BLASTX nr result

ID: Panax21_contig00002351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002351
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274463.1| PREDICTED: AP-1 complex subunit mu-1 [Vitis ...   371   e-100
ref|XP_002314604.1| predicted protein [Populus trichocarpa] gi|2...   367   3e-99
ref|XP_002527911.1| clathrin coat assembly protein ap-1, putativ...   363   4e-98
ref|XP_003613166.1| AP-1 complex subunit mu [Medicago truncatula...   363   7e-98
ref|XP_002511345.1| clathrin coat assembly protein ap-1, putativ...   362   9e-98

>ref|XP_002274463.1| PREDICTED: AP-1 complex subunit mu-1 [Vitis vinifera]
            gi|296083422|emb|CBI23375.3| unnamed protein product
            [Vitis vinifera]
          Length = 428

 Score =  371 bits (953), Expect = e-100
 Identities = 193/240 (80%), Positives = 198/240 (82%)
 Frame = +1

Query: 376  GMPECKLGLNDRVLLEAQGQSTKGKAIDLDDIKFHQCVRLARFENDRTISFVPPDGSFDL 555
            GMPECKLGLNDRVLLEAQG+STKGKAIDLDDIKFHQCVRLARFENDRTISF+PPDGSFDL
Sbjct: 208  GMPECKLGLNDRVLLEAQGRSTKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDL 267

Query: 556  MTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELXXXXXXXXXX 735
            MTYRLSTQVKPLIWVEAQVERHSRSR+EIMVKARSQFKERSTATNVEIEL          
Sbjct: 268  MTYRLSTQVKPLIWVEAQVERHSRSRIEIMVKARSQFKERSTATNVEIEL---------- 317

Query: 736  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPENDALLWKIKSFPGGKEYMLRAEFSLPSI 915
                                          PENDALLWKIKSFPGGKEYMLRAEFSLPSI
Sbjct: 318  ---------PVPSDATNPNIRTSMGSAAYAPENDALLWKIKSFPGGKEYMLRAEFSLPSI 368

Query: 916  TDEEAAPERKAPIRLKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLV 1095
            T EE APERKAPIR+KFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL+
Sbjct: 369  TAEEGAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI 428


>ref|XP_002314604.1| predicted protein [Populus trichocarpa] gi|222863644|gb|EEF00775.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  367 bits (943), Expect = 3e-99
 Identities = 190/240 (79%), Positives = 198/240 (82%)
 Frame = +1

Query: 376  GMPECKLGLNDRVLLEAQGQSTKGKAIDLDDIKFHQCVRLARFENDRTISFVPPDGSFDL 555
            GMPECKLGLNDRVLLEAQG++TKGKAIDL+DIKFHQCVRLARFENDRTISF+PPDG+FDL
Sbjct: 208  GMPECKLGLNDRVLLEAQGRATKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGAFDL 267

Query: 556  MTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELXXXXXXXXXX 735
            MTYRLSTQVKPLIWVEAQVERHSRSR+EIMVKARSQFKERSTATNVEIEL          
Sbjct: 268  MTYRLSTQVKPLIWVEAQVERHSRSRVEIMVKARSQFKERSTATNVEIEL---------- 317

Query: 736  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPENDALLWKIKSFPGGKEYMLRAEFSLPSI 915
                                          PENDALLWKIKSFPGGKEYMLRAEFSLPSI
Sbjct: 318  ---------PVSVDVSNPNIRTSMGSASYAPENDALLWKIKSFPGGKEYMLRAEFSLPSI 368

Query: 916  TDEEAAPERKAPIRLKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLV 1095
            T EEA PERKAPIR+KFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL+
Sbjct: 369  TAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI 428


>ref|XP_002527911.1| clathrin coat assembly protein ap-1, putative [Ricinus communis]
            gi|223532686|gb|EEF34468.1| clathrin coat assembly
            protein ap-1, putative [Ricinus communis]
          Length = 309

 Score =  363 bits (933), Expect = 4e-98
 Identities = 187/240 (77%), Positives = 197/240 (82%)
 Frame = +1

Query: 376  GMPECKLGLNDRVLLEAQGQSTKGKAIDLDDIKFHQCVRLARFENDRTISFVPPDGSFDL 555
            GMPECKLGLNDRVLLEAQG++TKGKAIDL+DIKFHQCVRLARFENDRTISF+PPDG+FDL
Sbjct: 89   GMPECKLGLNDRVLLEAQGRATKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGAFDL 148

Query: 556  MTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELXXXXXXXXXX 735
            MTYRLSTQVKPLIWVEAQVERHSRSR+EI VKARSQFKERSTATNVEIEL          
Sbjct: 149  MTYRLSTQVKPLIWVEAQVERHSRSRVEITVKARSQFKERSTATNVEIEL---------- 198

Query: 736  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPENDALLWKIKSFPGGKEYMLRAEFSLPSI 915
                                          PENDAL+WKIKSFPGGKEYM+RAEFSLPSI
Sbjct: 199  ---------PVPTDASNPNVRTSMGSASYAPENDALMWKIKSFPGGKEYMMRAEFSLPSI 249

Query: 916  TDEEAAPERKAPIRLKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLV 1095
            T EE APERKAPIR+KFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL+
Sbjct: 250  TAEEGAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI 309


>ref|XP_003613166.1| AP-1 complex subunit mu [Medicago truncatula]
            gi|355514501|gb|AES96124.1| AP-1 complex subunit mu
            [Medicago truncatula] gi|388506096|gb|AFK41114.1| unknown
            [Medicago truncatula]
          Length = 428

 Score =  363 bits (931), Expect = 7e-98
 Identities = 186/240 (77%), Positives = 197/240 (82%)
 Frame = +1

Query: 376  GMPECKLGLNDRVLLEAQGQSTKGKAIDLDDIKFHQCVRLARFENDRTISFVPPDGSFDL 555
            GMPECKLGLNDRVLLEAQG++TKGKAIDL+DIKFHQCVRLARFENDRTISF+PPDGSFDL
Sbjct: 208  GMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDL 267

Query: 556  MTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELXXXXXXXXXX 735
            MTYRLSTQVKPLIWVEA VE+HS+SR+EIMVKARSQFKERSTATNVEIEL          
Sbjct: 268  MTYRLSTQVKPLIWVEANVEKHSKSRIEIMVKARSQFKERSTATNVEIEL---------- 317

Query: 736  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPENDALLWKIKSFPGGKEYMLRAEFSLPSI 915
                                          PE DAL+WKI+SFPGGKEYMLRAEF LPSI
Sbjct: 318  ---------PVPVDATNPNVRTSMGSASYAPEKDALIWKIRSFPGGKEYMLRAEFRLPSI 368

Query: 916  TDEEAAPERKAPIRLKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLV 1095
            TDEEAAPERKAPIR+KFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL+
Sbjct: 369  TDEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI 428


>ref|XP_002511345.1| clathrin coat assembly protein ap-1, putative [Ricinus communis]
            gi|223550460|gb|EEF51947.1| clathrin coat assembly
            protein ap-1, putative [Ricinus communis]
          Length = 428

 Score =  362 bits (930), Expect = 9e-98
 Identities = 187/240 (77%), Positives = 195/240 (81%)
 Frame = +1

Query: 376  GMPECKLGLNDRVLLEAQGQSTKGKAIDLDDIKFHQCVRLARFENDRTISFVPPDGSFDL 555
            GMPECKLGLNDRVLLEAQG++TKGKAIDLDDIKFHQCVRLARFENDRTISF+PPDG+FDL
Sbjct: 208  GMPECKLGLNDRVLLEAQGRATKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGAFDL 267

Query: 556  MTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELXXXXXXXXXX 735
            MTYRLSTQVKPLIWVEAQVERHSRSR+E MVKARSQFKERSTATNVEIEL          
Sbjct: 268  MTYRLSTQVKPLIWVEAQVERHSRSRIEFMVKARSQFKERSTATNVEIEL---------- 317

Query: 736  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPENDALLWKIKSFPGGKEYMLRAEFSLPSI 915
                                          PENDAL+WKIKSFPG KEYMLRAEF LPSI
Sbjct: 318  ---------PVPSDATNPNIRSSMGSATYAPENDALVWKIKSFPGNKEYMLRAEFKLPSI 368

Query: 916  TDEEAAPERKAPIRLKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLV 1095
            T EEA PERKAPIR+KFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL+
Sbjct: 369  TAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI 428


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