BLASTX nr result

ID: Panax21_contig00002342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002342
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chlor...    75   4e-12
emb|CAN75145.1| hypothetical protein VITISV_033846 [Vitis vinifera]    75   4e-12
ref|XP_003566368.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...    69   3e-10
gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indi...    69   3e-10
ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group] g...    69   3e-10

>ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Vitis
           vinifera] gi|297736812|emb|CBI26013.3| unnamed protein
           product [Vitis vinifera]
          Length = 307

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/61 (60%), Positives = 41/61 (67%)
 Frame = +1

Query: 244 QGGMKRWGFSGMPASHGASLSHRSIGSISQRDAPGKDQRTDSNSSVTSGTGRKKRLTRSD 423
           QGGMKRWGF GMPASHGASLSHRSIGS  QRDAPGK         +    G K+R  ++ 
Sbjct: 177 QGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGK---VFKGKKMPGRMGGKQRTVKNV 233

Query: 424 W 426
           W
Sbjct: 234 W 234


>emb|CAN75145.1| hypothetical protein VITISV_033846 [Vitis vinifera]
          Length = 243

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/61 (60%), Positives = 41/61 (67%)
 Frame = +1

Query: 244 QGGMKRWGFSGMPASHGASLSHRSIGSISQRDAPGKDQRTDSNSSVTSGTGRKKRLTRSD 423
           QGGMKRWGF GMPASHGASLSHRSIGS  QRDAPGK         +    G K+R  ++ 
Sbjct: 125 QGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGK---VFKGKKMPGRMGGKQRTVKNV 181

Query: 424 W 426
           W
Sbjct: 182 W 182


>ref|XP_003566368.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L3-2,
           chloroplastic-like [Brachypodium distachyon]
          Length = 310

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = +1

Query: 247 GGMKRWGFSGMPASHGASLSHRSIGSISQRDAPGKDQRTDSNSSVTSGTGRKKRLTRSDW 426
           GGMKR GFSGMPASHGASLSHRSIGS  QRDAPG   R   N  +    G  +R  ++ W
Sbjct: 182 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPG---RVFKNRKMPGRMGGVQRTVKNVW 238


>gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indica Group]
          Length = 319

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = +1

Query: 247 GGMKRWGFSGMPASHGASLSHRSIGSISQRDAPGKDQRTDSNSSVTSGTGRKKRLTRSDW 426
           GGMKR GFSGMPASHGASLSHRSIGS  QRDAPG   R   N  +    G  +R  ++ W
Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPG---RVFKNRKMPGRMGGVQRTVKNVW 249


>ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group]
           gi|7106521|dbj|BAA92206.1| putative ribosomal protein L3
           [Oryza sativa Japonica Group]
           gi|113532130|dbj|BAF04513.1| Os01g0251100 [Oryza sativa
           Japonica Group] gi|215678787|dbj|BAG95224.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215707174|dbj|BAG93634.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222618109|gb|EEE54241.1| hypothetical protein
           OsJ_01115 [Oryza sativa Japonica Group]
          Length = 319

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = +1

Query: 247 GGMKRWGFSGMPASHGASLSHRSIGSISQRDAPGKDQRTDSNSSVTSGTGRKKRLTRSDW 426
           GGMKR GFSGMPASHGASLSHRSIGS  QRDAPG   R   N  +    G  +R  ++ W
Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPG---RVFKNRKMPGRMGGVQRTVKNVW 249


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