BLASTX nr result

ID: Panax21_contig00002357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002357
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Viti...   245   1e-62
ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|2...   237   5e-60
ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-58
ref|XP_003520190.1| PREDICTED: F-box/LRR-repeat protein 17-like ...   222   2e-55
ref|XP_003536920.1| PREDICTED: F-box/LRR-repeat protein 17-like ...   218   2e-54

>ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Vitis vinifera]
           gi|297735494|emb|CBI17934.3| unnamed protein product
           [Vitis vinifera]
          Length = 574

 Score =  245 bits (626), Expect = 1e-62
 Identities = 128/192 (66%), Positives = 150/192 (78%), Gaps = 6/192 (3%)
 Frame = -3

Query: 966 SSISDSGIGMICNVFPNTLSRLLLALCPNTTSSGIQFATAQLPLLELMDYRMNVCDSNAQ 787
           SSISDSGIGMICNVFP TLSRLLLA+CPN +SSGIQFATAQLPLLELMD  M + D N+Q
Sbjct: 367 SSISDSGIGMICNVFPETLSRLLLAVCPNISSSGIQFATAQLPLLELMDCGMTISDPNSQ 426

Query: 786 DLPSEDNSDCELQKITNSKLHLMYQKLIIKHGRLKKLSLWGYSGLDALYLNCPG------ 625
             PSE+N DCE Q+++NSK+HL+YQKLIIKH RLKKLSLWG SGLDALYLNCP       
Sbjct: 427 GPPSEENIDCESQQVSNSKMHLIYQKLIIKHSRLKKLSLWGCSGLDALYLNCPELNDLNL 486

Query: 624 XXXXXXXXXXXLIQCPNMESVHASGCQDMLIDTIQN*VWDDMCASKNSFPFKRLADGSKR 445
                      L+QCPN+ESVHASGCQD+L+  I++ V ++  A +N FP KRLADGSKR
Sbjct: 487 NSCTNLHPERLLLQCPNLESVHASGCQDILVGAIESQV-NNGSAVENQFPSKRLADGSKR 545

Query: 444 VRVPHYLNQQVS 409
           VRVP++L+ Q S
Sbjct: 546 VRVPYFLSPQPS 557


>ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|222842529|gb|EEE80076.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  237 bits (604), Expect = 5e-60
 Identities = 127/201 (63%), Positives = 149/201 (74%), Gaps = 12/201 (5%)
 Frame = -3

Query: 981 YSKMR------SSISDSGIGMICNVFPNTLSRLLLALCPNTTSSGIQFATAQLPLLELMD 820
           YSK+       SSISDSGIGMICNVFP TLSRLLLALCPN TSSGIQFATAQLPLLELMD
Sbjct: 367 YSKLELLDLSGSSISDSGIGMICNVFPGTLSRLLLALCPNITSSGIQFATAQLPLLELMD 426

Query: 819 YRMNVCDSNAQDLPSEDNSDCELQKITNSKLHLMYQKLIIKHGRLKKLSLWGYSGLDALY 640
             M +CD ++Q   S+++ D ELQ    +KLHL+YQK+IIKH RLKKLSLWG SGLDALY
Sbjct: 427 CGMTICDLSSQYPTSDESGDFELQTTFKNKLHLIYQKVIIKHSRLKKLSLWGCSGLDALY 486

Query: 639 LNCPG------XXXXXXXXXXXLIQCPNMESVHASGCQDMLIDTIQN*VWDDMCASKNSF 478
           LNCP                  L+QCP++ESVHASGC ++LI+ IQ+ V ++  A +N F
Sbjct: 487 LNCPELIDLNLNSCKNLHPERVLLQCPSLESVHASGCHNLLIEGIQSQVSNNFAAMENQF 546

Query: 477 PFKRLADGSKRVRVPHYLNQQ 415
           P KRLADGSKRVRVP +L+QQ
Sbjct: 547 PNKRLADGSKRVRVPQFLSQQ 567


>ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|222857075|gb|EEE94622.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  231 bits (588), Expect = 4e-58
 Identities = 125/201 (62%), Positives = 146/201 (72%), Gaps = 12/201 (5%)
 Frame = -3

Query: 981 YSKMR------SSISDSGIGMICNVFPNTLSRLLLALCPNTTSSGIQFATAQLPLLELMD 820
           YSK+       SSISDSGIGMICNVFP TLSRLLLALCPN TSSGIQFATAQLPLLELMD
Sbjct: 367 YSKLELLDLSGSSISDSGIGMICNVFPGTLSRLLLALCPNITSSGIQFATAQLPLLELMD 426

Query: 819 YRMNVCDSNAQDLPSEDNSDCELQKITNSKLHLMYQKLIIKHGRLKKLSLWGYSGLDALY 640
             M +CD ++Q+   +++ D ELQ    +KLHL+YQKLIIKH RLKKLSLWG SGLDALY
Sbjct: 427 CGMTICDPSSQNPTCDESGDFELQMTFKNKLHLIYQKLIIKHSRLKKLSLWGCSGLDALY 486

Query: 639 LNCPG------XXXXXXXXXXXLIQCPNMESVHASGCQDMLIDTIQN*VWDDMCASKNSF 478
           LNCP                  L+QCP++ESVHASGC  +L   IQ+ V +++ A +N  
Sbjct: 487 LNCPELNDLNLNSCKNLHPERVLLQCPSLESVHASGCHRLLTGAIQSQVSNNLDAMENQS 546

Query: 477 PFKRLADGSKRVRVPHYLNQQ 415
           P KRLADGSKRVRVP +L+QQ
Sbjct: 547 PHKRLADGSKRVRVPLFLSQQ 567


>ref|XP_003520190.1| PREDICTED: F-box/LRR-repeat protein 17-like [Glycine max]
          Length = 590

 Score =  222 bits (565), Expect = 2e-55
 Identities = 116/190 (61%), Positives = 137/190 (72%), Gaps = 6/190 (3%)
 Frame = -3

Query: 966 SSISDSGIGMICNVFPNTLSRLLLALCPNTTSSGIQFATAQLPLLELMDYRMNVCDSNAQ 787
           S ISDSGI MICNVFP+TL+RLLLALCPN TSSGIQFAT QLP LE+MD  M +CD N Q
Sbjct: 381 SGISDSGISMICNVFPDTLTRLLLALCPNVTSSGIQFATFQLPHLEIMDCGMTICDPNMQ 440

Query: 786 DLPSEDNSDCELQKITNSKLHLMYQKLIIKHGRLKKLSLWGYSGLDALYLNCPG------ 625
           + P+ D ++C+LQK + S +H   QKLIIKH RLKKLSLWG +GLDALYLNCP       
Sbjct: 441 N-PTADENNCKLQKTSASNVHFTNQKLIIKHSRLKKLSLWGCTGLDALYLNCPRLIDLNL 499

Query: 624 XXXXXXXXXXXLIQCPNMESVHASGCQDMLIDTIQN*VWDDMCASKNSFPFKRLADGSKR 445
                      L+QCPN+E+VHASGCQDMLI  IQ+ V D     +N  P KRL DGSKR
Sbjct: 500 NSCSNLHPGRLLLQCPNLENVHASGCQDMLIGAIQSQVHDASADMENHSPSKRLPDGSKR 559

Query: 444 VRVPHYLNQQ 415
           +RVPH L+++
Sbjct: 560 IRVPHLLSEE 569


>ref|XP_003536920.1| PREDICTED: F-box/LRR-repeat protein 17-like [Glycine max]
          Length = 592

 Score =  218 bits (556), Expect = 2e-54
 Identities = 113/190 (59%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
 Frame = -3

Query: 966 SSISDSGIGMICNVFPNTLSRLLLALCPNTTSSGIQFATAQLPLLELMDYRMNVCDSNAQ 787
           S +SDSGI MICNVFP+TL+RLLLALCPN TSSGIQFAT QLP LE+MD  M +CD N +
Sbjct: 382 SGVSDSGISMICNVFPDTLTRLLLALCPNVTSSGIQFATFQLPHLEIMDCGMTICDPNTE 441

Query: 786 DLPSEDNSDCELQKITNSKLHLMYQKLIIKHGRLKKLSLWGYSGLDALYLNCPG------ 625
           + P+ D ++C LQK +   +HL+ QKLIIKH RLKKLSLWG +GLDALYLNCP       
Sbjct: 442 N-PTADENNCNLQKTSGVNVHLINQKLIIKHSRLKKLSLWGCTGLDALYLNCPRLIDLNL 500

Query: 624 XXXXXXXXXXXLIQCPNMESVHASGCQDMLIDTIQN*VWDDMCASKNSFPFKRLADGSKR 445
                      L+QCPN+E+VHASGCQDMLI  IQ+ V D     +N    KRL DGSKR
Sbjct: 501 NSCSNLHPGRLLLQCPNLENVHASGCQDMLIGAIQSQVHDASAEMENHSQSKRLPDGSKR 560

Query: 444 VRVPHYLNQQ 415
           +RVPH L+++
Sbjct: 561 IRVPHLLSEE 570


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