BLASTX nr result

ID: Panax21_contig00002429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002429
         (1928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   337   5e-90
emb|CBI33027.3| unnamed protein product [Vitis vinifera]              337   5e-90
emb|CAN68406.1| hypothetical protein VITISV_035043 [Vitis vinifera]   319   1e-87
ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   325   3e-86
ref|XP_002298917.1| predicted protein [Populus trichocarpa] gi|2...   325   3e-86

>ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Vitis
            vinifera]
          Length = 906

 Score =  337 bits (865), Expect = 5e-90
 Identities = 160/193 (82%), Positives = 173/193 (89%)
 Frame = -1

Query: 1928 ERAEVTSSKHKKIKMLFPYEEFVKFFQSDFFNLPPRGFVNCGNSCYANAVLQCLTCTKPL 1749
            + +E +S  HKKIKMLFPYEEFV+FFQ + FN+ PRG +NCGNSCYANAVLQCLTCTKPL
Sbjct: 344  DASEESSDIHKKIKMLFPYEEFVRFFQCEVFNISPRGLLNCGNSCYANAVLQCLTCTKPL 403

Query: 1748 TIFLLRRSHSRACCTKDWCLMCELEQHVTMLTESGGPLSPSRILSHMRSINCQIGDGSQE 1569
             I+LL+RSHSR CC  +WCLMCELE+HV ML ESGGPLSPSRILSHMRSINCQIGDGSQE
Sbjct: 404  IIYLLQRSHSRTCCVTNWCLMCELEKHVMMLRESGGPLSPSRILSHMRSINCQIGDGSQE 463

Query: 1568 DAHEFLRFLITSMQSICLEGLGGENVVDARLQETTFIQHTFGGRLRSKVKCLRCHHESER 1389
            DAHEFLR L+TSMQSICLE LGGE  VDARLQETTFIQHTFGGRLRSKVKCLRCH ESER
Sbjct: 464  DAHEFLRLLVTSMQSICLEKLGGEREVDARLQETTFIQHTFGGRLRSKVKCLRCHLESER 523

Query: 1388 CESIMDLTLEIFG 1350
             E+IMDLTLEIFG
Sbjct: 524  YENIMDLTLEIFG 536



 Score =  320 bits (819), Expect(2) = 1e-87
 Identities = 175/299 (58%), Positives = 202/299 (67%)
 Frame = -2

Query: 1213 CGRCAAYVRARKQLCIQEAPNILTIVLKRFQEGSYGKINKCITFPEMLDMVPFMTGTDDI 1034
            C RC  YVRARKQL I EAPNILTIVLKRFQEG YGKINKCITFP+MLDM+PFMTGT D+
Sbjct: 562  CRRCTTYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMIPFMTGTYDV 621

Query: 1033 PPLYILYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTXXXXXXXXXXXSEGAYILF 854
            PPLY+LYAVVVH+DTLNASFSGHYVAYVKDLQG+WFR+DD            SEGAYILF
Sbjct: 622  PPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVMSEGAYILF 681

Query: 853  YMRSCPRPARAYTEKPIQHQASGFPKHWXXXXXXXXXXXXXXXXGHFVNSEHSIDHKPET 674
            YMRS PRP RA+  K IQ QA    KH                 G FV  E S   +  +
Sbjct: 682  YMRSWPRPPRAFPVKAIQQQAPASAKH---CSSKTHKSSRSKPRGDFVGLEPSNPKREVS 738

Query: 673  PMCFTTNHPSNGIFSSSNSNRPPFVESHAKSTNMEFSDATSSDWSIFTSSDDASFTTEST 494
            P    ++  SNGI  +  +    +VE      + EFSDA SSDWS+FTSSD+ASFTTEST
Sbjct: 739  P--GFSSATSNGILRNGRNGSRTYVE----PISQEFSDAPSSDWSLFTSSDEASFTTEST 792

Query: 493  RDSFSTVDYADAGNTDPISSIFNSFYTPVYSSSHKTVTCSRFYSSKPQIGFVSEENGCV 317
            RDSFSTVDYA+  N DPISSIFN+ Y P Y+S +  V+C    + K +  +V E+ G V
Sbjct: 793  RDSFSTVDYAETCNVDPISSIFNTSYMPEYASGN-AVSCRMLSNGKLETRYVQEKKGYV 850



 Score = 32.3 bits (72), Expect(2) = 1e-87
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = -3

Query: 333 KRMVVWDSFLPTQHFNRLQKGENQKQVSVSS 241
           K+  V DS+LPTQ  ++  KGEN KQVSVS+
Sbjct: 846 KKGYVLDSYLPTQP-DKAWKGENLKQVSVST 875


>emb|CBI33027.3| unnamed protein product [Vitis vinifera]
          Length = 894

 Score =  337 bits (865), Expect = 5e-90
 Identities = 160/193 (82%), Positives = 173/193 (89%)
 Frame = -1

Query: 1928 ERAEVTSSKHKKIKMLFPYEEFVKFFQSDFFNLPPRGFVNCGNSCYANAVLQCLTCTKPL 1749
            + +E +S  HKKIKMLFPYEEFV+FFQ + FN+ PRG +NCGNSCYANAVLQCLTCTKPL
Sbjct: 373  DASEESSDIHKKIKMLFPYEEFVRFFQCEVFNISPRGLLNCGNSCYANAVLQCLTCTKPL 432

Query: 1748 TIFLLRRSHSRACCTKDWCLMCELEQHVTMLTESGGPLSPSRILSHMRSINCQIGDGSQE 1569
             I+LL+RSHSR CC  +WCLMCELE+HV ML ESGGPLSPSRILSHMRSINCQIGDGSQE
Sbjct: 433  IIYLLQRSHSRTCCVTNWCLMCELEKHVMMLRESGGPLSPSRILSHMRSINCQIGDGSQE 492

Query: 1568 DAHEFLRFLITSMQSICLEGLGGENVVDARLQETTFIQHTFGGRLRSKVKCLRCHHESER 1389
            DAHEFLR L+TSMQSICLE LGGE  VDARLQETTFIQHTFGGRLRSKVKCLRCH ESER
Sbjct: 493  DAHEFLRLLVTSMQSICLEKLGGEREVDARLQETTFIQHTFGGRLRSKVKCLRCHLESER 552

Query: 1388 CESIMDLTLEIFG 1350
             E+IMDLTLEIFG
Sbjct: 553  YENIMDLTLEIFG 565



 Score =  306 bits (783), Expect(2) = 2e-83
 Identities = 169/299 (56%), Positives = 190/299 (63%)
 Frame = -2

Query: 1213 CGRCAAYVRARKQLCIQEAPNILTIVLKRFQEGSYGKINKCITFPEMLDMVPFMTGTDDI 1034
            C RC  YVRARKQL I EAPNILTIVLKRFQEG YGKINKCITFP+MLDM+PFMTGT D+
Sbjct: 591  CRRCTTYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMIPFMTGTYDV 650

Query: 1033 PPLYILYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTXXXXXXXXXXXSEGAYILF 854
            PPLY+LYAVVVH+DTLNASFSGHYVAYVKDLQG+WFR+DD            SEGAYILF
Sbjct: 651  PPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVMSEGAYILF 710

Query: 853  YMRSCPRPARAYTEKPIQHQASGFPKHWXXXXXXXXXXXXXXXXGHFVNSEHSIDHKPET 674
            YMRS PRP RA+  K IQ QA    KH                                 
Sbjct: 711  YMRSWPRPPRAFPVKAIQQQAPASAKH--------------------------------- 737

Query: 673  PMCFTTNHPSNGIFSSSNSNRPPFVESHAKSTNMEFSDATSSDWSIFTSSDDASFTTEST 494
              C +  H      SS +  R  F          EFSDA SSDWS+FTSSD+ASFTTEST
Sbjct: 738  --CSSKTHK-----SSRSKPRGDF----------EFSDAPSSDWSLFTSSDEASFTTEST 780

Query: 493  RDSFSTVDYADAGNTDPISSIFNSFYTPVYSSSHKTVTCSRFYSSKPQIGFVSEENGCV 317
            RDSFSTVDYA+  N DPISSIFN+ Y P Y+S +  V+C    + K +  +V E+ G V
Sbjct: 781  RDSFSTVDYAETCNVDPISSIFNTSYMPEYASGN-AVSCRMLSNGKLETRYVQEKKGYV 838



 Score = 32.3 bits (72), Expect(2) = 2e-83
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = -3

Query: 333 KRMVVWDSFLPTQHFNRLQKGENQKQVSVSS 241
           K+  V DS+LPTQ  ++  KGEN KQVSVS+
Sbjct: 834 KKGYVLDSYLPTQP-DKAWKGENLKQVSVST 863


>emb|CAN68406.1| hypothetical protein VITISV_035043 [Vitis vinifera]
          Length = 945

 Score =  319 bits (818), Expect(2) = 1e-87
 Identities = 175/299 (58%), Positives = 201/299 (67%)
 Frame = -2

Query: 1213 CGRCAAYVRARKQLCIQEAPNILTIVLKRFQEGSYGKINKCITFPEMLDMVPFMTGTDDI 1034
            C RC  YVRARKQL I EAPNILTIVLKRFQEG YGKINKCITFP+MLDM+PFMTGT D+
Sbjct: 601  CRRCTTYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMIPFMTGTYDV 660

Query: 1033 PPLYILYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTXXXXXXXXXXXSEGAYILF 854
            PPLY+LYAVVVH+DTLNASFSGHYVAYVKDLQG+WFR+DD            SEGAYILF
Sbjct: 661  PPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVMSEGAYILF 720

Query: 853  YMRSCPRPARAYTEKPIQHQASGFPKHWXXXXXXXXXXXXXXXXGHFVNSEHSIDHKPET 674
            YMRS PRP RA+  K IQ QA    KH                 G FV  E S   +   
Sbjct: 721  YMRSWPRPPRAFPVKAIQQQAPASAKH---CSSKTHKSSRSKPRGDFVGLEPSNPKREVA 777

Query: 673  PMCFTTNHPSNGIFSSSNSNRPPFVESHAKSTNMEFSDATSSDWSIFTSSDDASFTTEST 494
            P    ++  SNGI  +  +    +VE      + EFSDA SSDWS+FTSSD+ASFTTEST
Sbjct: 778  P--GFSSATSNGILRNGRNGSRTYVE----PISQEFSDAPSSDWSLFTSSDEASFTTEST 831

Query: 493  RDSFSTVDYADAGNTDPISSIFNSFYTPVYSSSHKTVTCSRFYSSKPQIGFVSEENGCV 317
            RDSFSTVDYA+  N DPISSIFN+ Y P Y+S +  V+C    + K +  +V E+ G V
Sbjct: 832  RDSFSTVDYAETCNVDPISSIFNTSYMPEYASGN-AVSCRMLSNGKLETRYVQEKKGYV 889



 Score = 32.3 bits (72), Expect(2) = 1e-87
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = -3

Query: 333 KRMVVWDSFLPTQHFNRLQKGENQKQVSVSS 241
           K+  V DS+LPTQ  ++  KGEN KQVSVS+
Sbjct: 885 KKGYVLDSYLPTQP-DKAWKGENLKQVSVST 914



 Score =  268 bits (685), Expect = 4e-69
 Identities = 138/196 (70%), Positives = 152/196 (77%), Gaps = 3/196 (1%)
 Frame = -1

Query: 1928 ERAEVTSSKHKKIKMLFPYEEFVKFFQSDFFNLPPRGFVNCGNSCYANAVLQCLTCTKPL 1749
            + +E +S  HKKIKMLFPYEEFV+FFQ + FN+ PRG +NCGN C  + +L         
Sbjct: 395  DASEESSDIHKKIKMLFPYEEFVRFFQCEVFNISPRGLLNCGNRCLRDYLL--------F 446

Query: 1748 TIFLLRRSHSRACCTKDWCLMCELEQHVTMLTESGGPLSPSRILSHMRSINCQIGDGSQE 1569
             I +L        C  +WCLMCELE+HV ML ESGGPLSPSRILSHMRSINCQIGDGSQE
Sbjct: 447  VICMLG-------CVTNWCLMCELEKHVMMLRESGGPLSPSRILSHMRSINCQIGDGSQE 499

Query: 1568 DAHEFLRFLITSMQSICLEGLGGENVVDARLQETTFIQHTFGGRLRSK---VKCLRCHHE 1398
            DAHEFLR L+TSMQSICLE LGGE  VDARLQETTFIQHTFGGRLRSK   VKCLRCH E
Sbjct: 500  DAHEFLRLLVTSMQSICLEKLGGEREVDARLQETTFIQHTFGGRLRSKCNQVKCLRCHLE 559

Query: 1397 SERCESIMDLTLEIFG 1350
            SER E+IMDLTLEIFG
Sbjct: 560  SERYENIMDLTLEIFG 575


>ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
            max]
          Length = 990

 Score =  325 bits (832), Expect = 3e-86
 Identities = 174/271 (64%), Positives = 193/271 (71%), Gaps = 3/271 (1%)
 Frame = -2

Query: 1213 CGRCAAYVRARKQLCIQEAPNILTIVLKRFQEGSYGKINKCITFPEMLDMVPFMTGTDDI 1034
            CGRC +YVRARKQL I EAPNILTIVLKRFQEG YGKINKCITFPEMLDM+PFMTGT DI
Sbjct: 654  CGRCTSYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFMTGTGDI 713

Query: 1033 PPLYILYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTXXXXXXXXXXXSEGAYILF 854
            PPLY+LYAVVVHLDTLNASFSGHYV+YVKDLQG+WFRIDD            SEGAYILF
Sbjct: 714  PPLYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDIEVQPVLVNQVMSEGAYILF 773

Query: 853  YMRSCPRPARAYTEKPIQHQASGFPKHWXXXXXXXXXXXXXXXXGH-FVNSEHSIDHKPE 677
            YMRSCPRP   +T K +Q       KH                  H F  SE S + +PE
Sbjct: 774  YMRSCPRPPVEHTVKAVQQSVYDSSKHNPMEMQKPNKPGHSRHGSHQFFVSESSPNARPE 833

Query: 676  --TPMCFTTNHPSNGIFSSSNSNRPPFVESHAKSTNMEFSDATSSDWSIFTSSDDASFTT 503
              T +  TTN     +  S+N N  P  +++AK+   EFSD TSSDWS+FTSSD+ASFTT
Sbjct: 834  ISTHIIDTTN---GFLRKSTNRNALPVTQTYAKNVRSEFSDTTSSDWSLFTSSDEASFTT 890

Query: 502  ESTRDSFSTVDYADAGNTDPISSIFNSFYTP 410
            ESTRDSFSTVDY D+GN DPISSIFN  YTP
Sbjct: 891  ESTRDSFSTVDYGDSGNMDPISSIFN--YTP 919



 Score =  312 bits (800), Expect = 2e-82
 Identities = 147/193 (76%), Positives = 165/193 (85%)
 Frame = -1

Query: 1928 ERAEVTSSKHKKIKMLFPYEEFVKFFQSDFFNLPPRGFVNCGNSCYANAVLQCLTCTKPL 1749
            E  +V   K KKIKMLFPY+EFVK FQSD F + PRG +NCGNSCYANAVLQCLT TKPL
Sbjct: 436  ESMDVKCKKVKKIKMLFPYDEFVKIFQSDVFGIYPRGLLNCGNSCYANAVLQCLTSTKPL 495

Query: 1748 TIFLLRRSHSRACCTKDWCLMCELEQHVTMLTESGGPLSPSRILSHMRSINCQIGDGSQE 1569
             ++LL RSHS+ACC KDWCLMCELE+H+ +L E+G PLSPSRIL HMRSINC +G+G+QE
Sbjct: 496  VVYLLYRSHSKACCAKDWCLMCELEKHIMVLRENGDPLSPSRILWHMRSINCHMGEGNQE 555

Query: 1568 DAHEFLRFLITSMQSICLEGLGGENVVDARLQETTFIQHTFGGRLRSKVKCLRCHHESER 1389
            DAHEFLR LI SMQSICLE LGGE  VD RLQETTFIQHTFGGRL+SKVKCL+C+HESER
Sbjct: 556  DAHEFLRLLIASMQSICLEALGGEKKVDPRLQETTFIQHTFGGRLQSKVKCLKCNHESER 615

Query: 1388 CESIMDLTLEIFG 1350
             E+IMDLTLEI G
Sbjct: 616  YENIMDLTLEILG 628


>ref|XP_002298917.1| predicted protein [Populus trichocarpa] gi|222846175|gb|EEE83722.1|
            predicted protein [Populus trichocarpa]
          Length = 665

 Score =  325 bits (832), Expect = 3e-86
 Identities = 156/182 (85%), Positives = 160/182 (87%)
 Frame = -1

Query: 1895 KIKMLFPYEEFVKFFQSDFFNLPPRGFVNCGNSCYANAVLQCLTCTKPLTIFLLRRSHSR 1716
            +I MLFPYEEFVK F  +  NL PRG VNCGNSCYANAVLQCLTCTKPL IFLLRRSHSR
Sbjct: 327  EINMLFPYEEFVKIFNCEVINLTPRGLVNCGNSCYANAVLQCLTCTKPLIIFLLRRSHSR 386

Query: 1715 ACCTKDWCLMCELEQHVTMLTESGGPLSPSRILSHMRSINCQIGDGSQEDAHEFLRFLIT 1536
            ACC KDWCLMCELEQHV ML E GGPLSPSRIL HMR INCQIGDGSQEDAHEFLR LI 
Sbjct: 387  ACCGKDWCLMCELEQHVMMLRECGGPLSPSRILLHMRKINCQIGDGSQEDAHEFLRLLIA 446

Query: 1535 SMQSICLEGLGGENVVDARLQETTFIQHTFGGRLRSKVKCLRCHHESERCESIMDLTLEI 1356
            SMQSICLE LGGE+ VD RLQETTFIQHTFGG LRSKVKCLRCHHESER E+IMDLTLEI
Sbjct: 447  SMQSICLERLGGEDKVDPRLQETTFIQHTFGGLLRSKVKCLRCHHESERYENIMDLTLEI 506

Query: 1355 FG 1350
            FG
Sbjct: 507  FG 508



 Score =  217 bits (553), Expect = 8e-54
 Identities = 103/130 (79%), Positives = 110/130 (84%)
 Frame = -2

Query: 1213 CGRCAAYVRARKQLCIQEAPNILTIVLKRFQEGSYGKINKCITFPEMLDMVPFMTGTDDI 1034
            CGRCAAYVRARKQL I EAPNILTIVLKRFQEG YGKINKCITFP+MLDM+PFMTG  D+
Sbjct: 534  CGRCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYGKINKCITFPDMLDMIPFMTGMGDV 593

Query: 1033 PPLYILYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTXXXXXXXXXXXSEGAYILF 854
            PPLY+LYAVVVHLDTLNASFSGHYVAYVKDL+GSWF+IDDT            EGAYILF
Sbjct: 594  PPLYMLYAVVVHLDTLNASFSGHYVAYVKDLRGSWFKIDDTEVHPVSMSQVMLEGAYILF 653

Query: 853  YMRSCPRPAR 824
            Y RSC RP +
Sbjct: 654  YKRSCTRPQK 663


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