BLASTX nr result

ID: Panax21_contig00002488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002488
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514795.1| Protein ariadne-1, putative [Ricinus communi...   199   5e-49
ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...   197   1e-48
emb|CBI38350.3| unnamed protein product [Vitis vinifera]              197   1e-48
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]   197   1e-48
ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|2...   196   4e-48

>ref|XP_002514795.1| Protein ariadne-1, putative [Ricinus communis]
           gi|223545846|gb|EEF47349.1| Protein ariadne-1, putative
           [Ricinus communis]
          Length = 513

 Score =  199 bits (506), Expect = 5e-49
 Identities = 97/124 (78%), Positives = 106/124 (85%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   LHQCAEKELQGYLNVEGPSKDFNEFRAKLAGLTSVTRNYFENLVRALENGLSDVNSHAAC 182
           LHQCAEKELQ YL  EGPSKDFNEFR KLAGLTSVTRNYFENLVRALENGLSDV+SH AC
Sbjct: 390 LHQCAEKELQVYLTAEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSHGAC 449

Query: 183 SRTTSSKSL-GGCSKGRSNRGKG-TAXXXXXXRNLDDSGHWSCEYCTFANVKSATVCQMC 356
           SRT SSKSL GG S+GR  RGKG T+      RN+DDSGHWSCE+CTFAN+++AT+C MC
Sbjct: 450 SRTASSKSLGGGSSRGRGGRGKGSTSRSSGPSRNIDDSGHWSCEHCTFANIRTATICAMC 509

Query: 357 QQRR 368
           QQRR
Sbjct: 510 QQRR 513


>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
           vinifera]
          Length = 652

 Score =  197 bits (502), Expect = 1e-48
 Identities = 98/124 (79%), Positives = 106/124 (85%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   LHQCAEKELQGYLNVEGPSKDFNEFRAKLAGLTSVTRNYFENLVRALENGLSDVNSHAAC 182
           LHQCAEKELQ YL+ +GPSKDFNEFR KLAGLTSVTRNYFENLVRALENGLSDV+S  AC
Sbjct: 529 LHQCAEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGAC 588

Query: 183 SRTTSSKSL-GGCSKGRSNRGKGT-AXXXXXXRNLDDSGHWSCEYCTFANVKSATVCQMC 356
           SRT SSKSL GG SK R  RGKGT +      RNLDDSGHWSCE+CTFANV+SAT+CQ+C
Sbjct: 589 SRTASSKSLGGGSSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQIC 648

Query: 357 QQRR 368
           QQRR
Sbjct: 649 QQRR 652


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  197 bits (502), Expect = 1e-48
 Identities = 98/124 (79%), Positives = 106/124 (85%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   LHQCAEKELQGYLNVEGPSKDFNEFRAKLAGLTSVTRNYFENLVRALENGLSDVNSHAAC 182
           LHQCAEKELQ YL+ +GPSKDFNEFR KLAGLTSVTRNYFENLVRALENGLSDV+S  AC
Sbjct: 458 LHQCAEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGAC 517

Query: 183 SRTTSSKSL-GGCSKGRSNRGKGT-AXXXXXXRNLDDSGHWSCEYCTFANVKSATVCQMC 356
           SRT SSKSL GG SK R  RGKGT +      RNLDDSGHWSCE+CTFANV+SAT+CQ+C
Sbjct: 518 SRTASSKSLGGGSSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQIC 577

Query: 357 QQRR 368
           QQRR
Sbjct: 578 QQRR 581


>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
          Length = 588

 Score =  197 bits (502), Expect = 1e-48
 Identities = 98/124 (79%), Positives = 106/124 (85%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   LHQCAEKELQGYLNVEGPSKDFNEFRAKLAGLTSVTRNYFENLVRALENGLSDVNSHAAC 182
           LHQCAEKELQ YL+ +GPSKDFNEFR KLAGLTSVTRNYFENLVRALENGLSDV+S  AC
Sbjct: 465 LHQCAEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGAC 524

Query: 183 SRTTSSKSL-GGCSKGRSNRGKGT-AXXXXXXRNLDDSGHWSCEYCTFANVKSATVCQMC 356
           SRT SSKSL GG SK R  RGKGT +      RNLDDSGHWSCE+CTFANV+SAT+CQ+C
Sbjct: 525 SRTASSKSLGGGSSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQIC 584

Query: 357 QQRR 368
           QQRR
Sbjct: 585 QQRR 588


>ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|222864157|gb|EEF01288.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score =  196 bits (498), Expect = 4e-48
 Identities = 96/124 (77%), Positives = 104/124 (83%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   LHQCAEKELQGYLNVEGPSKDFNEFRAKLAGLTSVTRNYFENLVRALENGLSDVNSHAAC 182
           LHQCAEKELQ YLN EGPSKDFNEFR KLAGLTSVTRNYFENLVRALENGLSDV+SH  C
Sbjct: 468 LHQCAEKELQIYLNAEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSHGTC 527

Query: 183 SRTTSSKSL-GGCSKGRSNRGKG-TAXXXXXXRNLDDSGHWSCEYCTFANVKSATVCQMC 356
           SRT SSKSL GG S+ R+ RGKG T+      RN+DD GHWSCE+CTFAN+K AT+C MC
Sbjct: 528 SRTASSKSLGGGSSRARAGRGKGSTSRSSGPSRNIDDPGHWSCEHCTFANIKPATICAMC 587

Query: 357 QQRR 368
           QQRR
Sbjct: 588 QQRR 591


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