BLASTX nr result

ID: Panax21_contig00002476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002476
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]    75   2e-11
gb|ADN33832.1| hypothetical protein [Cucumis melo subsp. melo]         75   3e-11
ref|XP_002314615.1| predicted protein [Populus trichocarpa] gi|2...    73   8e-11
ref|XP_003613224.1| hypothetical protein MTR_5g034200 [Medicago ...    69   2e-09
ref|XP_002888781.1| hypothetical protein ARALYDRAFT_476167 [Arab...    69   2e-09

>emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]
          Length = 119

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 51/131 (38%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
 Frame = -1

Query: 642 MSQPVEVYPTPFPNPVTQRPAASHHSNESFGTVFXXXXXXXXXXXXACFLGRVCN-KRHN 466
           MS P +  P  +PN VT++P +  HSN SFGTVF            AC LGR+CN +RH+
Sbjct: 1   MSLPQQQPPVIYPNTVTRQPPS--HSNGSFGTVFIVLGVIVVISAIACVLGRLCNRRRHH 58

Query: 465 RPKDKHNQAPFGSXXXXXXXXKHASQPRDGDIEFGFDKRFSSAKVAANEDFRGGPK---- 298
            P  K N                A +P++ D+EFGFDK   +AK A N    GGPK    
Sbjct: 59  HPNPKQNS---------------AFRPKEPDLEFGFDKGRPTAKPAGN----GGPKHNGH 99

Query: 297 -AFQNGTARGD 268
             F+NG  R +
Sbjct: 100 RPFENGEIRAE 110


>gb|ADN33832.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 192

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 3/176 (1%)
 Frame = -1

Query: 654 QPRKMSQPVEVYPTPFPNPVTQRPAASHHSNESFGTVFXXXXXXXXXXXXACFLGRVCNK 475
           Q ++  QP  VYP         +   SHHSN SFG VF            ACFLGR+CN+
Sbjct: 14  QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNR 73

Query: 474 R---HNRPKDKHNQAPFGSXXXXXXXXKHASQPRDGDIEFGFDKRFSSAKVAANEDFRGG 304
           R   H RPK + + A                  ++GDIEFGFD R  S K        G 
Sbjct: 74  RVENHQRPKPEKSHA---GARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGKFPPGGNGN 130

Query: 303 PKAFQNGTARGDGDIEFGFDKRFPSGKGEANEEFRGPKAFHNGKSKRELRFADDGE 136
                NG ++G G+         P+G G + + F      + G+++ E++  D  E
Sbjct: 131 GNG--NGGSKGKGNGNGPIGLNGPNGHGNSFKPFE-----NGGETRSEIKHTDHHE 179


>ref|XP_002314615.1| predicted protein [Populus trichocarpa] gi|222863655|gb|EEF00786.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 51/138 (36%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
 Frame = -1

Query: 660 SHQPRKMSQ-PVEVYPTPFPNPVTQRPAASHHSNESFGTVFXXXXXXXXXXXXACFLGRV 484
           + QP+++ Q PV +YP         R A S HSN SFGTVF            AC LGR+
Sbjct: 3   TQQPQQLQQQPVVLYPN-----TVARQAPSSHSNGSFGTVFIVLAVIVVISAIACCLGRI 57

Query: 483 CNKRHNRPKDKHNQAPFGSXXXXXXXXKHASQPRDGDIEFGFDKRFSSAKVAANEDFRG- 307
           CNKR N+ K  +N+    S            + R+ D+EFGFDK F +A+   N + +G 
Sbjct: 58  CNKRLNKQKVNNNKQ---SLQHSQHTPTFRPKERESDLEFGFDKGFPTAR---NSNMKGS 111

Query: 306 ---GPKAFQNGTARGDGD 262
              G K F NG   G G+
Sbjct: 112 DPRGHKPFGNGHFSGRGE 129


>ref|XP_003613224.1| hypothetical protein MTR_5g034200 [Medicago truncatula]
           gi|355514559|gb|AES96182.1| hypothetical protein
           MTR_5g034200 [Medicago truncatula]
           gi|388520363|gb|AFK48243.1| unknown [Medicago
           truncatula]
          Length = 168

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 55/178 (30%), Positives = 74/178 (41%)
 Frame = -1

Query: 654 QPRKMSQPVEVYPTPFPNPVTQRPAASHHSNESFGTVFXXXXXXXXXXXXACFLGRVCNK 475
           Q ++  QPV+VYPT             H SN SFG+VF            AC LGR C++
Sbjct: 9   QQQQQQQPVQVYPTTVTYQYAPPEPDHHSSNGSFGSVFVVLAIIIVISAVACCLGRFCSR 68

Query: 474 RHNRPKDKHNQAPFGSXXXXXXXXKHASQPRDGDIEFGFDKRFSSAKVAANEDFRGGPKA 295
           R N     H+Q P              S+P++ DIEFGFDK     K+AA++    G   
Sbjct: 69  RGN--GKSHSQKP---VKHQKQQNHQHSRPKEVDIEFGFDK-----KIAASKPMNNGHGG 118

Query: 294 FQNGTARGDGDIEFGFDKRFPSGKGEANEEFRGPKAFHNGKSKRELRFADDGELKPGA 121
           F      G      GF K   +G G    +    +  H+ KS         G+ +PGA
Sbjct: 119 FPKNNGHG------GFSKN--NGHGGVRVQKPVAQGHHDMKSFEIKLGPPQGKYRPGA 168


>ref|XP_002888781.1| hypothetical protein ARALYDRAFT_476167 [Arabidopsis lyrata subsp.
           lyrata] gi|297334622|gb|EFH65040.1| hypothetical protein
           ARALYDRAFT_476167 [Arabidopsis lyrata subsp. lyrata]
          Length = 151

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 49/150 (32%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
 Frame = -1

Query: 654 QPRKMSQPVEVYPTPFPNPVTQRPAASHHSNESFGTVFXXXXXXXXXXXXACFLGRVCNK 475
           QP+++ QP+ VYP+   +  +    +S  S+ SFGT F            AC  GR+CN+
Sbjct: 4   QPQEIQQPLLVYPSTSSSSSSSSSPSSTGSSGSFGTAFIVLAAILVLAAMACVFGRLCNR 63

Query: 474 RHNRPKDKHNQAPF----GSXXXXXXXXKHASQPRD-GDIEFGFDKRFSSAKVAANEDFR 310
              + KDK+N         S            +PR+ GD+EFGFD +            R
Sbjct: 64  GGKQHKDKNNNKTSKHEKPSSKKSREIRPVEREPRERGDVEFGFDMK------------R 111

Query: 309 GGPKAFQNGTARGDGDIEFGFDKRFPSGKG 220
            GP      T R  GDIEFGFD +   G G
Sbjct: 112 PGP--MSKPTGRNGGDIEFGFDNKRGGGGG 139


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