BLASTX nr result

ID: Panax21_contig00002352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002352
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|2...   100   7e-19
ref|XP_002279841.1| PREDICTED: uncharacterized protein LOC100253...   100   9e-19
ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
ref|XP_002511418.1| DNA binding protein, putative [Ricinus commu...    92   2e-16
ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811...    89   1e-15

>ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|222869157|gb|EEF06288.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  100 bits (248), Expect = 7e-19
 Identities = 49/78 (62%), Positives = 65/78 (83%)
 Frame = -2

Query: 236 ELREFGSSLEVVLISSGSQNNFMLPQVIILLQEEGTDVLSLSFSTVGDRVFHTLHTQVKF 57
           ELR+FGSS+EVVL+S G   NFM  +VI +L +EG +V+S S+STVGD+VFHT+H QV+ 
Sbjct: 101 ELRDFGSSIEVVLVS-GLNKNFMFYEVITVLSDEGAEVVSASYSTVGDKVFHTIHAQVRI 159

Query: 56  SRVGVDTSRIRQRLQELM 3
           SRVGV+TSR+ +RLQEL+
Sbjct: 160 SRVGVETSRVWERLQELI 177


>ref|XP_002279841.1| PREDICTED: uncharacterized protein LOC100253569 [Vitis vinifera]
           gi|297733800|emb|CBI15047.3| unnamed protein product
           [Vitis vinifera]
          Length = 178

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 52/78 (66%), Positives = 65/78 (83%)
 Frame = -2

Query: 236 ELREFGSSLEVVLISSGSQNNFMLPQVIILLQEEGTDVLSLSFSTVGDRVFHTLHTQVKF 57
           +LR+ GSSLEV+LIS G   NFML +VI +L+EEG +V+S S STVGD+VFH+LH QVK 
Sbjct: 101 DLRDLGSSLEVMLIS-GLNKNFMLYEVISVLEEEGAEVVSASVSTVGDKVFHSLHAQVKI 159

Query: 56  SRVGVDTSRIRQRLQELM 3
           SRVGV+TSR+ QRLQEL+
Sbjct: 160 SRVGVETSRVWQRLQELI 177


>ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|222859319|gb|EEE96866.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 49/78 (62%), Positives = 65/78 (83%)
 Frame = -2

Query: 236 ELREFGSSLEVVLISSGSQNNFMLPQVIILLQEEGTDVLSLSFSTVGDRVFHTLHTQVKF 57
           ELR+FGS++EVVLIS G   NFM  +VI +L +EG +V+S S+STVGD+VFHT+H QV+ 
Sbjct: 102 ELRDFGSTIEVVLIS-GLNKNFMFYEVINVLSDEGAEVISASYSTVGDKVFHTIHAQVRI 160

Query: 56  SRVGVDTSRIRQRLQELM 3
           SRVGV+TSR+ +RLQEL+
Sbjct: 161 SRVGVETSRVCERLQELI 178



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 26/34 (76%), Positives = 27/34 (79%)
 Frame = -2

Query: 878 LDRKTVERKRRCEMKGLCFKLTSLIPPHHFKPSK 777
           LDRKTVER RR  MK LC KL SL+PPH FKPSK
Sbjct: 11  LDRKTVERNRRIHMKDLCLKLASLLPPHLFKPSK 44


>ref|XP_002511418.1| DNA binding protein, putative [Ricinus communis]
           gi|223550533|gb|EEF52020.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 173

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 45/70 (64%), Positives = 59/70 (84%)
 Frame = -2

Query: 236 ELREFGSSLEVVLISSGSQNNFMLPQVIILLQEEGTDVLSLSFSTVGDRVFHTLHTQVKF 57
           ELR+ GSS+EV+LIS G + NFML +VI +++EEG +V+S SFSTVGD+VFH +H QVK 
Sbjct: 105 ELRDLGSSIEVILIS-GLKKNFMLYEVITIVEEEGAEVVSASFSTVGDKVFHIIHAQVKI 163

Query: 56  SRVGVDTSRI 27
           SRVGV+TSR+
Sbjct: 164 SRVGVETSRL 173



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 27/34 (79%), Positives = 27/34 (79%)
 Frame = -2

Query: 878 LDRKTVERKRRCEMKGLCFKLTSLIPPHHFKPSK 777
           LDRKTVER RR  MKGLCFKL SLIP HH K SK
Sbjct: 12  LDRKTVERNRRIHMKGLCFKLASLIPSHHLKHSK 45


>ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811485 [Glycine max]
          Length = 191

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 43/78 (55%), Positives = 63/78 (80%)
 Frame = -2

Query: 236 ELREFGSSLEVVLISSGSQNNFMLPQVIILLQEEGTDVLSLSFSTVGDRVFHTLHTQVKF 57
           E+++ GS +EV+LIS G   NFML +VI +L+EEG +V++ +FSTV D++F+T+H QVK 
Sbjct: 105 EIKDLGSGIEVMLIS-GLNKNFMLYEVISVLEEEGAEVVTANFSTVADKIFYTVHAQVKI 163

Query: 56  SRVGVDTSRIRQRLQELM 3
           SRVGV+ +R+ QRLQEL+
Sbjct: 164 SRVGVEPTRVYQRLQELI 181


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