BLASTX nr result
ID: Panax21_contig00002418
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00002418 (925 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera] 274 2e-71 ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma... 274 2e-71 emb|CBI35690.3| unnamed protein product [Vitis vinifera] 274 2e-71 ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma... 261 2e-67 ref|XP_002519032.1| double-stranded RNA binding protein, putativ... 249 6e-64 >emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera] Length = 894 Score = 274 bits (701), Expect = 2e-71 Identities = 135/179 (75%), Positives = 158/179 (88%), Gaps = 1/179 (0%) Frame = +1 Query: 391 MYKSVVVYEGDKLLGEVEVYPQNQNGVVVEEIRISHFSPPSERCPPLAVLHTITSTGICF 570 MYKS+V YEGD ++GEVE+YPQNQ +++EIRISH+S PSERCPPLAVLHTITS G+CF Sbjct: 1 MYKSIV-YEGDDVVGEVEIYPQNQGLELMKEIRISHYSQPSERCPPLAVLHTITSCGVCF 59 Query: 571 KLES-KSQFLESQLNLLHSTCLRENKTAVMSLQGGELHLVAMLSRKNNGQCPCFWGFNVT 747 K+ES K+Q ++ L LLHSTC+RENKTAVMSL ELHLVAM S+K +GQ PCFWGFNV Sbjct: 60 KMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVA 119 Query: 748 SGLYNSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDRIEALQRKINSDSDPQRVSGML 924 GLY+SCLVMLNLRCLGIVFDLDETL+VANTMRSFEDRI+ALQRKIN++ DPQR+SGM+ Sbjct: 120 LGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGMV 178 >ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1 [Vitis vinifera] Length = 860 Score = 274 bits (700), Expect = 2e-71 Identities = 135/178 (75%), Positives = 157/178 (88%), Gaps = 1/178 (0%) Frame = +1 Query: 391 MYKSVVVYEGDKLLGEVEVYPQNQNGVVVEEIRISHFSPPSERCPPLAVLHTITSTGICF 570 MYKS+V YEGD ++GEVE+YPQNQ +++EIRISH+S PSERCPPLAVLHTITS G+CF Sbjct: 1 MYKSIV-YEGDDVVGEVEIYPQNQGLELMKEIRISHYSQPSERCPPLAVLHTITSCGVCF 59 Query: 571 KLES-KSQFLESQLNLLHSTCLRENKTAVMSLQGGELHLVAMLSRKNNGQCPCFWGFNVT 747 K+ES K+Q ++ L LLHSTC+RENKTAVMSL ELHLVAM S+K +GQ PCFWGFNV Sbjct: 60 KMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVA 119 Query: 748 SGLYNSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDRIEALQRKINSDSDPQRVSGM 921 GLY+SCLVMLNLRCLGIVFDLDETL+VANTMRSFEDRI+ALQRKIN++ DPQR+SGM Sbjct: 120 LGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGM 177 >emb|CBI35690.3| unnamed protein product [Vitis vinifera] Length = 788 Score = 274 bits (700), Expect = 2e-71 Identities = 135/178 (75%), Positives = 157/178 (88%), Gaps = 1/178 (0%) Frame = +1 Query: 391 MYKSVVVYEGDKLLGEVEVYPQNQNGVVVEEIRISHFSPPSERCPPLAVLHTITSTGICF 570 MYKS+V YEGD ++GEVE+YPQNQ +++EIRISH+S PSERCPPLAVLHTITS G+CF Sbjct: 1 MYKSIV-YEGDDVVGEVEIYPQNQGLELMKEIRISHYSQPSERCPPLAVLHTITSCGVCF 59 Query: 571 KLES-KSQFLESQLNLLHSTCLRENKTAVMSLQGGELHLVAMLSRKNNGQCPCFWGFNVT 747 K+ES K+Q ++ L LLHSTC+RENKTAVMSL ELHLVAM S+K +GQ PCFWGFNV Sbjct: 60 KMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVA 119 Query: 748 SGLYNSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDRIEALQRKINSDSDPQRVSGM 921 GLY+SCLVMLNLRCLGIVFDLDETL+VANTMRSFEDRI+ALQRKIN++ DPQR+SGM Sbjct: 120 LGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGM 177 >ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1-like [Cucumis sativus] gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 1-like [Cucumis sativus] Length = 803 Score = 261 bits (666), Expect = 2e-67 Identities = 133/182 (73%), Positives = 153/182 (84%), Gaps = 4/182 (2%) Frame = +1 Query: 391 MYKSVVVYEGDKLLGEVEVYPQNQNG---VVVEEIRISHFSPPSERCPPLAVLHTITSTG 561 MYKSVV Y GD+LLG+VE+YP+ +NG + V+EIRI+HFS PSERCPPLAVLHTI ++G Sbjct: 1 MYKSVV-YHGDELLGDVEIYPEEKNGYKNIEVKEIRITHFSQPSERCPPLAVLHTIAASG 59 Query: 562 ICFKLESK-SQFLESQLNLLHSTCLRENKTAVMSLQGGELHLVAMLSRKNNGQCPCFWGF 738 ICFK+ESK SQ ++ LNLLHS+C+ ENKTA+M ELHLVAM SR + Q PCFWGF Sbjct: 60 ICFKMESKTSQSQDTPLNLLHSSCIMENKTAIMMFGVEELHLVAMFSRDLDKQYPCFWGF 119 Query: 739 NVTSGLYNSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDRIEALQRKINSDSDPQRVSG 918 NV GLYNSCL MLNLRCLGIVFDLDETLVVANTMRSFEDRIEALQRKI+S+ DPQR +G Sbjct: 120 NVAMGLYNSCLDMLNLRCLGIVFDLDETLVVANTMRSFEDRIEALQRKISSEVDPQRANG 179 Query: 919 ML 924 ML Sbjct: 180 ML 181 >ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis] gi|223541695|gb|EEF43243.1| double-stranded RNA binding protein, putative [Ricinus communis] Length = 978 Score = 249 bits (636), Expect = 6e-64 Identities = 131/201 (65%), Positives = 157/201 (78%), Gaps = 23/201 (11%) Frame = +1 Query: 391 MYKSVVVYEGDKLLGEVEVYPQNQNGVVVEE---------------------IRISHFSP 507 MYKSVV Y+GD+LLGEVE+Y Q + + +E IRISHFS Sbjct: 1 MYKSVV-YKGDELLGEVEIYAQQEQKLQQQEELQEQEQELKKKRVIDEILKGIRISHFSQ 59 Query: 508 PSERCPPLAVLHTITSTGICFKLESKSQF-LESQLNLLHSTCLRENKTAVMSLQGGE-LH 681 SERCPPLAVLHTIT+ GICFK+ESK+ L++ L+LLHS+C++E+KTAV+ LQGGE LH Sbjct: 60 ASERCPPLAVLHTITTNGICFKMESKNSVSLDTPLHLLHSSCIQESKTAVVLLQGGEELH 119 Query: 682 LVAMLSRKNNGQCPCFWGFNVTSGLYNSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDR 861 LVAM SR + Q PCFW FN++SGLY+SCLVMLNLRCLGIVFDLDETL+VANTMRSFEDR Sbjct: 120 LVAMFSRNDERQYPCFWAFNISSGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDR 179 Query: 862 IEALQRKINSDSDPQRVSGML 924 IEALQRKI+++ DPQR+SGML Sbjct: 180 IEALQRKISTELDPQRISGML 200