BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002404
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314653.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
emb|CBI26363.3| unnamed protein product [Vitis vinifera]              162   1e-37
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   160   4e-37
ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II su...   157   3e-36
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...   152   1e-34

>ref|XP_002314653.1| predicted protein [Populus trichocarpa] gi|222863693|gb|EEF00824.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  194 bits (494), Expect = 2e-47
 Identities = 98/189 (51%), Positives = 134/189 (70%)
 Frame = +1

Query: 118 MLSEVECSCHVVVPLKDLDKNELVPQSLIITRLLKQMLNWKSTEEHGYFLAITKLKSIGS 297
           M  EVE    V +  ++LD+N LVPQ  I+T LLK +L+ K++++HGYFLA+T LKSIG 
Sbjct: 1   MFGEVEVCSTVRIIAENLDRNGLVPQRSIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGK 60

Query: 298 GEVEDSSRYILFPIIFHCRMFLPMNGEIMLGVVYRINRYGVFLRSGPINCVYLSAQKMSN 477
           GEV + S  +LF + F CR F+PM GEI+ GVV+R  R+GV LR GP+  ++LSA+KM N
Sbjct: 61  GEVVNKSGDVLFHVEFKCRTFMPMKGEILQGVVHRTFRHGVLLRCGPVKYIFLSARKMPN 120

Query: 478 YYYVDEENPFFLSNDLSRIENDVVIRFMVFGKRWTLKNRFVEREFMILATLESNCLGPIA 657
           Y Y  EENP FL+++L+RIEN+V++RF V   RW  K   + R+FM+LA+L  + LGPI+
Sbjct: 121 YQYTSEENPVFLNDELARIENNVLVRFSVLDVRWIEKMWDMRRDFMMLASLVGDSLGPIS 180

Query: 658 LPGYDGLAL 684
           L G D L L
Sbjct: 181 LCGSDELDL 189


>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  162 bits (410), Expect = 1e-37
 Identities = 84/183 (45%), Positives = 118/183 (64%)
 Frame = +1

Query: 109 KANMLSEVECSCHVVVPLKDLDKNELVPQSLIITRLLKQMLNWKSTEEHGYFLAITKLKS 288
           K  M  +V+   +V++P + LD   L+ Q  II RLL    N K+T+E GYFLA+T L++
Sbjct: 63  KTEMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLEN 122

Query: 289 IGSGEVEDSSRYILFPIIFHCRMFLPMNGEIMLGVVYRINRYGVFLRSGPINCVYLSAQK 468
           IG G+V   S  +LFP++F C  F    GEI+ GVV+++ ++GV LR GP+  +YLS QK
Sbjct: 123 IGEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQK 182

Query: 469 MSNYYYVDEENPFFLSNDLSRIENDVVIRFMVFGKRWTLKNRFVEREFMILATLESNCLG 648
           M +Y YV  ENP FL+  LS+IE DVV+RF+V G +W       EREF  L +LE + LG
Sbjct: 183 MPDYRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWL----EAEREFQALVSLEGDYLG 238

Query: 649 PIA 657
           P++
Sbjct: 239 PLS 241


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  160 bits (405), Expect = 4e-37
 Identities = 83/180 (46%), Positives = 117/180 (65%)
 Frame = +1

Query: 118 MLSEVECSCHVVVPLKDLDKNELVPQSLIITRLLKQMLNWKSTEEHGYFLAITKLKSIGS 297
           M  +V+   +V++P + LD   L+ Q  II RLL    N K+T+E GYFLA+T L++IG 
Sbjct: 1   MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60

Query: 298 GEVEDSSRYILFPIIFHCRMFLPMNGEIMLGVVYRINRYGVFLRSGPINCVYLSAQKMSN 477
           G+V   S  +LFP++F C  F    GEI+ GVV+++ ++GV LR GP+  +YLS QKM +
Sbjct: 61  GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120

Query: 478 YYYVDEENPFFLSNDLSRIENDVVIRFMVFGKRWTLKNRFVEREFMILATLESNCLGPIA 657
           Y YV  ENP FL+  LS+IE DVV+RF+V G +W       EREF  L +LE + LGP++
Sbjct: 121 YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWL----EAEREFQALVSLEGDYLGPLS 176


>ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449432630|ref|XP_004134102.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
           gi|449504102|ref|XP_004162253.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
           gi|449504105|ref|XP_004162254.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
          Length = 190

 Score =  157 bits (397), Expect = 3e-36
 Identities = 86/186 (46%), Positives = 120/186 (64%), Gaps = 1/186 (0%)
 Frame = +1

Query: 118 MLSEVECSCHVVVPLKDLDKNELVPQSLIITRLLKQMLNWKSTEEHGYFLAITKLKSIGS 297
           M  EVE    V + ++   ++    Q  IIT LL+ +L  K+ ++HGYFL++T L+SIG 
Sbjct: 1   MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLSVTSLRSIGK 60

Query: 298 GEVEDSSRYILFPIIFHCRMFLPMNGEIMLGVVYRINRYGVFLRSGPINCVYLSAQKMSN 477
           G V++ S+ + FPI F CR FLP  GEI+ GVV  I + G+ L+ GPI  V+LSA+KM  
Sbjct: 61  GIVKNESQCVSFPITFICRTFLPFEGEILHGVVRHIFQRGLLLKCGPIKYVFLSARKMPT 120

Query: 478 YYYVDEENPFFLSNDLSRIENDVVIRFMVFGKRWTLKNRFVEREFMILATLE-SNCLGPI 654
           Y YV  ENP F S + + I NDVV+RF V G RW  K   +++EF++LA+LE +N LGPI
Sbjct: 121 YQYVGGENPVFSSKEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPI 180

Query: 655 ALPGYD 672
           +L   D
Sbjct: 181 SLSDSD 186


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  152 bits (384), Expect = 1e-34
 Identities = 77/180 (42%), Positives = 119/180 (66%)
 Frame = +1

Query: 118 MLSEVECSCHVVVPLKDLDKNELVPQSLIITRLLKQMLNWKSTEEHGYFLAITKLKSIGS 297
           M  +V+   +V++  + LD   L+ Q  II RLL+   + K+T++ GY+LA+T L+SIG 
Sbjct: 1   MYLKVQLPWNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGE 60

Query: 298 GEVEDSSRYILFPIIFHCRMFLPMNGEIMLGVVYRINRYGVFLRSGPINCVYLSAQKMSN 477
           G+V + +  +LFP++F+   F    GEI+ GVV+++ ++GVF+R GPI  +YLS  KM +
Sbjct: 61  GKVREHTGDVLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPD 120

Query: 478 YYYVDEENPFFLSNDLSRIENDVVIRFMVFGKRWTLKNRFVEREFMILATLESNCLGPIA 657
           Y+YV  ENP FL++  S+IE DVV+RF+V G +W       EREF  L +LE + LGP++
Sbjct: 121 YHYVPGENPVFLNDKTSKIEKDVVVRFIVIGTKWL----EAEREFQALVSLEGDYLGPVS 176