BLASTX nr result

ID: Panax21_contig00002327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002327
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   246   1e-63
ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|2...   245   3e-63
ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   241   5e-62
dbj|BAH19894.1| AT5G14420 [Arabidopsis thaliana]                      241   6e-62
ref|NP_196946.1| E3 ubiquitin-protein ligase RGLG2 [Arabidopsis ...   241   6e-62

>ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 447

 Score =  246 bits (628), Expect = 1e-63
 Identities = 117/132 (88%), Positives = 127/132 (96%)
 Frame = -1

Query: 398 CFGFGDASTHDQDVFSFSPEDDRFCNGFEEVLSRYKEIVPHLRLAGPTSFAPVIEMAMTI 219
           CFGFGDASTHDQDVFSF PE++RFCNGFEEVL+RY+EI PHLRLAGPTSFAPVIEMAMTI
Sbjct: 151 CFGFGDASTHDQDVFSFFPEEERFCNGFEEVLNRYQEIAPHLRLAGPTSFAPVIEMAMTI 210

Query: 218 VEQSGGQYHVLVIIADGQVTRSVDTEHGLLSPQEQKTVEAIVKASELPLSIILVGVGDGP 39
           VEQSGGQYHVL+IIADGQVTRSVDTE G LSPQEQKTV+AIV+AS+ PLSI+LVGVGDGP
Sbjct: 211 VEQSGGQYHVLLIIADGQVTRSVDTERGRLSPQEQKTVDAIVEASKFPLSIVLVGVGDGP 270

Query: 38  WEMMREFDDNIP 3
           W+MMREFDDNIP
Sbjct: 271 WDMMREFDDNIP 282


>ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|222845815|gb|EEE83362.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  245 bits (625), Expect = 3e-63
 Identities = 120/132 (90%), Positives = 128/132 (96%)
 Frame = -1

Query: 398 CFGFGDASTHDQDVFSFSPEDDRFCNGFEEVLSRYKEIVPHLRLAGPTSFAPVIEMAMTI 219
           CFGFGDASTHDQDVFSF P D+RFCNGFEEVLSRY+EIVP+LRLAGPTSFAP+IEMAMTI
Sbjct: 89  CFGFGDASTHDQDVFSFYP-DERFCNGFEEVLSRYREIVPNLRLAGPTSFAPIIEMAMTI 147

Query: 218 VEQSGGQYHVLVIIADGQVTRSVDTEHGLLSPQEQKTVEAIVKASELPLSIILVGVGDGP 39
           VEQS GQYHVL+IIADGQVTRSVDTEHG LSPQEQKTVEAIV+AS+LPLSIILVGVGDGP
Sbjct: 148 VEQSAGQYHVLLIIADGQVTRSVDTEHGQLSPQEQKTVEAIVQASKLPLSIILVGVGDGP 207

Query: 38  WEMMREFDDNIP 3
           W+MMREFDDNIP
Sbjct: 208 WDMMREFDDNIP 219


>ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
           gi|296087586|emb|CBI34842.3| unnamed protein product
           [Vitis vinifera]
          Length = 461

 Score =  241 bits (615), Expect = 5e-62
 Identities = 119/132 (90%), Positives = 125/132 (94%)
 Frame = -1

Query: 398 CFGFGDASTHDQDVFSFSPEDDRFCNGFEEVLSRYKEIVPHLRLAGPTSFAPVIEMAMTI 219
           CFGFGDASTHDQDVFSF  ED+RFCNGFEEVLSRY+EIVP LRLAGPTSFAP+IEMAMTI
Sbjct: 172 CFGFGDASTHDQDVFSFY-EDERFCNGFEEVLSRYREIVPRLRLAGPTSFAPIIEMAMTI 230

Query: 218 VEQSGGQYHVLVIIADGQVTRSVDTEHGLLSPQEQKTVEAIVKASELPLSIILVGVGDGP 39
           V  SGGQYHVLVIIADGQVTRSVDT HG LSPQEQKTVEAIV+AS+LPLSIILVGVGDGP
Sbjct: 231 VNHSGGQYHVLVIIADGQVTRSVDTAHGQLSPQEQKTVEAIVEASKLPLSIILVGVGDGP 290

Query: 38  WEMMREFDDNIP 3
           W+MMREFDDNIP
Sbjct: 291 WDMMREFDDNIP 302


>dbj|BAH19894.1| AT5G14420 [Arabidopsis thaliana]
          Length = 468

 Score =  241 bits (614), Expect = 6e-62
 Identities = 117/132 (88%), Positives = 128/132 (96%)
 Frame = -1

Query: 398 CFGFGDASTHDQDVFSFSPEDDRFCNGFEEVLSRYKEIVPHLRLAGPTSFAPVIEMAMTI 219
           C+GFGDASTHDQDVFSF+ ED RFCNGFEEVLSRYKEIVP L+LAGPTSFAP+I+MAMTI
Sbjct: 178 CYGFGDASTHDQDVFSFNSED-RFCNGFEEVLSRYKEIVPQLKLAGPTSFAPIIDMAMTI 236

Query: 218 VEQSGGQYHVLVIIADGQVTRSVDTEHGLLSPQEQKTVEAIVKASELPLSIILVGVGDGP 39
           VEQSGGQYHVLVIIADGQVTRSVDTE+G LSPQEQKTV+AIV+AS+LPLSI+LVGVGDGP
Sbjct: 237 VEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGP 296

Query: 38  WEMMREFDDNIP 3
           W+MMREFDDNIP
Sbjct: 297 WDMMREFDDNIP 308


>ref|NP_196946.1| E3 ubiquitin-protein ligase RGLG2 [Arabidopsis thaliana]
           gi|30684895|ref|NP_850818.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana]
           gi|42573365|ref|NP_974779.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana]
           gi|42573367|ref|NP_974780.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana]
           gi|75181029|sp|Q9LY87.1|RGLG2_ARATH RecName: Full=E3
           ubiquitin-protein ligase RGLG2; AltName: Full=RING
           domain ligase 2 gi|7573467|emb|CAB87781.1| putative
           protein [Arabidopsis thaliana]
           gi|20466262|gb|AAM20448.1| putative protein [Arabidopsis
           thaliana] gi|23198082|gb|AAN15568.1| putative protein
           [Arabidopsis thaliana] gi|70905105|gb|AAZ14078.1|
           At5g14420 [Arabidopsis thaliana]
           gi|332004645|gb|AED92028.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana] gi|332004646|gb|AED92029.1|
           E3 ubiquitin-protein ligase RGLG2 [Arabidopsis thaliana]
           gi|332004647|gb|AED92030.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana] gi|332004648|gb|AED92031.1|
           E3 ubiquitin-protein ligase RGLG2 [Arabidopsis thaliana]
          Length = 468

 Score =  241 bits (614), Expect = 6e-62
 Identities = 117/132 (88%), Positives = 128/132 (96%)
 Frame = -1

Query: 398 CFGFGDASTHDQDVFSFSPEDDRFCNGFEEVLSRYKEIVPHLRLAGPTSFAPVIEMAMTI 219
           C+GFGDASTHDQDVFSF+ ED RFCNGFEEVLSRYKEIVP L+LAGPTSFAP+I+MAMTI
Sbjct: 178 CYGFGDASTHDQDVFSFNSED-RFCNGFEEVLSRYKEIVPQLKLAGPTSFAPIIDMAMTI 236

Query: 218 VEQSGGQYHVLVIIADGQVTRSVDTEHGLLSPQEQKTVEAIVKASELPLSIILVGVGDGP 39
           VEQSGGQYHVLVIIADGQVTRSVDTE+G LSPQEQKTV+AIV+AS+LPLSI+LVGVGDGP
Sbjct: 237 VEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGP 296

Query: 38  WEMMREFDDNIP 3
           W+MMREFDDNIP
Sbjct: 297 WDMMREFDDNIP 308


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