BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002460
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   352   4e-95
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              352   4e-95
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      346   2e-93
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      337   1e-90
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   333   3e-89

>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
           vinifera]
          Length = 497

 Score =  352 bits (903), Expect = 4e-95
 Identities = 173/190 (91%), Positives = 183/190 (96%)
 Frame = +3

Query: 3   GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAK 182
           GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERLSLIRNAK
Sbjct: 287 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAK 346

Query: 183 AKLRERGITPSIAKIAECLTMSQKKVKNATEAISRVYSLDREAFPSLNGLPGETLHSYIA 362
            +L E+GITPSI +IAECL MSQKKV+NATEAIS+V+SLDREAFPSLNGLPGETLHSYIA
Sbjct: 347 IRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 406

Query: 363 DNRLENNPWHGVDEWALKDEVNKLMSTTLREREIDIIRLYYGLDNECLTWEDISRRIGLS 542
           D RLENNPWHGVDEWALKDEVNKL++TTL ERE DIIRLYYGLDNECLTWEDIS+RIGLS
Sbjct: 407 DVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLS 466

Query: 543 RERVRQVGLV 572
           RERVRQVGLV
Sbjct: 467 RERVRQVGLV 476


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  352 bits (903), Expect = 4e-95
 Identities = 173/190 (91%), Positives = 183/190 (96%)
 Frame = +3

Query: 3   GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAK 182
           GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERLSLIRNAK
Sbjct: 345 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAK 404

Query: 183 AKLRERGITPSIAKIAECLTMSQKKVKNATEAISRVYSLDREAFPSLNGLPGETLHSYIA 362
            +L E+GITPSI +IAECL MSQKKV+NATEAIS+V+SLDREAFPSLNGLPGETLHSYIA
Sbjct: 405 IRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIA 464

Query: 363 DNRLENNPWHGVDEWALKDEVNKLMSTTLREREIDIIRLYYGLDNECLTWEDISRRIGLS 542
           D RLENNPWHGVDEWALKDEVNKL++TTL ERE DIIRLYYGLDNECLTWEDIS+RIGLS
Sbjct: 465 DVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLS 524

Query: 543 RERVRQVGLV 572
           RERVRQVGLV
Sbjct: 525 RERVRQVGLV 534


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  346 bits (888), Expect = 2e-93
 Identities = 170/190 (89%), Positives = 179/190 (94%)
 Frame = +3

Query: 3   GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAK 182
           GLIGLLRGIEKFD S+GFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLSLIRNAK
Sbjct: 292 GLIGLLRGIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAK 351

Query: 183 AKLRERGITPSIAKIAECLTMSQKKVKNATEAISRVYSLDREAFPSLNGLPGETLHSYIA 362
            KL+E GITPSI KIAECL MSQKKV+NATEA S+V+SLDREAFPSLNGLPGETLHSYIA
Sbjct: 352 IKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIA 411

Query: 363 DNRLENNPWHGVDEWALKDEVNKLMSTTLREREIDIIRLYYGLDNECLTWEDISRRIGLS 542
           DNRLEN PWHGVDEW LKDEVN L+S+TLRERE +I+RLYYGLDNECLTWEDISRRIGLS
Sbjct: 412 DNRLENIPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRRIGLS 471

Query: 543 RERVRQVGLV 572
           RERVRQVGLV
Sbjct: 472 RERVRQVGLV 481


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  337 bits (865), Expect = 1e-90
 Identities = 165/190 (86%), Positives = 178/190 (93%)
 Frame = +3

Query: 3   GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAK 182
           GLIGLLRGIEKFD SKG+KISTYVYWWIRQGVSRALVENSRTLRLPT+LHERLSLIRNAK
Sbjct: 298 GLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAK 357

Query: 183 AKLRERGITPSIAKIAECLTMSQKKVKNATEAISRVYSLDREAFPSLNGLPGETLHSYIA 362
           A+L E+GITPS+  IA  L MSQKKV+NATEA S++YSLDREAFPSLNGLPGETLHSYIA
Sbjct: 358 ARLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIA 417

Query: 363 DNRLENNPWHGVDEWALKDEVNKLMSTTLREREIDIIRLYYGLDNECLTWEDISRRIGLS 542
           DN LENNPWHGVD WALKDEVN L+S+TLR+RE +IIRLYYGLDNECLTWEDIS+RIGLS
Sbjct: 418 DNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLS 477

Query: 543 RERVRQVGLV 572
           RERVRQVGLV
Sbjct: 478 RERVRQVGLV 487


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  333 bits (853), Expect = 3e-89
 Identities = 162/190 (85%), Positives = 178/190 (93%)
 Frame = +3

Query: 3   GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAK 182
           GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLP HLHERL LIRNAK
Sbjct: 298 GLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAK 357

Query: 183 AKLRERGITPSIAKIAECLTMSQKKVKNATEAISRVYSLDREAFPSLNGLPGETLHSYIA 362
            +L E+G+TPSI +IAE L +SQKKV+NATEA+S+V+SLDREAFPSLNGLPGET HSYIA
Sbjct: 358 IRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIA 417

Query: 363 DNRLENNPWHGVDEWALKDEVNKLMSTTLREREIDIIRLYYGLDNECLTWEDISRRIGLS 542
           DN LENNPWHGVD+WALKDEVNKL++ TL+ERE +IIRLYYGLDNE LTWEDIS+RIGLS
Sbjct: 418 DNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLS 477

Query: 543 RERVRQVGLV 572
           RERVRQVGLV
Sbjct: 478 RERVRQVGLV 487