDLSSHNAQLGLPGSTFQGGLPLYQPGGNLGSWGPA 179

Query: 281 XXXXSANGSGLAMPMYWPGYYVXXXXXXXXXXXXXXXXXXXXSMPSSMQQPMQYPAFNAS 102
               +ANGSGL MPMYW GYY                     SMP     PMQYP FNAS
Sbjct: 180 PPPPTANGSGLTMPMYWQGYYGPPNGLPHLHQQSLLRPPPVLSMP-----PMQYPGFNAS 234

Query: 101 LPTGASN 81
           L  GA N
Sbjct: 235 LQPGAPN 241



 Score = 39.3 bits (90), Expect(2) = 7e-22
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = -1

Query: 630 LQDL*VKSSPPVQSPIQTAPPINSDPAIIQ 541
           L DL VKSSPPVQ+     PPIN+DPAIIQ
Sbjct: 97  LPDLQVKSSPPVQA----TPPINNDPAIIQ 122


>ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242198 [Vitis vinifera]
          Length = 616

 Score = 91.3 bits (225), Expect(2) = 7e-22
 Identities = 55/127 (43%), Positives = 62/127 (48%)
 Frame = -2

Query: 461 MQSHYPRXXXXXXXXXXSAGTRSLTDLGSHTAQLGQPGSSYQGGMPLYQXXXXXXXXXXX 282
           +QSHYPR          +  +  L DL SH AQLG PGS++QGG+PLYQ           
Sbjct: 105 IQSHYPRPATTSASLPSTV-SGPLPDLSSHNAQLGLPGSTFQGGLPLYQPGGNLGSWGPA 163

Query: 281 XXXXSANGSGLAMPMYWPGYYVXXXXXXXXXXXXXXXXXXXXSMPSSMQQPMQYPAFNAS 102
               +ANGSGL MPMYW GYY                     SMP     PMQYP FNAS
Sbjct: 164 PPPPTANGSGLTMPMYWQGYYGPPNGLPHLHQQSLLRPPPVLSMP-----PMQYPGFNAS 218

Query: 101 LPTGASN 81
           L  GA N
Sbjct: 219 LQPGAPN 225



 Score = 39.3 bits (90), Expect(2) = 7e-22
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = -1

Query: 630 LQDL*VKSSPPVQSPIQTAPPINSDPAIIQ 541
           ++DL VKSSPPVQ+     PPIN+DPAIIQ
Sbjct: 81  IKDLQVKSSPPVQA----TPPINNDPAIIQ 106


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