BLASTX nr result

ID: Panax21_contig00002386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002386
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF70079.1| isochorismatase hydrolase family protein [Musa ac...   107   3e-22
ref|XP_002331086.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22
ref|XP_002336933.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22
ref|XP_002272282.1| PREDICTED: isochorismatase-like isoform 1 [V...   105   2e-21
ref|XP_002530911.1| Isochorismatase, putative [Ricinus communis]...   106   7e-21

>gb|ABF70079.1| isochorismatase hydrolase family protein [Musa acuminata]
          Length = 197

 Score =  107 bits (266), Expect(2) = 3e-22
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = -2

Query: 753 QATIDLCRRASVPVSFTRHSHKSPSDYGMLGEWWSNDLIIDGTPEANLMPEIGRRPGEEV 574
           ++T+ LCR A +PV FTRH H+SP+DY MLGEWWS DLI+DGTP A L+P+IGR PG+ V
Sbjct: 44  RSTVALCRAAGIPVLFTRHRHRSPADYAMLGEWWSGDLILDGTPAAELLPDIGRDPGDRV 103

Query: 573 VEKNTYS 553
           VEK+TYS
Sbjct: 104 VEKSTYS 110



 Score = 24.6 bits (52), Expect(2) = 3e-22
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -3

Query: 791 HFSSIADPILPSIK 750
           HF+SIA PILP+++
Sbjct: 31  HFASIAAPILPALR 44


>ref|XP_002331086.1| predicted protein [Populus trichocarpa] gi|222872814|gb|EEF09945.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  110 bits (275), Expect = 4e-22
 Identities = 51/66 (77%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -2

Query: 747 TIDLCRRASVPVSFTRHSHKSPSDYGMLGEWWSNDLIIDGTPEANLMPEIGRRPGE-EVV 571
           TIDLCRR+S+PV FTRH+HKSP DYGMLGEWW NDL++DGT EA LMPEI R  G+ EVV
Sbjct: 50  TIDLCRRSSIPVLFTRHNHKSPPDYGMLGEWWDNDLVLDGTVEAELMPEIRRLAGQNEVV 109

Query: 570 EKNTYS 553
           EKNTYS
Sbjct: 110 EKNTYS 115


>ref|XP_002336933.1| predicted protein [Populus trichocarpa] gi|222837171|gb|EEE75550.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  110 bits (275), Expect = 4e-22
 Identities = 51/66 (77%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -2

Query: 747 TIDLCRRASVPVSFTRHSHKSPSDYGMLGEWWSNDLIIDGTPEANLMPEIGRRPGE-EVV 571
           TIDLCRR+S+PV FTRH+HKSP DYGMLGEWW NDL++DGT EA LMPEI R  G+ EVV
Sbjct: 45  TIDLCRRSSIPVLFTRHNHKSPPDYGMLGEWWDNDLVLDGTVEAELMPEIRRLAGQNEVV 104

Query: 570 EKNTYS 553
           EKNTYS
Sbjct: 105 EKNTYS 110


>ref|XP_002272282.1| PREDICTED: isochorismatase-like isoform 1 [Vitis vinifera]
           gi|359484032|ref|XP_003633056.1| PREDICTED:
           isochorismatase-like isoform 2 [Vitis vinifera]
          Length = 198

 Score =  105 bits (263), Expect(2) = 2e-21
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = -2

Query: 747 TIDLCRRASVPVSFTRHSHKSPSDYGMLGEWWSNDLIIDGTPEANLMPEIGRRPGEEVVE 568
           TI LCRRAS+PV FTRHSHKSP+D+ MLGEWW  DLI+DGT EA LM EIGR P ++VVE
Sbjct: 48  TIALCRRASIPVIFTRHSHKSPADHAMLGEWWGGDLILDGTTEAELMSEIGRMPTDKVVE 107

Query: 567 KNTYS 553
           K TYS
Sbjct: 108 KTTYS 112



 Score = 23.1 bits (48), Expect(2) = 2e-21
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 791 HFSSIADPILPSI 753
           +FSSIA PI+P+I
Sbjct: 33  YFSSIAKPIIPAI 45


>ref|XP_002530911.1| Isochorismatase, putative [Ricinus communis]
           gi|223529505|gb|EEF31460.1| Isochorismatase, putative
           [Ricinus communis]
          Length = 202

 Score =  106 bits (264), Expect = 7e-21
 Identities = 51/68 (75%), Positives = 56/68 (82%), Gaps = 3/68 (4%)
 Frame = -2

Query: 747 TIDLCRRASVPVSFTRHSHKSPSDYGMLGEWWSNDLIIDGTPEANLMPEIGR---RPGEE 577
           TIDLCRRAS+PV FTRH HKSP+DYGMLGEWW+NDLIIDGT E+ L+PEI R       E
Sbjct: 49  TIDLCRRASIPVFFTRHRHKSPADYGMLGEWWNNDLIIDGTVESQLVPEIKRLVLGKDHE 108

Query: 576 VVEKNTYS 553
           VVEKNTYS
Sbjct: 109 VVEKNTYS 116


Top