BLASTX nr result
ID: Panax21_contig00002471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00002471
(1143 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283742.1| PREDICTED: snurportin-1 [Vitis vinifera] gi|... 177 6e-47
ref|XP_002511190.1| conserved hypothetical protein [Ricinus comm... 163 3e-43
ref|XP_002321701.1| predicted protein [Populus trichocarpa] gi|2... 162 9e-43
ref|XP_003528111.1| PREDICTED: snurportin-1-like [Glycine max] 166 2e-42
ref|XP_003522434.1| PREDICTED: snurportin-1-like [Glycine max] 165 3e-42
>ref|XP_002283742.1| PREDICTED: snurportin-1 [Vitis vinifera]
gi|297734416|emb|CBI15663.3| unnamed protein product
[Vitis vinifera]
Length = 419
Score = 177 bits (450), Expect(2) = 6e-47
Identities = 86/103 (83%), Positives = 93/103 (90%)
Frame = -3
Query: 781 WKDENCSQYVVDTDSKGQVPHQQQVVLELQGDGKLSTSDDPPVVFGFLSGDFIQKTELHP 602
WKDENCSQYV+DTDSKGQVP QQQVVLELQ DG L+TSDDPPVVFG L GDFIQK+ L
Sbjct: 279 WKDENCSQYVIDTDSKGQVPSQQQVVLELQDDGNLTTSDDPPVVFGSLDGDFIQKSGLCS 338
Query: 601 GNLLRFTVSEGGLNFLDGKLEKADLQYLGKVNRARAFADSYSK 473
GNLLRF VS+GGL+F+DGKLE+ADL YLGKVNRARAFADSYSK
Sbjct: 339 GNLLRFAVSDGGLSFVDGKLERADLHYLGKVNRARAFADSYSK 381
Score = 37.4 bits (85), Expect(2) = 6e-47
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -2
Query: 407 VRHSPLRIEHLFASISSSSEQVNGVCDEEM 318
VRHSPL I+ L ASI+S+++Q CD EM
Sbjct: 388 VRHSPLSIDDLLASITSTNDQEKEACDVEM 417
Score = 140 bits (354), Expect = 5e-31
Identities = 59/77 (76%), Positives = 68/77 (88%)
Frame = -1
Query: 1143 IFHELDQTYYVIDMVCWAGVSFYECTAEFRFFWLNNKLLETGACEAPSLYHKYRFSLLSV 964
IFHELDQTYYVIDMVCW G S Y+CTAEFRFFW+N+KL ETGAC+ PS YH+YRFS++ +
Sbjct: 177 IFHELDQTYYVIDMVCWRGYSLYDCTAEFRFFWVNSKLAETGACDPPSPYHRYRFSVVPI 236
Query: 963 YNCDQEGLHTAYTGAVP 913
YNCDQ GL+TAYTGA P
Sbjct: 237 YNCDQNGLYTAYTGAAP 253
>ref|XP_002511190.1| conserved hypothetical protein [Ricinus communis]
gi|223550305|gb|EEF51792.1| conserved hypothetical
protein [Ricinus communis]
Length = 415
Score = 163 bits (413), Expect(2) = 3e-43
Identities = 79/103 (76%), Positives = 86/103 (83%)
Frame = -3
Query: 781 WKDENCSQYVVDTDSKGQVPHQQQVVLELQGDGKLSTSDDPPVVFGFLSGDFIQKTELHP 602
WKDENCSQYV+DTDSKGQVP QQQVVLELQ DG L +SDDPPVVFG L F+QK LH
Sbjct: 275 WKDENCSQYVIDTDSKGQVPSQQQVVLELQDDGSLISSDDPPVVFGCLDLGFVQKEVLHS 334
Query: 601 GNLLRFTVSEGGLNFLDGKLEKADLQYLGKVNRARAFADSYSK 473
GNL+RF +++GGL F DGKLEKADL YLGK NRARA ADSYSK
Sbjct: 335 GNLVRFAINDGGLRFADGKLEKADLHYLGKPNRARASADSYSK 377
Score = 39.3 bits (90), Expect(2) = 3e-43
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -2
Query: 407 VRHSPLRIEHLFASISSSSEQVNGVCDEEM 318
VRHSPL+I+ L AS+ SS +Q N CD EM
Sbjct: 384 VRHSPLKIDDLLASVCSSDDQQNRPCDIEM 413
Score = 139 bits (350), Expect = 1e-30
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = -1
Query: 1143 IFHELDQTYYVIDMVCWAGVSFYECTAEFRFFWLNNKLLETGACEAPSLYHKYRFSLLSV 964
IFHELDQTYYVIDMVCW G S Y+C+AEFRFFWLN+KL ETGAC PS+YHKYRFS++ V
Sbjct: 173 IFHELDQTYYVIDMVCWRGYSLYDCSAEFRFFWLNSKLGETGACNPPSVYHKYRFSIVPV 232
Query: 963 YNCDQEGLHTAYTGAVP 913
YNCDQ GL +AYTG+VP
Sbjct: 233 YNCDQSGLWSAYTGSVP 249
>ref|XP_002321701.1| predicted protein [Populus trichocarpa] gi|222868697|gb|EEF05828.1|
predicted protein [Populus trichocarpa]
Length = 420
Score = 162 bits (409), Expect(2) = 9e-43
Identities = 79/103 (76%), Positives = 88/103 (85%)
Frame = -3
Query: 781 WKDENCSQYVVDTDSKGQVPHQQQVVLELQGDGKLSTSDDPPVVFGFLSGDFIQKTELHP 602
WKD+NCSQYV+DTD+KG+VP QQQVVLELQ DGKL TSDDPPVVFG L DFIQK+ L
Sbjct: 280 WKDQNCSQYVIDTDNKGEVPTQQQVVLELQDDGKLVTSDDPPVVFGCLDSDFIQKSGLCS 339
Query: 601 GNLLRFTVSEGGLNFLDGKLEKADLQYLGKVNRARAFADSYSK 473
GNLLRF +S+GGL+ +DGKL KADL YL K NRARAFADSYSK
Sbjct: 340 GNLLRFAISDGGLSSVDGKLVKADLHYLEKPNRARAFADSYSK 382
Score = 39.3 bits (90), Expect(2) = 9e-43
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2
Query: 407 VRHSPLRIEHLFASISSSSEQVNGVCDEEMV 315
VRH PL+I+ L ASISS +Q N CD EMV
Sbjct: 389 VRHCPLKIDDLLASISSPDDQQNRPCDIEMV 419
Score = 135 bits (341), Expect = 1e-29
Identities = 59/77 (76%), Positives = 65/77 (84%)
Frame = -1
Query: 1143 IFHELDQTYYVIDMVCWAGVSFYECTAEFRFFWLNNKLLETGACEAPSLYHKYRFSLLSV 964
IFHELDQTYYVIDMVCW G S Y+C AEFRFFWLN+KL ETGAC+ PS YHKYRFS + V
Sbjct: 178 IFHELDQTYYVIDMVCWRGYSLYDCAAEFRFFWLNSKLGETGACDPPSFYHKYRFSTVPV 237
Query: 963 YNCDQEGLHTAYTGAVP 913
YNCDQ GL +AY+G VP
Sbjct: 238 YNCDQNGLFSAYSGDVP 254
>ref|XP_003528111.1| PREDICTED: snurportin-1-like [Glycine max]
Length = 413
Score = 166 bits (419), Expect(2) = 2e-42
Identities = 80/103 (77%), Positives = 89/103 (86%)
Frame = -3
Query: 781 WKDENCSQYVVDTDSKGQVPHQQQVVLELQGDGKLSTSDDPPVVFGFLSGDFIQKTELHP 602
WKDENCSQYV+DTDSKGQVP+QQQVVLELQ DGKL+TSDDPPVVFG L G FIQ++ LH
Sbjct: 273 WKDENCSQYVLDTDSKGQVPNQQQVVLELQEDGKLTTSDDPPVVFGCLDGSFIQQSGLHS 332
Query: 601 GNLLRFTVSEGGLNFLDGKLEKADLQYLGKVNRARAFADSYSK 473
G LLRF++ EGG +DGKLEKADL YLGK NRARA ADS+SK
Sbjct: 333 GCLLRFSIGEGGFVLMDGKLEKADLHYLGKANRARASADSFSK 375
Score = 33.9 bits (76), Expect(2) = 2e-42
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -2
Query: 407 VRHSPLRIEHLFASISSSSEQVNGVCDEEM 318
VRHSPLRIE L S+ +Q + CD EM
Sbjct: 382 VRHSPLRIEGLLESVGLPVDQESKACDVEM 411
Score = 119 bits (299), Expect = 1e-24
Identities = 52/77 (67%), Positives = 60/77 (77%)
Frame = -1
Query: 1143 IFHELDQTYYVIDMVCWAGVSFYECTAEFRFFWLNNKLLETGACEAPSLYHKYRFSLLSV 964
IFHE+DQTYYVIDMVCW +CTAEFRFFWL +KL ETGA + PS YHKYRFSL+ V
Sbjct: 171 IFHEVDQTYYVIDMVCWRDYPLSDCTAEFRFFWLTSKLAETGAFDPPSYYHKYRFSLVPV 230
Query: 963 YNCDQEGLHTAYTGAVP 913
Y+CD GL+ AY+ VP
Sbjct: 231 YSCDSSGLYAAYSAPVP 247
>ref|XP_003522434.1| PREDICTED: snurportin-1-like [Glycine max]
Length = 404
Score = 165 bits (418), Expect(2) = 3e-42
Identities = 79/103 (76%), Positives = 90/103 (87%)
Frame = -3
Query: 781 WKDENCSQYVVDTDSKGQVPHQQQVVLELQGDGKLSTSDDPPVVFGFLSGDFIQKTELHP 602
WKDENCSQYV+DTDSKGQVP+QQQVVLELQ DGKL+TSDDPP+VFG L G FIQ++ LH
Sbjct: 264 WKDENCSQYVLDTDSKGQVPNQQQVVLELQDDGKLTTSDDPPMVFGCLDGSFIQQSGLHS 323
Query: 601 GNLLRFTVSEGGLNFLDGKLEKADLQYLGKVNRARAFADSYSK 473
G LLRF++ EGGL +DGKL+KADL YLGK NRARA ADS+SK
Sbjct: 324 GCLLRFSIGEGGLVLMDGKLDKADLHYLGKANRARASADSFSK 366
Score = 33.9 bits (76), Expect(2) = 3e-42
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -2
Query: 407 VRHSPLRIEHLFASISSSSEQVNGVCDEEM 318
VRHSPLRI+ L S+S +Q + CD EM
Sbjct: 373 VRHSPLRIDGLLESVSLPVDQESKACDIEM 402
Score = 119 bits (299), Expect = 1e-24
Identities = 53/77 (68%), Positives = 59/77 (76%)
Frame = -1
Query: 1143 IFHELDQTYYVIDMVCWAGVSFYECTAEFRFFWLNNKLLETGACEAPSLYHKYRFSLLSV 964
IFHE DQTYYVIDMVCW G +CTAEFRFFWL +KL ET A E PS YHKYRFSL+ V
Sbjct: 162 IFHEADQTYYVIDMVCWRGYPLSDCTAEFRFFWLTSKLAETDAFEPPSHYHKYRFSLVPV 221
Query: 963 YNCDQEGLHTAYTGAVP 913
+NCD GL+ AY+ VP
Sbjct: 222 FNCDSNGLYAAYSAPVP 238