BLASTX nr result

ID: Panax21_contig00002347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002347
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37019.3| unnamed protein product [Vitis vinifera]               62   4e-12
ref|XP_002512482.1| ATP-binding cassette transporter, putative [...    64   2e-11
ref|XP_002519313.1| ATP-binding cassette transporter, putative [...    64   5e-11
ref|XP_002316074.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-10
ref|XP_002333208.1| predicted protein [Populus trichocarpa] gi|2...    61   4e-10

>emb|CBI37019.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score = 61.6 bits (148), Expect(2) = 4e-12
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -2

Query: 110 ILSSEMIIGPSKVLFMDEISNGLDSSTTFQIVTCLQ 3
           I   EMI+GP+K LFMDEIS GLDSSTTFQIVTCLQ
Sbjct: 50  ISGGEMIVGPTKALFMDEISTGLDSSTTFQIVTCLQ 85



 Score = 34.3 bits (77), Expect(2) = 4e-12
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = -1

Query: 258 ASAIGGLKSTIQIDYILKVILLNRVQINNHLPMLFNRKILW 136
           A +I GLK ++Q DYILK+IL  + + + +L  +F  K LW
Sbjct: 3   AISINGLKRSLQTDYILKMILFTKCK-DQYLGWMFALKGLW 42


>ref|XP_002512482.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223548443|gb|EEF49934.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1458

 Score = 64.3 bits (155), Expect(2) = 2e-11
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 16/66 (24%)
 Frame = -2

Query: 152 IEKFYGLAICLDLLI----------------LSSEMIIGPSKVLFMDEISNGLDSSTTFQ 21
           I K  GL IC D ++                 + EMI+GP+K LFMDE+SNGLDSSTTFQ
Sbjct: 312 ILKILGLDICADTMVGDAMRRGISGGQKKRLTTGEMIVGPAKTLFMDEVSNGLDSSTTFQ 371

Query: 20  IVTCLQ 3
           IV+CLQ
Sbjct: 372 IVSCLQ 377



 Score = 29.3 bits (64), Expect(2) = 2e-11
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -1

Query: 258 ASAIGGLKSTIQIDYILKVILLN 190
           A +I GLKS IQ DYILK++ L+
Sbjct: 297 AVSIEGLKSNIQTDYILKILGLD 319


>ref|XP_002519313.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223541628|gb|EEF43177.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1393

 Score = 63.5 bits (153), Expect(2) = 5e-11
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 16/66 (24%)
 Frame = -2

Query: 152 IEKFYGLAICLDLLI----------------LSSEMIIGPSKVLFMDEISNGLDSSTTFQ 21
           I K  GL +C D ++                 + EMI+GP+K LFMDEISNGLDSSTTFQ
Sbjct: 314 ILKILGLDMCADTMVGDAMKRGISGGQKKRLTTGEMIVGPTKALFMDEISNGLDSSTTFQ 373

Query: 20  IVTCLQ 3
           IV+CLQ
Sbjct: 374 IVSCLQ 379



 Score = 28.5 bits (62), Expect(2) = 5e-11
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = -1

Query: 258 ASAIGGLKSTIQIDYILKVILLN 190
           A +I GLKS +Q DYILK++ L+
Sbjct: 299 AVSIEGLKSNLQTDYILKILGLD 321


>ref|XP_002316074.1| predicted protein [Populus trichocarpa] gi|222865114|gb|EEF02245.1|
           predicted protein [Populus trichocarpa]
          Length = 1455

 Score = 62.4 bits (150), Expect(2) = 1e-10
 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 16/66 (24%)
 Frame = -2

Query: 152 IEKFYGLAICLDLLI----------------LSSEMIIGPSKVLFMDEISNGLDSSTTFQ 21
           I K  GL IC D ++                 + EM++GP K LFMDEISNGLDSSTTFQ
Sbjct: 323 ILKILGLDICADTMVGDTMRRGISGGQKKRLSTGEMVVGPMKALFMDEISNGLDSSTTFQ 382

Query: 20  IVTCLQ 3
           IV+C+Q
Sbjct: 383 IVSCMQ 388



 Score = 28.1 bits (61), Expect(2) = 1e-10
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -1

Query: 258 ASAIGGLKSTIQIDYILKVILLN 190
           A ++ GLKS +Q DYILK++ L+
Sbjct: 308 AISVEGLKSNLQTDYILKILGLD 330


>ref|XP_002333208.1| predicted protein [Populus trichocarpa] gi|222835114|gb|EEE73549.1|
           predicted protein [Populus trichocarpa]
          Length = 1406

 Score = 60.8 bits (146), Expect(2) = 4e-10
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 16/66 (24%)
 Frame = -2

Query: 152 IEKFYGLAICLDLLI----------------LSSEMIIGPSKVLFMDEISNGLDSSTTFQ 21
           I K  GL IC D ++                 + EMI+GP++ LFMDEISNGLDSSTT Q
Sbjct: 323 ILKILGLDICADTMVGDAMRRGISGGQKKRLTTGEMIVGPTRALFMDEISNGLDSSTTLQ 382

Query: 20  IVTCLQ 3
           I++CLQ
Sbjct: 383 IISCLQ 388



 Score = 28.1 bits (61), Expect(2) = 4e-10
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -1

Query: 258 ASAIGGLKSTIQIDYILKVILLN 190
           A ++ GLKS +Q DYILK++ L+
Sbjct: 308 AISVEGLKSNLQTDYILKILGLD 330


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