BLASTX nr result

ID: Panax21_contig00002392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002392
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521275.1| 26S proteasome regulatory subunit S3, putati...   270   9e-71
sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome no...   270   1e-70
ref|XP_004144854.1| PREDICTED: probable 26S proteasome non-ATPas...   268   4e-70
emb|CBI37854.3| unnamed protein product [Vitis vinifera]              267   8e-70
ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPas...   267   8e-70

>ref|XP_002521275.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
           gi|223539543|gb|EEF41131.1| 26S proteasome regulatory
           subunit S3, putative [Ricinus communis]
          Length = 491

 Score =  270 bits (690), Expect = 9e-71
 Identities = 136/157 (86%), Positives = 142/157 (90%)
 Frame = +1

Query: 1   VSRLKNLNRRTVEVLASRLYFYYSLSYELTGDLAEIRGNLLALHRVATLRHDELGQETXX 180
           ++RLKNLNRRTV+VLASRLYFYYSLSYELTGDLAEIRGNLLALHR+ATLRHDELGQET  
Sbjct: 149 IARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAEIRGNLLALHRIATLRHDELGQETLL 208

Query: 181 XXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 360
                        DQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ
Sbjct: 209 NLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 268

Query: 361 AARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVFM 471
           AARK+PVAALGFRVQCNKWA+IVRLLLGEIPERTVFM
Sbjct: 269 AARKSPVAALGFRVQCNKWAIIVRLLLGEIPERTVFM 305


>sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit
           3; Short=26S proteasome subunit S3; AltName: Full=26S
           proteasome regulatory subunit RPN3; AltName:
           Full=Nuclear antigen 21D7
          Length = 489

 Score =  270 bits (689), Expect = 1e-70
 Identities = 137/157 (87%), Positives = 141/157 (89%)
 Frame = +1

Query: 1   VSRLKNLNRRTVEVLASRLYFYYSLSYELTGDLAEIRGNLLALHRVATLRHDELGQETXX 180
           ++R+KNLNRRTVEVLASRLYFYYSLSYELTGDLAEIRGNLLALHR+ATLRHDELGQET  
Sbjct: 147 IARVKNLNRRTVEVLASRLYFYYSLSYELTGDLAEIRGNLLALHRIATLRHDELGQETLL 206

Query: 181 XXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 360
                        DQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKES LQ
Sbjct: 207 NLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESXLQ 266

Query: 361 AARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVFM 471
           AARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVFM
Sbjct: 267 AARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVFM 303


>ref|XP_004144854.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
           3-like [Cucumis sativus]
          Length = 481

 Score =  268 bits (684), Expect = 4e-70
 Identities = 135/157 (85%), Positives = 141/157 (89%)
 Frame = +1

Query: 1   VSRLKNLNRRTVEVLASRLYFYYSLSYELTGDLAEIRGNLLALHRVATLRHDELGQETXX 180
           ++RLKNLNRRTV+VLASRLYFYYSLSYELTGDLAEIRGNLLALHR+ATLRHDELGQET  
Sbjct: 139 IARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAEIRGNLLALHRIATLRHDELGQETLL 198

Query: 181 XXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 360
                        DQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ
Sbjct: 199 NLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 258

Query: 361 AARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVFM 471
           AARKAP+AAL FRVQCNKWA+IVRLLLGEIPERTVFM
Sbjct: 259 AARKAPIAALRFRVQCNKWAIIVRLLLGEIPERTVFM 295


>emb|CBI37854.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  267 bits (682), Expect = 8e-70
 Identities = 135/157 (85%), Positives = 141/157 (89%)
 Frame = +1

Query: 1   VSRLKNLNRRTVEVLASRLYFYYSLSYELTGDLAEIRGNLLALHRVATLRHDELGQETXX 180
           ++RLKNLNRRT++VLASRLY YYSLSYELTGDLAEIRGNLLALHR+ATLRHDELGQET  
Sbjct: 145 ITRLKNLNRRTIDVLASRLYSYYSLSYELTGDLAEIRGNLLALHRIATLRHDELGQETLL 204

Query: 181 XXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 360
                        DQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ
Sbjct: 205 NLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 264

Query: 361 AARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVFM 471
           AARKAPV+ALGFRVQCNKWAVIVRLLLGEIPERTVFM
Sbjct: 265 AARKAPVSALGFRVQCNKWAVIVRLLLGEIPERTVFM 301


>ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3
           [Vitis vinifera]
          Length = 487

 Score =  267 bits (682), Expect = 8e-70
 Identities = 135/157 (85%), Positives = 141/157 (89%)
 Frame = +1

Query: 1   VSRLKNLNRRTVEVLASRLYFYYSLSYELTGDLAEIRGNLLALHRVATLRHDELGQETXX 180
           ++RLKNLNRRT++VLASRLY YYSLSYELTGDLAEIRGNLLALHR+ATLRHDELGQET  
Sbjct: 145 ITRLKNLNRRTIDVLASRLYSYYSLSYELTGDLAEIRGNLLALHRIATLRHDELGQETLL 204

Query: 181 XXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 360
                        DQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ
Sbjct: 205 NLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 264

Query: 361 AARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVFM 471
           AARKAPV+ALGFRVQCNKWAVIVRLLLGEIPERTVFM
Sbjct: 265 AARKAPVSALGFRVQCNKWAVIVRLLLGEIPERTVFM 301


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