BLASTX nr result

ID: Panax21_contig00002465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002465
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi...    84   9e-20
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi...    84   9e-20
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...    84   1e-19
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...    81   2e-19
ref|XP_002889337.1| hypothetical protein ARALYDRAFT_887229 [Arab...    80   4e-19

>ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520704|gb|AET01158.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2418

 Score = 83.6 bits (205), Expect(2) = 9e-20
 Identities = 38/53 (71%), Positives = 49/53 (92%)
 Frame = +1

Query: 1    VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159
            ++AVTVRFI KD+EEK++SFNP +P+FRLFINWLLDL +LEPV+DGAN Q+L+
Sbjct: 1982 ILAVTVRFIVKDAEEKKVSFNP-RPFFRLFINWLLDLGSLEPVTDGANLQILT 2033



 Score = 40.8 bits (94), Expect(2) = 9e-20
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +2

Query: 251  VLMALANSFHAMQPLKVPAFSLVW 322
            +L A AN+FHA+QPLKVP FS  W
Sbjct: 2031 ILTAFANAFHALQPLKVPGFSFAW 2054


>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520705|gb|AET01159.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2410

 Score = 83.6 bits (205), Expect(2) = 9e-20
 Identities = 38/53 (71%), Positives = 49/53 (92%)
 Frame = +1

Query: 1    VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159
            ++AVTVRFI KD+EEK++SFNP +P+FRLFINWLLDL +LEPV+DGAN Q+L+
Sbjct: 1982 ILAVTVRFIVKDAEEKKVSFNP-RPFFRLFINWLLDLGSLEPVTDGANLQILT 2033



 Score = 40.8 bits (94), Expect(2) = 9e-20
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +2

Query: 251  VLMALANSFHAMQPLKVPAFSLVW 322
            +L A AN+FHA+QPLKVP FS  W
Sbjct: 2031 ILTAFANAFHALQPLKVPGFSFAW 2054


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score = 84.3 bits (207), Expect(2) = 1e-19
 Identities = 39/53 (73%), Positives = 48/53 (90%)
 Frame = +1

Query: 1    VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159
            ++AVTVRFIQKD+EEK+ SFNP +PYFRLFINWL DL +LEP+ DGANFQ+L+
Sbjct: 2001 ILAVTVRFIQKDAEEKKGSFNP-RPYFRLFINWLPDLGSLEPIVDGANFQILT 2052



 Score = 39.7 bits (91), Expect(2) = 1e-19
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +2

Query: 251  VLMALANSFHAMQPLKVPAFSLVW 322
            +L A AN+FHA+ PLK+PAFS  W
Sbjct: 2050 ILTAFANAFHALHPLKIPAFSYAW 2073


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score = 80.9 bits (198), Expect(2) = 2e-19
 Identities = 38/53 (71%), Positives = 47/53 (88%)
 Frame = +1

Query: 1    VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159
            ++AVTVRFI KD+EEK+ SFNP +P FRLFINWLLDL +LEPV+DGAN Q+L+
Sbjct: 2003 ILAVTVRFIIKDAEEKKASFNP-RPLFRLFINWLLDLGSLEPVTDGANLQILT 2054



 Score = 42.4 bits (98), Expect(2) = 2e-19
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +2

Query: 251  VLMALANSFHAMQPLKVPAFSLVW 322
            +L A AN+FHA+QPLKVPAFS  W
Sbjct: 2052 ILTAFANAFHALQPLKVPAFSFAW 2075


>ref|XP_002889337.1| hypothetical protein ARALYDRAFT_887229 [Arabidopsis lyrata subsp.
            lyrata] gi|297335179|gb|EFH65596.1| hypothetical protein
            ARALYDRAFT_887229 [Arabidopsis lyrata subsp. lyrata]
          Length = 2379

 Score = 79.7 bits (195), Expect(2) = 4e-19
 Identities = 37/53 (69%), Positives = 46/53 (86%)
 Frame = +1

Query: 1    VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159
            ++A TVRFI KD+E+K+ S NP KPYFRLFINWLLDL +L+P +DGANFQVL+
Sbjct: 1964 IMAATVRFIHKDAEDKKTSLNP-KPYFRLFINWLLDLCSLDPGTDGANFQVLT 2015



 Score = 42.4 bits (98), Expect(2) = 4e-19
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +2

Query: 251  VLMALANSFHAMQPLKVPAFSLVW 322
            VL A AN+FHA+QPLK+PAFS  W
Sbjct: 2013 VLTAFANAFHALQPLKIPAFSFAW 2036


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