BLASTX nr result

ID: Panax21_contig00002410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002410
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315159.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-25
gb|ABK94432.1| unknown [Populus trichocarpa]                          117   2e-24
gb|AAW22880.1| putative cyclophilin [Solanum lycopersicum]            116   7e-24
ref|XP_002273217.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   105   1e-20
ref|XP_002878051.1| hypothetical protein ARALYDRAFT_486034 [Arab...   100   5e-19

>ref|XP_002315159.1| predicted protein [Populus trichocarpa] gi|222864199|gb|EEF01330.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  120 bits (301), Expect = 3e-25
 Identities = 61/100 (61%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -3

Query: 709 MATGSKFFPVVVIWVLVLFGTLALILNRLSDFGDSSEREVIGVKLNDEVKLL-DGDSEGV 533
           M+T ++   + ++W+LVLFGTLA I NRLSD   SS+ +++  +L  E K   D D EGV
Sbjct: 1   MSTTTRLVSIALLWILVLFGTLAFIQNRLSDAAVSSDPKLVNNELGQENKSEGDLDLEGV 60

Query: 532 TNKVYFDVEIGGKPMGRIVMGLFGKTVPLTTENFRALCTG 413
           T++VYFDVEI GKPMGR+VMGLFGKTVP T ENFRALCTG
Sbjct: 61  THRVYFDVEIAGKPMGRVVMGLFGKTVPKTAENFRALCTG 100


>gb|ABK94432.1| unknown [Populus trichocarpa]
          Length = 231

 Score =  117 bits (294), Expect = 2e-24
 Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
 Frame = -3

Query: 709 MATGSKFFPVVVIWVLVLFGTLALILNRLSDFGDSSEREVIGVKLNDEVKLL-DGDSEGV 533
           M+T ++   + ++W+LVLFGTLA I NRLSD   SS+ +++  +L  E K   D D EGV
Sbjct: 1   MSTTTRLVSIALLWILVLFGTLAFIQNRLSDAAVSSDPKLVNNELGQENKSEGDLDLEGV 60

Query: 532 TNKVYFDVEIGGKPMGRIVMGLFGKTVPLTTENFRALCTG 413
           T++VYF VEI GKPMGR+VMGLFGKTVP T ENFRALCTG
Sbjct: 61  THRVYFGVEIAGKPMGRVVMGLFGKTVPKTAENFRALCTG 100


>gb|AAW22880.1| putative cyclophilin [Solanum lycopersicum]
          Length = 225

 Score =  116 bits (290), Expect = 7e-24
 Identities = 64/99 (64%), Positives = 71/99 (71%)
 Frame = -3

Query: 709 MATGSKFFPVVVIWVLVLFGTLALILNRLSDFGDSSEREVIGVKLNDEVKLLDGDSEGVT 530
           MA  +K  P +V+WVLVLFGTL  ILNRL D G SS+    G  +  E K  + D E VT
Sbjct: 1   MANRNKLSPSLVVWVLVLFGTLIFILNRLGDSGVSSD----GKDIKIEAKTSE-DLERVT 55

Query: 529 NKVYFDVEIGGKPMGRIVMGLFGKTVPLTTENFRALCTG 413
           +KVYFDVEI GKP GRIVMGLFGKTVP T ENFRALCTG
Sbjct: 56  HKVYFDVEINGKPTGRIVMGLFGKTVPKTAENFRALCTG 94


>ref|XP_002273217.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 isoform 2
           [Vitis vinifera] gi|297736608|emb|CBI25479.3| unnamed
           protein product [Vitis vinifera]
          Length = 228

 Score =  105 bits (262), Expect = 1e-20
 Identities = 57/99 (57%), Positives = 70/99 (70%)
 Frame = -3

Query: 709 MATGSKFFPVVVIWVLVLFGTLALILNRLSDFGDSSEREVIGVKLNDEVKLLDGDSEGVT 530
           MA   +   V VIW++VL GTLA+I ++LS    S E++ I   L  E K  + D +GVT
Sbjct: 1   MAATRRLIAVAVIWIMVLIGTLAIIQSQLSATV-SIEQKTINTTLEKESKSKE-DLDGVT 58

Query: 529 NKVYFDVEIGGKPMGRIVMGLFGKTVPLTTENFRALCTG 413
           +KVYFDVE+ GKP+GRI MGLFGKTVP T ENFRALCTG
Sbjct: 59  HKVYFDVEVSGKPIGRITMGLFGKTVPKTIENFRALCTG 97


>ref|XP_002878051.1| hypothetical protein ARALYDRAFT_486034 [Arabidopsis lyrata subsp.
           lyrata] gi|297323889|gb|EFH54310.1| hypothetical protein
           ARALYDRAFT_486034 [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  100 bits (248), Expect = 5e-19
 Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = -3

Query: 703 TGSKFFPVVVIWVLVLFGTLALILNRLSDFGDSSERE-VIGVKLNDEVKLLDGDSEGVTN 527
           T ++   + ++W++VLF TLALI  +L+D  D S  E ++  KLN     +  D EGVT+
Sbjct: 4   TATRLVSLTLLWIIVLFVTLALIQIKLTDVADPSVNEKILDAKLNQ----VGEDLEGVTH 59

Query: 526 KVYFDVEIGGKPMGRIVMGLFGKTVPLTTENFRALCTG 413
           KVYFD++I G P GRI++GLFGK VP T ENFRALCTG
Sbjct: 60  KVYFDIQINGSPAGRILIGLFGKIVPKTAENFRALCTG 97


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