BLASTX nr result

ID: Panax21_contig00002452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002452
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514903.1| conserved hypothetical protein [Ricinus comm...   285   2e-75
ref|XP_002297845.1| f-box family protein [Populus trichocarpa] g...   285   4e-75
ref|XP_003538543.1| PREDICTED: F-box only protein 6-like [Glycin...   281   6e-74
ref|XP_003601765.1| F-box family protein [Medicago truncatula] g...   279   2e-73
ref|XP_003551172.1| PREDICTED: F-box only protein 6-like [Glycin...   279   2e-73

>ref|XP_002514903.1| conserved hypothetical protein [Ricinus communis]
           gi|223545954|gb|EEF47457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 470

 Score =  285 bits (730), Expect = 2e-75
 Identities = 130/176 (73%), Positives = 154/176 (87%)
 Frame = -1

Query: 530 DDCCSLMMGNGKKPGNFKMLEPGKPPLTKKARRDRNRAKLIGTSNPTEVMEQQIWKDFPE 351
           DD C L+M  GK  G  KMLEP KPP +KK++++RNR KL+GT+N TEVME++IWKDFPE
Sbjct: 68  DDYCDLVMAAGKS-GRCKMLEPSKPPPSKKSKKERNRGKLLGTTNTTEVMEEEIWKDFPE 126

Query: 350 DLFEAVIARLPVATFFGFRSVCRKWDSLLTSQSFSWQCAQVTQVQPWFYTITHENVNTGA 171
           DLFEAVIARLP+ATFF FR+VCRKW+SLL+S+SFS  C +V Q  PWFYTITHENVN+GA
Sbjct: 127 DLFEAVIARLPIATFFRFRTVCRKWNSLLSSESFSQHCTKVLQANPWFYTITHENVNSGA 186

Query: 170 MYDPTLKKWHHPTVPALPTKSTVLPVASAGGLVCFLDIGHRSFYVCNPLTRSFKEL 3
           +YDP+LKKWHHPT+ +LPTK  VLPVASAGGLVCF+DIGHR+FYVCNPLT+SFKEL
Sbjct: 187 IYDPSLKKWHHPTISSLPTKMIVLPVASAGGLVCFIDIGHRNFYVCNPLTQSFKEL 242


>ref|XP_002297845.1| f-box family protein [Populus trichocarpa]
           gi|222845103|gb|EEE82650.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score =  285 bits (728), Expect = 4e-75
 Identities = 133/176 (75%), Positives = 152/176 (86%)
 Frame = -1

Query: 530 DDCCSLMMGNGKKPGNFKMLEPGKPPLTKKARRDRNRAKLIGTSNPTEVMEQQIWKDFPE 351
           DD CSL+M  GK  G+FKMLEP KPP +KK R++RNR K +GT++ TEVM+Q+IWK+FPE
Sbjct: 79  DDYCSLVMAAGKS-GSFKMLEPCKPPPSKKPRKERNRGKSLGTTSSTEVMQQEIWKEFPE 137

Query: 350 DLFEAVIARLPVATFFGFRSVCRKWDSLLTSQSFSWQCAQVTQVQPWFYTITHENVNTGA 171
           DLFEAVIARLP+ TFF FRSVCRKW+S L SQSFS  CAQV Q  PWFYTI HENVN+GA
Sbjct: 138 DLFEAVIARLPITTFFRFRSVCRKWNSFLDSQSFSQHCAQVPQSNPWFYTIAHENVNSGA 197

Query: 170 MYDPTLKKWHHPTVPALPTKSTVLPVASAGGLVCFLDIGHRSFYVCNPLTRSFKEL 3
           MYDP+LKKWHHPT+  LPTK+ VLPVASAGGLVCFLDIGHR+FYVCNPLT+SFKEL
Sbjct: 198 MYDPSLKKWHHPTISYLPTKTIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKEL 253


>ref|XP_003538543.1| PREDICTED: F-box only protein 6-like [Glycine max]
          Length = 450

 Score =  281 bits (718), Expect = 6e-74
 Identities = 132/176 (75%), Positives = 150/176 (85%)
 Frame = -1

Query: 530 DDCCSLMMGNGKKPGNFKMLEPGKPPLTKKARRDRNRAKLIGTSNPTEVMEQQIWKDFPE 351
           DD C L+M  GK  G+F+M EPGKPP TKK+RRDR+R K  G S  TEVMEQ+IWKDFPE
Sbjct: 48  DDFCGLVMTAGKS-GSFRMSEPGKPPPTKKSRRDRSRGKSSGRSCTTEVMEQEIWKDFPE 106

Query: 350 DLFEAVIARLPVATFFGFRSVCRKWDSLLTSQSFSWQCAQVTQVQPWFYTITHENVNTGA 171
           DLFEAVIARLP++TFF FRSVCR+W+S+L SQSFS  C QVTQ  PWFYTITHENVN+GA
Sbjct: 107 DLFEAVIARLPISTFFRFRSVCRQWNSMLNSQSFSQHCTQVTQENPWFYTITHENVNSGA 166

Query: 170 MYDPTLKKWHHPTVPALPTKSTVLPVASAGGLVCFLDIGHRSFYVCNPLTRSFKEL 3
           MYDP+LKKWHHPT+   PTK  VLPVAS+GGLVCFLDIGHR+F+VCNPLT+SFKEL
Sbjct: 167 MYDPSLKKWHHPTISTPPTKLIVLPVASSGGLVCFLDIGHRNFFVCNPLTQSFKEL 222


>ref|XP_003601765.1| F-box family protein [Medicago truncatula]
           gi|355490813|gb|AES72016.1| F-box family protein
           [Medicago truncatula]
          Length = 465

 Score =  279 bits (714), Expect = 2e-73
 Identities = 132/176 (75%), Positives = 149/176 (84%)
 Frame = -1

Query: 530 DDCCSLMMGNGKKPGNFKMLEPGKPPLTKKARRDRNRAKLIGTSNPTEVMEQQIWKDFPE 351
           DDCC L+M  GK   +F+M EP KPP  KK RRDR+R K  G S+ +EVMEQ+IWKDFPE
Sbjct: 63  DDCCGLVMAAGKSH-SFRMSEPLKPPPAKKPRRDRSRGKSSGRSSTSEVMEQEIWKDFPE 121

Query: 350 DLFEAVIARLPVATFFGFRSVCRKWDSLLTSQSFSWQCAQVTQVQPWFYTITHENVNTGA 171
           DLFEAVIARLP+A FF FRSVCR+W+SLL SQSFS QCA+V Q  PWFYTITHENVN+GA
Sbjct: 122 DLFEAVIARLPIAAFFRFRSVCRQWNSLLASQSFSKQCAEVPQENPWFYTITHENVNSGA 181

Query: 170 MYDPTLKKWHHPTVPALPTKSTVLPVASAGGLVCFLDIGHRSFYVCNPLTRSFKEL 3
           MYDP+LKKWHHP++  LPTK  VLPVASAGGLVCFLDIGHR+FYVCNPLT+SFKEL
Sbjct: 182 MYDPSLKKWHHPSISPLPTKLIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKEL 237


>ref|XP_003551172.1| PREDICTED: F-box only protein 6-like [Glycine max]
          Length = 462

 Score =  279 bits (713), Expect = 2e-73
 Identities = 131/176 (74%), Positives = 150/176 (85%)
 Frame = -1

Query: 530 DDCCSLMMGNGKKPGNFKMLEPGKPPLTKKARRDRNRAKLIGTSNPTEVMEQQIWKDFPE 351
           DD C L+M   +K G+F+M +P KPP +KK+RRDR+R K  G S  TEVMEQ+IWKDFPE
Sbjct: 60  DDLCGLVM-TARKSGSFRMSDPVKPPPSKKSRRDRSRGKSSGRSCTTEVMEQEIWKDFPE 118

Query: 350 DLFEAVIARLPVATFFGFRSVCRKWDSLLTSQSFSWQCAQVTQVQPWFYTITHENVNTGA 171
           DLFEAVIARLP+ATFF FRSVCR+W+S+LTSQSFS  C QVTQ  PWFYTITHENVN+GA
Sbjct: 119 DLFEAVIARLPIATFFRFRSVCRQWNSMLTSQSFSLHCTQVTQESPWFYTITHENVNSGA 178

Query: 170 MYDPTLKKWHHPTVPALPTKSTVLPVASAGGLVCFLDIGHRSFYVCNPLTRSFKEL 3
           MYDP+LKKWHHPT+   PTK  VLPVASAGGLVCFLDIGHR+F+VCNPLT+SFKEL
Sbjct: 179 MYDPSLKKWHHPTISTPPTKLIVLPVASAGGLVCFLDIGHRNFFVCNPLTQSFKEL 234


Top