BLASTX nr result
ID: Panax21_contig00002465
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00002465 (1319 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi... 84 9e-20 ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi... 84 9e-20 ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra... 84 1e-19 ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su... 81 2e-19 ref|XP_002889337.1| hypothetical protein ARALYDRAFT_887229 [Arab... 80 4e-19 >ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula] gi|355520704|gb|AET01158.1| CCR4-NOT transcription complex subunit [Medicago truncatula] Length = 2418 Score = 83.6 bits (205), Expect(2) = 9e-20 Identities = 38/53 (71%), Positives = 49/53 (92%) Frame = +1 Query: 1 VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159 ++AVTVRFI KD+EEK++SFNP +P+FRLFINWLLDL +LEPV+DGAN Q+L+ Sbjct: 1982 ILAVTVRFIVKDAEEKKVSFNP-RPFFRLFINWLLDLGSLEPVTDGANLQILT 2033 Score = 40.8 bits (94), Expect(2) = 9e-20 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +2 Query: 251 VLMALANSFHAMQPLKVPAFSLVW 322 +L A AN+FHA+QPLKVP FS W Sbjct: 2031 ILTAFANAFHALQPLKVPGFSFAW 2054 >ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula] gi|355520705|gb|AET01159.1| CCR4-NOT transcription complex subunit [Medicago truncatula] Length = 2410 Score = 83.6 bits (205), Expect(2) = 9e-20 Identities = 38/53 (71%), Positives = 49/53 (92%) Frame = +1 Query: 1 VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159 ++AVTVRFI KD+EEK++SFNP +P+FRLFINWLLDL +LEPV+DGAN Q+L+ Sbjct: 1982 ILAVTVRFIVKDAEEKKVSFNP-RPFFRLFINWLLDLGSLEPVTDGANLQILT 2033 Score = 40.8 bits (94), Expect(2) = 9e-20 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +2 Query: 251 VLMALANSFHAMQPLKVPAFSLVW 322 +L A AN+FHA+QPLKVP FS W Sbjct: 2031 ILTAFANAFHALQPLKVPGFSFAW 2054 >ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like [Cucumis sativus] Length = 2427 Score = 84.3 bits (207), Expect(2) = 1e-19 Identities = 39/53 (73%), Positives = 48/53 (90%) Frame = +1 Query: 1 VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159 ++AVTVRFIQKD+EEK+ SFNP +PYFRLFINWL DL +LEP+ DGANFQ+L+ Sbjct: 2001 ILAVTVRFIQKDAEEKKGSFNP-RPYFRLFINWLPDLGSLEPIVDGANFQILT 2052 Score = 39.7 bits (91), Expect(2) = 1e-19 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +2 Query: 251 VLMALANSFHAMQPLKVPAFSLVW 322 +L A AN+FHA+ PLK+PAFS W Sbjct: 2050 ILTAFANAFHALHPLKIPAFSYAW 2073 >ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine max] Length = 2424 Score = 80.9 bits (198), Expect(2) = 2e-19 Identities = 38/53 (71%), Positives = 47/53 (88%) Frame = +1 Query: 1 VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159 ++AVTVRFI KD+EEK+ SFNP +P FRLFINWLLDL +LEPV+DGAN Q+L+ Sbjct: 2003 ILAVTVRFIIKDAEEKKASFNP-RPLFRLFINWLLDLGSLEPVTDGANLQILT 2054 Score = 42.4 bits (98), Expect(2) = 2e-19 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +2 Query: 251 VLMALANSFHAMQPLKVPAFSLVW 322 +L A AN+FHA+QPLKVPAFS W Sbjct: 2052 ILTAFANAFHALQPLKVPAFSFAW 2075 >ref|XP_002889337.1| hypothetical protein ARALYDRAFT_887229 [Arabidopsis lyrata subsp. lyrata] gi|297335179|gb|EFH65596.1| hypothetical protein ARALYDRAFT_887229 [Arabidopsis lyrata subsp. lyrata] Length = 2379 Score = 79.7 bits (195), Expect(2) = 4e-19 Identities = 37/53 (69%), Positives = 46/53 (86%) Frame = +1 Query: 1 VIAVTVRFIQKDSEEKRMSFNPCKPYFRLFINWLLDLATLEPVSDGANFQVLS 159 ++A TVRFI KD+E+K+ S NP KPYFRLFINWLLDL +L+P +DGANFQVL+ Sbjct: 1964 IMAATVRFIHKDAEDKKTSLNP-KPYFRLFINWLLDLCSLDPGTDGANFQVLT 2015 Score = 42.4 bits (98), Expect(2) = 4e-19 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +2 Query: 251 VLMALANSFHAMQPLKVPAFSLVW 322 VL A AN+FHA+QPLK+PAFS W Sbjct: 2013 VLTAFANAFHALQPLKIPAFSFAW 2036