BLASTX nr result

ID: Panax21_contig00002328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002328
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crys...   335   1e-89
ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   324   2e-86
ref|XP_002526974.1| copine, putative [Ricinus communis] gi|22353...   319   1e-84
ref|XP_003618769.1| E3 ubiquitin-protein ligase RGLG2 [Medicago ...   318   2e-84
ref|XP_003524729.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   316   6e-84

>gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crystallinum]
          Length = 472

 Score =  335 bits (860), Expect = 1e-89
 Identities = 159/180 (88%), Positives = 175/180 (97%)
 Frame = -3

Query: 541 PTHAPHRKLDRRYSRIADNYNSLEEVTEALARAGLESSNLIVGIDFTKSNEWTGAKSFNR 362
           PTH P ++LDRRYSRIAD+Y+SL++VTEALA AGLESSNLIVGIDFTKSNEWTGAKSFNR
Sbjct: 73  PTHEPKKRLDRRYSRIADDYSSLDQVTEALAHAGLESSNLIVGIDFTKSNEWTGAKSFNR 132

Query: 361 RSLHHIGDGLNPYEQAITIIGKTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEDGRFCN 182
           +SLHHIGDGLNPY+QAI IIGKTLAAFD+DNLIPCYGFGDASTHDQDVFSFYP++GR+CN
Sbjct: 133 KSLHHIGDGLNPYQQAIAIIGKTLAAFDDDNLIPCYGFGDASTHDQDVFSFYPDEGRYCN 192

Query: 181 GFEEVLSRYREIVPHIRLAGPTSFAPVVEMATTIVEQSGGQYHVLVIIADGQVTRSVDTE 2
           GFEEVLSRYREIVP++RLAGPTSFAPV+EMA TIVEQSGGQYHVL+IIADGQVTRSVDTE
Sbjct: 193 GFEEVLSRYREIVPNLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTE 252


>ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 447

 Score =  324 bits (831), Expect = 2e-86
 Identities = 156/174 (89%), Positives = 169/174 (97%)
 Frame = -3

Query: 523 RKLDRRYSRIADNYNSLEEVTEALARAGLESSNLIVGIDFTKSNEWTGAKSFNRRSLHHI 344
           R+LDRRYSRIADNYNSLEEVTEALARAGLESSNLIVGIDFTKSNEWTGA+SFNRRSLHHI
Sbjct: 63  RRLDRRYSRIADNYNSLEEVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHI 122

Query: 343 GDGLNPYEQAITIIGKTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEDGRFCNGFEEVL 164
           GD  NPY+QAI+IIGKTLAAFD+DNLIPC+GFGDASTHDQDVFSF+PE+ RFCNGFEEVL
Sbjct: 123 GDQPNPYQQAISIIGKTLAAFDDDNLIPCFGFGDASTHDQDVFSFFPEEERFCNGFEEVL 182

Query: 163 SRYREIVPHIRLAGPTSFAPVVEMATTIVEQSGGQYHVLVIIADGQVTRSVDTE 2
           +RY+EI PH+RLAGPTSFAPV+EMA TIVEQSGGQYHVL+IIADGQVTRSVDTE
Sbjct: 183 NRYQEIAPHLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTE 236


>ref|XP_002526974.1| copine, putative [Ricinus communis] gi|223533726|gb|EEF35461.1|
           copine, putative [Ricinus communis]
          Length = 461

 Score =  319 bits (817), Expect = 1e-84
 Identities = 155/173 (89%), Positives = 169/173 (97%)
 Frame = -3

Query: 523 RKLDRRYSRIADNYNSLEEVTEALARAGLESSNLIVGIDFTKSNEWTGAKSFNRRSLHHI 344
           R+LDRRYSRIAD+Y SL++VTEALA+AGLESSNLIVGIDFTKSNEWTGA+S+NRRSLHHI
Sbjct: 86  RQLDRRYSRIADDYKSLDQVTEALAQAGLESSNLIVGIDFTKSNEWTGARSYNRRSLHHI 145

Query: 343 GDGLNPYEQAITIIGKTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEDGRFCNGFEEVL 164
           GDGLNPYEQAI+IIGKTLAAFDEDNLIPC+GFGDASTHDQDVF FYP D RFCNGFEEVL
Sbjct: 146 GDGLNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTHDQDVFCFYP-DERFCNGFEEVL 204

Query: 163 SRYREIVPHIRLAGPTSFAPVVEMATTIVEQSGGQYHVLVIIADGQVTRSVDT 5
           SRYREIVP++RLAGPTSFAP++EMATTIVEQSGGQYHVL+IIADGQVTRSVDT
Sbjct: 205 SRYREIVPNLRLAGPTSFAPIIEMATTIVEQSGGQYHVLLIIADGQVTRSVDT 257


>ref|XP_003618769.1| E3 ubiquitin-protein ligase RGLG2 [Medicago truncatula]
           gi|355493784|gb|AES74987.1| E3 ubiquitin-protein ligase
           RGLG2 [Medicago truncatula]
          Length = 486

 Score =  318 bits (814), Expect = 2e-84
 Identities = 156/180 (86%), Positives = 168/180 (93%)
 Frame = -3

Query: 541 PTHAPHRKLDRRYSRIADNYNSLEEVTEALARAGLESSNLIVGIDFTKSNEWTGAKSFNR 362
           P H   RKLDR+YSRIADNYNS++EVTEALARAGLESSNLI+GIDFTKSNEWTG  SFNR
Sbjct: 89  PRHDYQRKLDRKYSRIADNYNSIDEVTEALARAGLESSNLILGIDFTKSNEWTGKHSFNR 148

Query: 361 RSLHHIGDGLNPYEQAITIIGKTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEDGRFCN 182
           +SLHHIG+G NPYEQAI+IIGKTLAAFDEDNLIPC+GFGDASTHDQDVFSFYP D R CN
Sbjct: 149 KSLHHIGNGPNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTHDQDVFSFYP-DERICN 207

Query: 181 GFEEVLSRYREIVPHIRLAGPTSFAPVVEMATTIVEQSGGQYHVLVIIADGQVTRSVDTE 2
           GFEEVLSRYREIVP+I+LAGPTSFAP+VE A TIVEQSGGQYHVLVIIADGQVTRS+DTE
Sbjct: 208 GFEEVLSRYREIVPNIKLAGPTSFAPIVETAMTIVEQSGGQYHVLVIIADGQVTRSIDTE 267


>ref|XP_003524729.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 491

 Score =  316 bits (810), Expect = 6e-84
 Identities = 153/179 (85%), Positives = 169/179 (94%)
 Frame = -3

Query: 538 THAPHRKLDRRYSRIADNYNSLEEVTEALARAGLESSNLIVGIDFTKSNEWTGAKSFNRR 359
           +H   ++LDR+YSRIADNYNS++EVTEALA AGLESSNLI+GIDFTKSNEWTG  SFNR+
Sbjct: 83  SHRNEKRLDRKYSRIADNYNSIDEVTEALAHAGLESSNLILGIDFTKSNEWTGKHSFNRK 142

Query: 358 SLHHIGDGLNPYEQAITIIGKTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEDGRFCNG 179
           SLHHIG+G NPYEQAI+IIGKTLAAFDEDNLIPC+GFGDASTHDQDVFSFYP D RFCNG
Sbjct: 143 SLHHIGNGPNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTHDQDVFSFYP-DERFCNG 201

Query: 178 FEEVLSRYREIVPHIRLAGPTSFAPVVEMATTIVEQSGGQYHVLVIIADGQVTRSVDTE 2
           FEEVLS+YREIVP+IRLAGPTSFAP+VEMA TIVEQSGGQYHVLVI+ADGQVTRS+DTE
Sbjct: 202 FEEVLSQYREIVPNIRLAGPTSFAPIVEMAMTIVEQSGGQYHVLVIVADGQVTRSIDTE 260


Top